FFCP PHASE1:Mm9::chr4:98789176..98789188,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:98789176..98789188,- | |||
|description=CAGE_peak_at_chr4:98789176..98789188,- | |description=CAGE_peak_at_chr4:98789176..98789188,- | ||
|id=chr4:98789176..98789188,- | |id=chr4:98789176..98789188,- | ||
|ontology_enrichment_celltype=CL:0000107!2.44e-17!9;CL:0000055!4.04e-08!50 | |ontology_enrichment_celltype=CL:0000107!2.44e-17!9;CL:0000055!4.04e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.72e-68,9;CL:0000540,1.13e-18,33;CL:0000047,1.13e-18,33;CL:0000031,1.13e-18,33;CL:0000404,1.13e-18,33;CL:0002319,4.15e-18,43;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0000393,8.87e-16,39;CL:0000211,8.87e-16,39;CL:0002321,4.95e-11,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!7.85e-21!11;UBERON:0002410!2.44e-17!9;UBERON:0004121!4.48e-08!102;UBERON:0000924!4.48e-08!102;UBERON:0006601!4.48e-08!102;UBERON:0000011!5.55e-07!3;UBERON:0000013!6.59e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,6.78e-71,11;UBERON:0002410,1.72e-68,9;UBERON:0000011,4.54e-30,3;UBERON:0000013,1.12e-29,3;UBERON:0010313,7.72e-14,3;UBERON:0002342,7.72e-14,3;UBERON:0002005,7.72e-14,3;UBERON:0005428,7.72e-14,3;UBERON:0005062,7.72e-14,3;UBERON:0001016,2.82e-10,75;UBERON:0001017,2.64e-08,73;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,3.47629176491213,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,1.95219372148319,4.09304455692318,2.62865677747807,5.34716817797746,5.37845408498782,1.21443210502468,2.63030272120181,5.53402889125133,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0.514518872071894,0.85960031981627,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,3.47629176491213,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,1.95219372148319,4.09304455692318,2.62865677747807,5.34716817797746,5.37845408498782,1.21443210502468,2.63030272120181,5.53402889125133,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:98789176..98789188,- | |short_description=p@chr4:98789176..98789188,- | ||
}} | }} |
Latest revision as of 20:53, 5 August 2015
Short description: | p@chr4:98789176..98789188, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:98789176..98789188, - |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.72e-68 | 9 |
neuron | 1.13e-18 | 33 |
neuronal stem cell | 1.13e-18 | 33 |
neuroblast | 1.13e-18 | 33 |
electrically signaling cell | 1.13e-18 | 33 |
neural cell | 4.15e-18 | 43 |
ectodermal cell | 1.08e-17 | 44 |
neurectodermal cell | 1.08e-17 | 44 |
electrically responsive cell | 8.87e-16 | 39 |
electrically active cell | 8.87e-16 | 39 |
embryonic cell | 4.95e-11 | 70 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 6.78e-71 | 11 |
autonomic nervous system | 1.72e-68 | 9 |
parasympathetic nervous system | 4.54e-30 | 3 |
sympathetic nervous system | 1.12e-29 | 3 |
neural crest-derived structure | 7.72e-14 | 3 |
neural crest | 7.72e-14 | 3 |
enteric nervous system | 7.72e-14 | 3 |
vagal neural crest | 7.72e-14 | 3 |
neural fold | 7.72e-14 | 3 |
nervous system | 2.82e-10 | 75 |
central nervous system | 2.64e-08 | 73 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |