FFCP PHASE1:Mm9::chr2:119062941..119062953,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20732 | |EntrezGene=20732 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q9R097 | |UniProt=Q9R097 | ||
|association_with_transcript=-142bp_to_NM_016907,uc008ltk.1_5end | |association_with_transcript=-142bp_to_NM_016907,uc008ltk.1_5end | ||
|cluster_id=chr2:119062941..119062953,+ | |||
|description=CAGE_peak_10_at_Spint1_5end | |description=CAGE_peak_10_at_Spint1_5end | ||
|id=chr2:119062941..119062953,+ | |id=chr2:119062941..119062953,+ | ||
|ontology_enrichment_celltype=CL:0000063!1.43e-12!66;CL:0002563!1.57e-11!9;CL:0002251!1.57e-11!9;CL:0000066!3.84e-11!25;CL:0000075!1.85e-09!7;CL:0002076!1.24e-08!15;CL:0000239!1.52e-08!6;CL:0000677!1.52e-08!6;CL:0000212!1.52e-08!6;CL:0000584!1.52e-08!6;CL:0000223!5.87e-07!20;CL:0000144!6.35e-07!121;CL:0000012!6.35e-07!121;CL:0002371!6.72e-07!118 | |ontology_enrichment_celltype=CL:0000063!1.43e-12!66;CL:0002563!1.57e-11!9;CL:0002251!1.57e-11!9;CL:0000066!3.84e-11!25;CL:0000075!1.85e-09!7;CL:0002076!1.24e-08!15;CL:0000239!1.52e-08!6;CL:0000677!1.52e-08!6;CL:0000212!1.52e-08!6;CL:0000584!1.52e-08!6;CL:0000223!5.87e-07!20;CL:0000144!6.35e-07!121;CL:0000012!6.35e-07!121;CL:0002371!6.72e-07!118 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.23e-23,9;CL:0002251,5.23e-23,9;CL:0000066,2.07e-19,25;CL:0000239,1.20e-18,6;CL:0000677,1.20e-18,6;CL:0000584,1.20e-18,6;CL:0000075,5.84e-16,7;CL:0000473,2.35e-15,7;CL:0000682,4.02e-14,3;CL:0002076,1.66e-13,15;CL:0000223,7.89e-13,20;CL:0002476,4.32e-09,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.44e-18!15;UBERON:0001242!7.01e-16!13;UBERON:0000060!7.01e-16!13;UBERON:0001262!7.01e-16!13;UBERON:0004786!7.01e-16!13;UBERON:0000485!7.10e-13!11;UBERON:0003350!1.57e-11!9;UBERON:0004808!1.57e-11!9;UBERON:0001277!1.57e-11!9;UBERON:0000160!5.06e-11!43;UBERON:0004923!1.19e-10!24;UBERON:0005409!1.04e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.73e-39,15;UBERON:0001242,8.15e-32,13;UBERON:0001262,8.15e-32,13;UBERON:0004786,8.15e-32,13;UBERON:0004923,5.73e-24,24;UBERON:0003350,5.23e-23,9;UBERON:0004808,5.23e-23,9;UBERON:0001277,5.23e-23,9;UBERON:0000485,1.08e-18,11;UBERON:0000160,3.67e-15,31;UBERON:0000331,1.77e-13,3;UBERON:0002116,1.77e-13,3;UBERON:0001204,1.77e-13,3;UBERON:0001168,1.77e-13,3;UBERON:0002108,3.08e-10,4;UBERON:0001962,1.81e-09,2;UBERON:0001961,1.81e-09,2;UBERON:0001744,1.81e-09,2;UBERON:0005409,2.18e-09,47 | |||
|phase1_expression=0.160148847104794,16.40184415905,10.4649825059593,6.95667686005709,14.5259761684441,1.6787927191189,0.934450562382103,0.129123323441576,0.422366166455,1.17032263160997,0.513653904676515,0.319088635981346,0,0.437102012094987,0,0.202475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0,0.0850432901510698,0,0.261199789138935,3.51983330145495,3.44113921600755,7.46501553349526,13.7843838770904,5.817723282519,6.46079626151671,6.30075324399827,1.33038306393183,0,0,0,0.577703239502549,1.99481574430191,1.02084678131185,0.418531630736908,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.226714680320357,1.73918693221007,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.760079596425296,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,0.255457055208591,0.718890747035522,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0.432276099749388,0.796565093017469,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,3.01582567878545,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.648074866458964,0,0.56369293868419,0,0,0,0,0,0,0,0,0.483168241652012,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.269141569828427,1.00730769818447,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0.68741272937475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,16.40184415905,10.4649825059593,6.95667686005709,14.5259761684441,1.6787927191189,0.934450562382103,0.129123323441576,0.422366166455,1.17032263160997,0.513653904676515,0.319088635981346,0,0.437102012094987,0,0.202475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0,0.0850432901510698,0,0.261199789138935,3.51983330145495,3.44113921600755,7.46501553349526,13.7843838770904,5.817723282519,6.46079626151671,6.30075324399827,1.33038306393183,0,0,0,0.577703239502549,1.99481574430191,1.02084678131185,0.418531630736908,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.226714680320357,1.73918693221007,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.760079596425296,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,0.255457055208591,0.718890747035522,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0.432276099749388,0.796565093017469,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,3.01582567878545,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.648074866458964,0,0.56369293868419,0,0,0,0,0,0,0,0,0.483168241652012,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.269141569828427,1.00730769818447,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0.68741272937475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@Spint1 | |short_description=p10@Spint1 | ||
}} | }} |
Latest revision as of 14:03, 25 September 2015
Short description: | p10@Spint1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Spint1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -142bp_to_NM_016907, uc008ltk.1_5end |
EntrezGene: | Spint1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.23e-23 | 9 |
epithelial cell of alimentary canal | 5.23e-23 | 9 |
epithelial cell | 2.07e-19 | 25 |
brush border epithelial cell | 1.20e-18 | 6 |
gut absorptive cell | 1.20e-18 | 6 |
enterocyte | 1.20e-18 | 6 |
columnar/cuboidal epithelial cell | 5.84e-16 | 7 |
defensive cell | 2.35e-15 | 7 |
M cell of gut | 4.02e-14 | 3 |
endo-epithelial cell | 1.66e-13 | 15 |
endodermal cell | 7.89e-13 | 20 |
bone marrow macrophage | 4.32e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.73e-39 | 15 |
intestinal mucosa | 8.15e-32 | 13 |
wall of intestine | 8.15e-32 | 13 |
gastrointestinal system mucosa | 8.15e-32 | 13 |
organ component layer | 5.73e-24 | 24 |
epithelium of mucosa | 5.23e-23 | 9 |
gastrointestinal system epithelium | 5.23e-23 | 9 |
intestinal epithelium | 5.23e-23 | 9 |
simple columnar epithelium | 1.08e-18 | 11 |
intestine | 3.67e-15 | 31 |
ileal mucosa | 1.77e-13 | 3 |
ileum | 1.77e-13 | 3 |
mucosa of small intestine | 1.77e-13 | 3 |
wall of small intestine | 1.77e-13 | 3 |
small intestine | 3.08e-10 | 4 |
gut-associated lymphoid tissue | 1.81e-09 | 2 |
mucosa-associated lymphoid tissue | 1.81e-09 | 2 |
lymphoid tissue | 1.81e-09 | 2 |
gastrointestinal system | 2.18e-09 | 47 |