FFCP PHASE1:Mm9::chr2:72018044..72018106,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56508 | |EntrezGene=56508 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=294bp_to_ENSMUST00000153887_5end | |association_with_transcript=294bp_to_ENSMUST00000153887_5end | ||
|cluster_id=chr2:72018044..72018106,+ | |||
|description=CAGE_peak_2_at_Rapgef4_5end | |description=CAGE_peak_2_at_Rapgef4_5end | ||
|id=chr2:72018044..72018106,+ | |id=chr2:72018044..72018106,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.69e-08,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.89e-20!22;UBERON:0007499!1.89e-20!22;UBERON:0006925!1.89e-20!22;UBERON:0009497!1.89e-20!22;UBERON:0000015!1.89e-20!22;UBERON:0002423!1.89e-20!22;UBERON:0006235!1.89e-20!22;UBERON:0008835!1.89e-20!22;UBERON:0003894!1.89e-20!22;UBERON:0004161!1.89e-20!22;UBERON:0008836!1.89e-20!22;UBERON:0009854!4.17e-19!23;UBERON:0009856!4.17e-19!23;UBERON:0002365!5.05e-18!25;UBERON:0002330!5.05e-18!25;UBERON:0005172!4.58e-11!49;UBERON:0005173!4.58e-11!49;UBERON:0002417!4.58e-11!49;UBERON:0000916!4.58e-11!49;UBERON:0005256!1.84e-10!47;UBERON:0002368!2.54e-07!60;UBERON:0009569!2.91e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.62e-31,22;UBERON:0007499,1.62e-31,22;UBERON:0006925,1.62e-31,22;UBERON:0009497,1.62e-31,22;UBERON:0000015,1.62e-31,22;UBERON:0002423,1.62e-31,22;UBERON:0006235,1.62e-31,22;UBERON:0008835,1.62e-31,22;UBERON:0003894,1.62e-31,22;UBERON:0004161,1.62e-31,22;UBERON:0008836,1.62e-31,22;UBERON:0009854,8.08e-30,23;UBERON:0009856,8.08e-30,23;UBERON:0002365,7.82e-27,25;UBERON:0002330,7.82e-27,25;UBERON:0005256,1.15e-16,45;UBERON:0005172,1.20e-14,49;UBERON:0005173,1.20e-14,49;UBERON:0002417,1.20e-14,49;UBERON:0000916,1.20e-14,49;UBERON:0003914,5.83e-11,47;UBERON:0002368,1.53e-10,60;UBERON:0003104,3.03e-10,61;UBERON:0009142,3.03e-10,61;UBERON:0002530,3.69e-09,65;UBERON:0009569,6.55e-09,66;UBERON:0003929,2.00e-08,55;UBERON:0000949,2.84e-08,72;UBERON:0005177,6.69e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.893811366596314,0.307213066512487,0,0,0,0,0.56276261003168,0.30559649555362,0.589257170947335,0,0,0,0,2.02905142091174,175.526470904203,55.0776780303278,194.832852181252,499.678065017258,487.453253161901,44.2399923415018,0,0,0,0,0,0,0,0,0,0,84.4960709921044,0,1.7813056687779,0.173485326766136,0.608930956624282,1.15307748628029,0.904335843315735,4.23319345688537,1.13099932196708,0,0.433798070759735,0,0.161766849947409,0,0,0,0,1.25668024088073,0,0,0,0,0.299581278809645,0.457500602818626,0,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,2.10986744970001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0.232236671860439,0.128867461322093,0,0,0.570676878337677,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0.571242563048644,0,0,0,0.210407459670956,0,0,0,0,321.947553016644,2.00214126859313,3.73462090715086,8.31989815823959,9.94014594803664,11.576503668116,17.8238096246994,35.0989287689989,151.110031354333,72.7587744948416,73.3217853289508,85.2202770160873,87.370548472077,161.650481886152,199.131129009323,270.168371963486,0.184753190166605,0,0,0,0.234690248288502,0,0.476087281772027,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,1.42598951353889,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0.406638934253697,0,0,0.436725127492355,2.02296519577231,7.85207829390691,0,0,0,0,0,0,0,0.129159823477731,0,0,0.781226309063701,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.460325236507177,0,0.859265911718438,1.37016503954128,0.755393897389701,0,0.900642406448441,2.26571204492102,0,0,0.399024873401031,1.19513524027894,1.21553358534147,1.04806581313991,2.20612210140017,2.889207461421,2.88449080134452,1.92551525755089,2.52697211763797,3.29523089857312,2.07488975524684,1.68554713445788,2.24088033417042,2.35485422718014,1.90517476513229,2.54945517078682,2.70072908649187,2.88460130562315,2.20798380201596,1.71434626192708,1.77475806159337,1.90748951957857,2.32554266611726,1.31753132581463,2.45382362885862,0.73171189149109,1.8414879800649,2.98769050460896,1.12228454331548,1.77952527186261,2.26560309463796,4.50154147486658,2.01417893541756,1.73615949883027,0.249810577937946,4.44470056046276,8.80971321598023,0,0.441182838239031,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.893811366596314,0.307213066512487,0,0,0,0,0.56276261003168,0.30559649555362,0.589257170947335,0,0,0,0,2.02905142091174,175.526470904203,55.0776780303278,194.832852181252,499.678065017258,487.453253161901,44.2399923415018,0,0,0,0,0,0,0,0,0,0,84.4960709921044,0,1.7813056687779,0.173485326766136,0.608930956624282,1.15307748628029,0.904335843315735,4.23319345688537,1.13099932196708,0,0.433798070759735,0,0.161766849947409,0,0,0,0,1.25668024088073,0,0,0,0,0.299581278809645,0.457500602818626,0,0.347648640384553,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,2.10986744970001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0.232236671860439,0.128867461322093,0,0,0.570676878337677,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0.571242563048644,0,0,0,0.210407459670956,0,0,0,0,321.947553016644,2.00214126859313,3.73462090715086,8.31989815823959,9.94014594803664,11.576503668116,17.8238096246994,35.0989287689989,151.110031354333,72.7587744948416,73.3217853289508,85.2202770160873,87.370548472077,161.650481886152,199.131129009323,270.168371963486,0.184753190166605,0,0,0,0.234690248288502,0,0.476087281772027,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,1.42598951353889,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0.406638934253697,0,0,0.436725127492355,2.02296519577231,7.85207829390691,0,0,0,0,0,0,0,0.129159823477731,0,0,0.781226309063701,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.460325236507177,0,0.859265911718438,1.37016503954128,0.755393897389701,0,0.900642406448441,2.26571204492102,0,0,0.399024873401031,1.19513524027894,1.21553358534147,1.04806581313991,2.20612210140017,2.889207461421,2.88449080134452,1.92551525755089,2.52697211763797,3.29523089857312,2.07488975524684,1.68554713445788,2.24088033417042,2.35485422718014,1.90517476513229,2.54945517078682,2.70072908649187,2.88460130562315,2.20798380201596,1.71434626192708,1.77475806159337,1.90748951957857,2.32554266611726,1.31753132581463,2.45382362885862,0.73171189149109,1.8414879800649,2.98769050460896,1.12228454331548,1.77952527186261,2.26560309463796,4.50154147486658,2.01417893541756,1.73615949883027,0.249810577937946,4.44470056046276,8.80971321598023,0,0.441182838239031,0 | ||
|short_description=p2@Rapgef4 | |short_description=p2@Rapgef4 | ||
}} | }} |
Latest revision as of 22:39, 26 September 2015
Short description: | p2@Rapgef4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rapgef4_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 294bp_to_ENSMUST00000153887_5end |
EntrezGene: | Rapgef4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.69e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.62e-31 | 22 |
epithelial sac | 1.62e-31 | 22 |
digestive gland | 1.62e-31 | 22 |
epithelium of foregut-midgut junction | 1.62e-31 | 22 |
anatomical boundary | 1.62e-31 | 22 |
hepatobiliary system | 1.62e-31 | 22 |
foregut-midgut junction | 1.62e-31 | 22 |
hepatic diverticulum | 1.62e-31 | 22 |
liver primordium | 1.62e-31 | 22 |
septum transversum | 1.62e-31 | 22 |
liver bud | 1.62e-31 | 22 |
digestive tract diverticulum | 8.08e-30 | 23 |
sac | 8.08e-30 | 23 |
exocrine gland | 7.82e-27 | 25 |
exocrine system | 7.82e-27 | 25 |
trunk mesenchyme | 1.15e-16 | 45 |
abdomen element | 1.20e-14 | 49 |
abdominal segment element | 1.20e-14 | 49 |
abdominal segment of trunk | 1.20e-14 | 49 |
abdomen | 1.20e-14 | 49 |
epithelial tube | 5.83e-11 | 47 |
endocrine gland | 1.53e-10 | 60 |
mesenchyme | 3.03e-10 | 61 |
entire embryonic mesenchyme | 3.03e-10 | 61 |
gland | 3.69e-09 | 65 |
subdivision of trunk | 6.55e-09 | 66 |
gut epithelium | 2.00e-08 | 55 |
endocrine system | 2.84e-08 | 72 |
trunk region element | 6.69e-07 | 79 |