FFCP PHASE1:Mm9::chr6:85770930..85770956,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100504710 | |EntrezGene=100504710 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2211 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JIY8 | |UniProt=Q9JIY8 | ||
|association_with_transcript=0bp_to_ENSMUST00000174143_5end | |association_with_transcript=0bp_to_ENSMUST00000174143_5end | ||
|cluster_id=chr6:85770930..85770956,- | |||
|description=CAGE_peak_1_at_Gm11128_5end | |description=CAGE_peak_1_at_Gm11128_5end | ||
|id=chr6:85770930..85770956,- | |id=chr6:85770930..85770956,- | ||
|ontology_enrichment_celltype=CL:0000066!4.13e-13!25;CL:0000239!6.29e-12!6;CL:0000677!6.29e-12!6;CL:0000212!6.29e-12!6;CL:0000584!6.29e-12!6;CL:0000075!4.22e-10!7;CL:0000223!4.87e-10!20;CL:0002563!5.36e-10!9;CL:0002251!5.36e-10!9;CL:0000473!2.13e-07!3;CL:0000627!2.13e-07!3;CL:0000682!2.13e-07!3;CL:0000181!6.10e-07!5;CL:0000417!6.10e-07!5;CL:0000668!6.10e-07!5;CL:0000412!6.10e-07!5;CL:0000182!6.10e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.94e-17,25;CL:0000239,8.61e-17,6;CL:0000677,8.61e-17,6;CL:0000584,8.61e-17,6;CL:0000075,2.60e-14,7;CL:0000223,9.50e-13,20;CL:0002563,5.32e-11,9;CL:0002251,5.32e-11,9;CL:0000682,3.82e-10,3;CL:0000182,1.15e-09,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.93e-21!15;UBERON:0000160!3.11e-17!43;UBERON:0001242!5.91e-17!13;UBERON:0000060!5.91e-17!13;UBERON:0001262!5.91e-17!13;UBERON:0004786!5.91e-17!13;UBERON:0005409!3.61e-12!59;UBERON:0004923!8.87e-12!24;UBERON:0003350!5.36e-10!9;UBERON:0004808!5.36e-10!9;UBERON:0001277!5.36e-10!9;UBERON:0001007!3.90e-09!128;UBERON:0001555!3.90e-09!128;UBERON:0007026!3.90e-09!128;UBERON:0004119!7.14e-09!130;UBERON:0000925!7.14e-09!130;UBERON:0006595!7.14e-09!130;UBERON:0000485!5.73e-08!11;UBERON:0004921!1.25e-07!126;UBERON:0004185!1.25e-07!126;UBERON:0000331!8.48e-07!3;UBERON:0002116!8.48e-07!3;UBERON:0001204!8.48e-07!3;UBERON:0001168!8.48e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.36e-26,31;UBERON:0000344,2.61e-26,15;UBERON:0001242,8.89e-21,13;UBERON:0001262,8.89e-21,13;UBERON:0004786,8.89e-21,13;UBERON:0005409,3.12e-16,47;UBERON:0004923,1.58e-15,24;UBERON:0002108,1.30e-11,4;UBERON:0003350,5.32e-11,9;UBERON:0004808,5.32e-11,9;UBERON:0001277,5.32e-11,9;UBERON:0001007,7.16e-11,116;UBERON:0001555,7.16e-11,116;UBERON:0007026,7.16e-11,116;UBERON:0004119,1.34e-10,118;UBERON:0000925,1.34e-10,118;UBERON:0006595,1.34e-10,118;UBERON:0000331,2.89e-09,3;UBERON:0002116,2.89e-09,3;UBERON:0001204,2.89e-09,3;UBERON:0001168,2.89e-09,3;UBERON:0000485,6.86e-09,11;UBERON:0004921,8.24e-09,114;UBERON:0001962,1.87e-07,2;UBERON:0001961,1.87e-07,2;UBERON:0001744,1.87e-07,2 | |||
|phase1_expression=0,17.4487703819681,15.9249733786338,3.93203474698879,6.01074875935617,2.68606835059024,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,15.5192650109604,17.4351053611049,19.5238867799107,12.9228598847722,12.0663890304098,8.55105387553682,6.80481350351813,5.09980174507201,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,16.9992833426938,14.0322829825832,5.19821133958135,2.68816132258401,5.89866564553358,0,0,0,0,0,0,0,0,0,0,7.30776830201984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.0069036941854,13.4869788998408,0,0,0,0,0,0,12.8122846617018,1.97638745668813,0.502670417600539,0,0.38992817423824,6.29173586057955,3.02593269824572,8.96135729644652,0,0,0,0.407302655690628,0.969762435838129,0.49095073923223,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,17.4487703819681,15.9249733786338,3.93203474698879,6.01074875935617,2.68606835059024,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,15.5192650109604,17.4351053611049,19.5238867799107,12.9228598847722,12.0663890304098,8.55105387553682,6.80481350351813,5.09980174507201,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,16.9992833426938,14.0322829825832,5.19821133958135,2.68816132258401,5.89866564553358,0,0,0,0,0,0,0,0,0,0,7.30776830201984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.0069036941854,13.4869788998408,0,0,0,0,0,0,12.8122846617018,1.97638745668813,0.502670417600539,0,0.38992817423824,6.29173586057955,3.02593269824572,8.96135729644652,0,0,0,0.407302655690628,0.969762435838129,0.49095073923223,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p1@Gm11128 | |short_description=p1@Gm11128 | ||
}} | }} |
Latest revision as of 20:00, 1 October 2015
Short description: | p1@Gm11128 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm11128_5end |
Coexpression cluster: | MCL_coexpression_mm9:2211 |
Association with transcript: | 0bp_to_ENSMUST00000174143_5end |
EntrezGene: | Gm11128 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.94e-17 | 25 |
brush border epithelial cell | 8.61e-17 | 6 |
gut absorptive cell | 8.61e-17 | 6 |
enterocyte | 8.61e-17 | 6 |
columnar/cuboidal epithelial cell | 2.60e-14 | 7 |
endodermal cell | 9.50e-13 | 20 |
intestinal epithelial cell | 5.32e-11 | 9 |
epithelial cell of alimentary canal | 5.32e-11 | 9 |
M cell of gut | 3.82e-10 | 3 |
hepatocyte | 1.15e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.36e-26 | 31 |
mucosa | 2.61e-26 | 15 |
intestinal mucosa | 8.89e-21 | 13 |
wall of intestine | 8.89e-21 | 13 |
gastrointestinal system mucosa | 8.89e-21 | 13 |
gastrointestinal system | 3.12e-16 | 47 |
organ component layer | 1.58e-15 | 24 |
small intestine | 1.30e-11 | 4 |
epithelium of mucosa | 5.32e-11 | 9 |
gastrointestinal system epithelium | 5.32e-11 | 9 |
intestinal epithelium | 5.32e-11 | 9 |
digestive system | 7.16e-11 | 116 |
digestive tract | 7.16e-11 | 116 |
primitive gut | 7.16e-11 | 116 |
endoderm-derived structure | 1.34e-10 | 118 |
endoderm | 1.34e-10 | 118 |
presumptive endoderm | 1.34e-10 | 118 |
ileal mucosa | 2.89e-09 | 3 |
ileum | 2.89e-09 | 3 |
mucosa of small intestine | 2.89e-09 | 3 |
wall of small intestine | 2.89e-09 | 3 |
simple columnar epithelium | 6.86e-09 | 11 |
subdivision of digestive tract | 8.24e-09 | 114 |
gut-associated lymphoid tissue | 1.87e-07 | 2 |
mucosa-associated lymphoid tissue | 1.87e-07 | 2 |
lymphoid tissue | 1.87e-07 | 2 |