FFCP PHASE1:Mm9::chr5:33491600..33491610,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:33491600..33491610,+ | |||
|description=CAGE_peak_at_chr5:33491600..33491610,+ | |description=CAGE_peak_at_chr5:33491600..33491610,+ | ||
|id=chr5:33491600..33491610,+ | |id=chr5:33491600..33491610,+ | ||
|ontology_enrichment_celltype=CL:0000239!7.39e-15!6;CL:0000677!7.39e-15!6;CL:0000212!7.39e-15!6;CL:0000584!7.39e-15!6;CL:0002563!6.47e-13!9;CL:0002251!6.47e-13!9;CL:0000075!1.25e-12!7;CL:0000066!3.49e-08!25;CL:0000473!3.55e-08!3;CL:0000627!3.55e-08!3;CL:0000682!3.55e-08!3;CL:0002076!2.57e-07!15 | |ontology_enrichment_celltype=CL:0000239!7.39e-15!6;CL:0000677!7.39e-15!6;CL:0000212!7.39e-15!6;CL:0000584!7.39e-15!6;CL:0002563!6.47e-13!9;CL:0002251!6.47e-13!9;CL:0000075!1.25e-12!7;CL:0000066!3.49e-08!25;CL:0000473!3.55e-08!3;CL:0000627!3.55e-08!3;CL:0000682!3.55e-08!3;CL:0002076!2.57e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.83e-10,6;CL:0000677,3.83e-10,6;CL:0000584,3.83e-10,6;CL:0000682,3.51e-09,3;CL:0000075,9.05e-09,7;CL:0002563,6.25e-07,9;CL:0002251,6.25e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.94e-27!15;UBERON:0000160!9.21e-26!43;UBERON:0001242!3.92e-22!13;UBERON:0000060!3.92e-22!13;UBERON:0001262!3.92e-22!13;UBERON:0004786!3.92e-22!13;UBERON:0004923!9.46e-21!24;UBERON:0005409!6.62e-19!59;UBERON:0003350!6.47e-13!9;UBERON:0004808!6.47e-13!9;UBERON:0001277!6.47e-13!9;UBERON:0000485!2.27e-10!11;UBERON:0004119!7.69e-09!130;UBERON:0000925!7.69e-09!130;UBERON:0006595!7.69e-09!130;UBERON:0000331!8.57e-09!3;UBERON:0002116!8.57e-09!3;UBERON:0001204!8.57e-09!3;UBERON:0001168!8.57e-09!3;UBERON:0001007!3.17e-08!128;UBERON:0001555!3.17e-08!128;UBERON:0007026!3.17e-08!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.38e-26,15;UBERON:0000160,1.78e-19,31;UBERON:0001242,1.30e-17,13;UBERON:0001262,1.30e-17,13;UBERON:0004786,1.30e-17,13;UBERON:0004923,2.29e-16,24;UBERON:0002108,2.96e-15,4;UBERON:0001962,1.69e-13,2;UBERON:0001961,1.69e-13,2;UBERON:0001744,1.69e-13,2;UBERON:0005409,1.74e-12,47;UBERON:0000331,8.19e-10,3;UBERON:0002116,8.19e-10,3;UBERON:0001204,8.19e-10,3;UBERON:0001168,8.19e-10,3;UBERON:0002465,2.63e-09,3;UBERON:0003199,1.14e-07,1;UBERON:0003350,6.25e-07,9;UBERON:0004808,6.25e-07,9;UBERON:0001277,6.25e-07,9 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,2.41971369045464,2.00358291978539,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.60586496747019,1.14846392823004,0.430761996159075,1.50829862880122,6.84084310042946,2.26827116783938,0.886922042621219,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.528901133327089,0,0,0,0.605050573870028,0.22237804384487,0.760902504450237,3.79623249235609,0.329397909448022,0,0.198956472041151,0.58489226135736,0,0.432276099749388,1.1948476395262,0,0,0,0,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,0.909998478779072,2.41971369045464,2.00358291978539,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.60586496747019,1.14846392823004,0.430761996159075,1.50829862880122,6.84084310042946,2.26827116783938,0.886922042621219,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.528901133327089,0,0,0,0.605050573870028,0.22237804384487,0.760902504450237,3.79623249235609,0.329397909448022,0,0.198956472041151,0.58489226135736,0,0.432276099749388,1.1948476395262,0,0,0,0,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:33491600..33491610,+ | |short_description=p@chr5:33491600..33491610,+ | ||
}} | }} |
Latest revision as of 07:53, 4 August 2015
Short description: | p@chr5:33491600..33491610, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:33491600..33491610, + |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.83e-10 | 6 |
gut absorptive cell | 3.83e-10 | 6 |
enterocyte | 3.83e-10 | 6 |
M cell of gut | 3.51e-09 | 3 |
columnar/cuboidal epithelial cell | 9.05e-09 | 7 |
intestinal epithelial cell | 6.25e-07 | 9 |
epithelial cell of alimentary canal | 6.25e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.38e-26 | 15 |
intestine | 1.78e-19 | 31 |
intestinal mucosa | 1.30e-17 | 13 |
wall of intestine | 1.30e-17 | 13 |
gastrointestinal system mucosa | 1.30e-17 | 13 |
organ component layer | 2.29e-16 | 24 |
small intestine | 2.96e-15 | 4 |
gut-associated lymphoid tissue | 1.69e-13 | 2 |
mucosa-associated lymphoid tissue | 1.69e-13 | 2 |
lymphoid tissue | 1.69e-13 | 2 |
gastrointestinal system | 1.74e-12 | 47 |
ileal mucosa | 8.19e-10 | 3 |
ileum | 8.19e-10 | 3 |
mucosa of small intestine | 8.19e-10 | 3 |
wall of small intestine | 8.19e-10 | 3 |
lymphoid system | 2.63e-09 | 3 |
egg chamber | 1.14e-07 | 1 |
epithelium of mucosa | 6.25e-07 | 9 |
gastrointestinal system epithelium | 6.25e-07 | 9 |
intestinal epithelium | 6.25e-07 | 9 |