CL:0002518: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002518
|name=kidney epithelial cell
|namespace=cell
|def="An epithelial cell of the kidney." [GOC:tfm, KUPO:SJ]
|xref=KUPO:0001019
|is_a=CL:0000066;;CL:1000...") |
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|created_by=tmeehan | |created_by=tmeehan | ||
| | |def="An epithelial cell of the kidney." [GOC:tfm, KUPO:SJ] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
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|has_quality= | |has_quality= | ||
|id=CL:0002518 | |||
|is_a=CL:0000066 ;;CL:1000497 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=kidney epithelial cell | |||
|namespace=FANTOM | |||
|obo_creation_date=2011-02-08T10:46:34Z | |||
|part_of=UBERON:0002113 | |part_of=UBERON:0002113 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
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|synonym= | |||
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|xref=KUPO:0001019 | |||
}} | }} |
Latest revision as of 16:43, 12 September 2014
Name: | kidney epithelial cell | |
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Namespace: | FANTOM | |
Definition: | "An epithelial cell of the kidney." [GOC:tfm, KUPO:SJ] | |
Xrefs: |
| |
Created by: | tmeehan | |
Creation date: | 2011-02-08T10:46:34Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000066(epithelial cell),CL:1000497(kidney cell) |
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part_of: | UBERON:0002113(kidney) |
Children
is a: | CL:0002584 (renal cortical epithelial cell),CL:1000449 (epithelial cell of nephron) |
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derives from: | FF:0000115 (mouse kidney epithelial cell sample),FF:0100383 (renal cell carcinoma cell line sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10466-106H7
- 10471-106I3 (renal cell carcinoma cell line:TUHR10TKB)
- 10517-107E4
- 10518-107E5
- 10519-107E6
- 10540-107G9
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
... further results Mouse (Mus musculus)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10466-106H7
- 10471-106I3 (renal cell carcinoma cell line:TUHR10TKB)
- 10517-107E4
- 10518-107E5
- 10519-107E6
- 10540-107G9
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002518 (kidney epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data