Personal tools

UBERON:0001179: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|xref=BTO:0001782;;EHDAA2:0001446;;EMAPA:18452;;EMAPA:18454;;EMAPA:18461;;FMA:14704;;GAID:24;;MA:0000054;;MESH:A.01.047.025.600.678;;ncithesaurus:Peritoneal_Cavity;;SCTID:181616008;;VHOG:0000852
|xref=BTO:0001782;;EHDAA2:0001446;;EMAPA:18452;;EMAPA:18454;;EMAPA:18461;;FMA:14704;;GAID:24;;MA:0000054;;MESH:A.01.047.025.600.678;;ncithesaurus:Peritoneal_Cavity;;SCTID:181616008;;VHOG:0000852
|is_a=UBERON:0002323
|is_a=UBERON:0002323
|synonym="cavitas peritonealis" RELATED [BTO:0001782]
|synonym="cavitas peritonealis" RELATED [BTO:0001782];;"cavitas peritonealis; saccus serosus peritonei" RELATED LATIN [Wikipedia:Peritoneal_cavity]
|comment=This class was created automatically from a combination of ontologies
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_14704-MA_0000054
|alt_id=UBERON:FMA_14704-MA_0000054
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=uberon_slim
|subset=uberon_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0003887
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=

Revision as of 16:58, 26 June 2012

Name:peritoneal cavity
Definition:"Cavity of serous sac surrounded by the peritoneum.[FMA]" [FMA:FMA, Wikipedia:Peritoneal_cavity]
Xrefs:
links:

BTO:0001782
EHDAA2:0001446
EMAPA:18452
EMAPA:18454
EMAPA:18461
FMA:14704
GAID:24
MA:0000054
MESH:A.01.047.025.600.678
ncithesaurus:Peritoneal_Cavity
SCTID:181616008

VHOG:0000852
Synonyms: "cavitas peritonealis" RELATED [BTO:0001782]
"cavitas peritonealis; saccus serosus peritonei" RELATED LATIN [Wikipedia:Peritoneal_cavity]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_14704-MA_0000054
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002323(body cavity)



Children

part of:UBERON:0009664 (gut mesentery)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001179 (peritoneal cavity), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.98e-131FFCP PHASE2:Hg19::chr9:133973310..133973321,+#_a48e377de8d25d5e9b1d52c53f40fcdcp18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr21:28820941..28820952,-#_a48e377de8d25d5e9b1d52c53f40fcdcp2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr8:22424709..22424716,-#_a48e377de8d25d5e9b1d52c53f40fcdcp2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr17:78171885..78171900,+#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr17:78171885..78171900, +
8.98e-131FFCP PHASE1:Hg19::chr11:56859584..56859589,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859584..56859589, -
8.98e-131FFCP PHASE1:Hg19::chr1:157811772..157811796,-#_a48e377de8d25d5e9b1d52c53f40fcdcp7@CD5L
8.98e-131FFCP PHASE2:Hg19::chr11:56859584..56859589,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859584..56859589, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269462..127269484,-#_a48e377de8d25d5e9b1d52c53f40fcdcp2@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr16:84218794..84218800,+#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr16:84218794..84218800, +
8.98e-131FFCP PHASE1:Hg19::chr21:28820892..28820899,-#_a48e377de8d25d5e9b1d52c53f40fcdcp4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr6:152639579..152639586,-#_a48e377de8d25d5e9b1d52c53f40fcdcp60@SYNE1
8.98e-131FFCP PHASE1:Hg19::chr11:925449..925458,+#_a48e377de8d25d5e9b1d52c53f40fcdcp17@AP2A2
8.98e-131FFCP PHASE1:Hg19::chr19:32401253..32401271,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr19:32401253..32401271, -
8.98e-131FFCP PHASE2:Hg19::chr8:47834174..47834213,+#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000524012
8.98e-131FFCP PHASE2:Hg19::chr7:22259740..22259751,-#_a48e377de8d25d5e9b1d52c53f40fcdcp19@RAPGEF5
8.98e-131FFCP PHASE2:Hg19::chr21:28820954..28820963,-#_a48e377de8d25d5e9b1d52c53f40fcdcp3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr8:22424743..22424759,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000517384
8.98e-131FFCP PHASE1:Hg19::chrX:69645652..69645664,+#_a48e377de8d25d5e9b1d52c53f40fcdcp7@GDPD2
8.98e-131FFCP PHASE1:Hg19::chr11:56859603..56859606,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859603..56859606, -
8.98e-131FFCP PHASE2:Hg19::chr11:56859603..56859606,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859603..56859606, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269488..127269495,-#_a48e377de8d25d5e9b1d52c53f40fcdcp5@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr9:124516729..124516752,+#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr9:124516729..124516752, +
8.98e-131FFCP PHASE1:Hg19::chr21:28820911..28820933,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr17:78171885..78171900,+#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr17:78171885..78171900, +
8.98e-131FFCP PHASE2:Hg19::chr6:119812455..119812476,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@uc003pyn.1
8.98e-131FFCP PHASE1:Hg19::chr9:79894790..79894797,+#_a48e377de8d25d5e9b1d52c53f40fcdcp10@VPS13A
8.98e-131FFCP PHASE1:Hg19::chr10:98014908..98014919,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr4:76901930..76901942,+#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr10:98014908..98014919,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr8:22436248..22436259,+#_a48e377de8d25d5e9b1d52c53f40fcdcp11@PDLIM2
8.98e-131FFCP PHASE1:Hg19::chr11:56859608..56859619,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859608..56859619, -
8.98e-131FFCP PHASE1:Hg19::chr1:159172187..159172197,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@uc001ftm.1
8.98e-131FFCP PHASE2:Hg19::chr11:56859608..56859619,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859608..56859619, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269434..127269438,-#_a48e377de8d25d5e9b1d52c53f40fcdcp8@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr1:28520450..28520453,-#_a48e377de8d25d5e9b1d52c53f40fcdcp21@PTAFR
8.98e-131FFCP PHASE1:Hg19::chr15:95561320..95561328,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr15:95561320..95561328, -
8.98e-131FFCP PHASE2:Hg19::chr8:22424709..22424716,-#_a48e377de8d25d5e9b1d52c53f40fcdcp2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr1:157811772..157811796,-#_a48e377de8d25d5e9b1d52c53f40fcdcp7@CD5L
8.98e-131FFCP PHASE1:Hg19::chr21:28820941..28820952,-#_a48e377de8d25d5e9b1d52c53f40fcdcp2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr21:28820892..28820899,-#_a48e377de8d25d5e9b1d52c53f40fcdcp4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr9:127260615..127260651,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr9:127260615..127260651, -
8.98e-131FFCP PHASE2:Hg19::chr16:84218794..84218800,+#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr16:84218794..84218800, +
8.98e-131FFCP PHASE1:Hg19::chr10:98014943..98014960,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr10:98014943..98014960, -
8.98e-131FFCP PHASE1:Hg19::chr6:152639579..152639586,-#_a48e377de8d25d5e9b1d52c53f40fcdcp60@SYNE1
8.98e-131FFCP PHASE2:Hg19::chr10:98014943..98014960,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr10:98014943..98014960, -
8.98e-131FFCP PHASE1:Hg19::chr14:75904485..75904519,+#_a48e377de8d25d5e9b1d52c53f40fcdcp12@JDP2
8.98e-131FFCP PHASE1:Hg19::chr9:133973310..133973321,+#_a48e377de8d25d5e9b1d52c53f40fcdcp18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr15:95561320..95561328,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr15:95561320..95561328, -
8.98e-131FFCP PHASE1:Hg19::chr11:56859638..56859643,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859638..56859643, -
8.98e-131FFCP PHASE1:Hg19::chr8:47834174..47834213,+#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000524012
8.98e-131FFCP PHASE2:Hg19::chr11:56859638..56859643,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859638..56859643, -
8.98e-131FFCP PHASE2:Hg19::chr19:32401253..32401271,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr19:32401253..32401271, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269462..127269484,-#_a48e377de8d25d5e9b1d52c53f40fcdcp2@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr8:22424743..22424759,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chrX:69645652..69645664,+#_a48e377de8d25d5e9b1d52c53f40fcdcp7@GDPD2
8.98e-131FFCP PHASE1:Hg19::chr11:1891326..1891337,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:1891326..1891337, -
8.98e-131FFCP PHASE1:Hg19::chr21:28820954..28820963,-#_a48e377de8d25d5e9b1d52c53f40fcdcp3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr11:1891326..1891337,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:1891326..1891337, -
8.98e-131FFCP PHASE2:Hg19::chr21:28820911..28820933,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr11:925449..925458,+#_a48e377de8d25d5e9b1d52c53f40fcdcp17@AP2A2
8.98e-131FFCP PHASE2:Hg19::chr9:127269434..127269438,-#_a48e377de8d25d5e9b1d52c53f40fcdcp8@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr6:119812455..119812476,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@uc003pyn.1
8.98e-131FFCP PHASE2:Hg19::chr14:75904485..75904519,+#_a48e377de8d25d5e9b1d52c53f40fcdcp12@JDP2
8.98e-131FFCP PHASE2:Hg19::chr9:79894790..79894797,+#_a48e377de8d25d5e9b1d52c53f40fcdcp10@VPS13A
8.98e-131FFCP PHASE1:Hg19::chr7:22259740..22259751,-#_a48e377de8d25d5e9b1d52c53f40fcdcp19@RAPGEF5
8.98e-131FFCP PHASE1:Hg19::chr11:56859693..56859701,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859693..56859701, -
8.98e-131FFCP PHASE2:Hg19::chr11:56859693..56859701,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859693..56859701, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269488..127269495,-#_a48e377de8d25d5e9b1d52c53f40fcdcp5@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr4:76901930..76901942,+#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr9:127260615..127260651,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr9:127260615..127260651, -
8.98e-131FFCP PHASE2:Hg19::chr8:22436248..22436259,+#_a48e377de8d25d5e9b1d52c53f40fcdcp11@PDLIM2
8.98e-131FFCP PHASE1:Hg19::chr9:124516729..124516752,+#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr9:124516729..124516752, +
8.98e-131FFCP PHASE2:Hg19::chr1:159172187..159172197,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@uc001ftm.1
8.98e-131FFCP PHASE1:Hg19::chr1:28520450..28520453,-#_a48e377de8d25d5e9b1d52c53f40fcdcp21@PTAFR
6.24e-88FFCP PHASE1:Hg19::chr22:36718586..36718593,-#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr22:36718586..36718593, -
6.24e-88FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr21:40459334..40459341, +
6.24e-88FFCP PHASE1:Hg19::chr11:56859722..56859732,-#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr11:56859722..56859732, -
6.24e-88FFCP PHASE2:Hg19::chr11:56859722..56859732,-#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr11:56859722..56859732, -
6.24e-88FFCP PHASE1:Hg19::chr4:146461014..146461025,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr4:146461014..146461025, +
6.24e-88FFCP PHASE1:Hg19::chr3:130267501..130267516,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr3:130267501..130267516, +
6.24e-88FFCP PHASE1:Hg19::chr9:127267367..127267383,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr9:127267367..127267383, +
6.24e-88FFCP PHASE1:Hg19::chr1:21011608..21011618,-#_9b562dcb202d59fbff6d4dfccfdc0ceep15@KIF17
6.24e-88FFCP PHASE2:Hg19::chr22:36718586..36718593,-#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr22:36718586..36718593, -
6.24e-88FFCP PHASE1:Hg19::chr19:32401274..32401289,-#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr19:32401274..32401289, -
6.24e-88FFCP PHASE2:Hg19::chr9:127267367..127267383,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr9:127267367..127267383, +
6.24e-88FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr21:40459334..40459341, +
6.24e-88FFCP PHASE2:Hg19::chr4:146461014..146461025,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr4:146461014..146461025, +
6.24e-88FFCP PHASE2:Hg19::chr3:130267501..130267516,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr3:130267501..130267516, +
6.24e-88FFCP PHASE2:Hg19::chr1:21011608..21011618,-#_9b562dcb202d59fbff6d4dfccfdc0ceep15@KIF17
6.24e-88FFCP PHASE2:Hg19::chr19:32401274..32401289,-#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr19:32401274..32401289, -
9.74e-88FFCP PHASE1:Hg19::chr14:24168655..24168686,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr14:24168655..24168686, +
9.74e-88FFCP PHASE1:Hg19::chr2:1508349..1508357,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr2:1508349..1508357, +
9.74e-88FFCP PHASE2:Hg19::chr12:72481040..72481051,+#_7bb068aa10c9e464b4df16c69a0694c4p19@TRHDE
9.74e-88FFCP PHASE2:Hg19::chr2:128321491..128321509,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr2:128321491..128321509, +
9.74e-88FFCP PHASE1:Hg19::chr16:70680361..70680370,+#_7bb068aa10c9e464b4df16c69a0694c4p6@IL34
9.74e-88FFCP PHASE2:Hg19::chr14:24168655..24168686,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr14:24168655..24168686, +
9.74e-88FFCP PHASE2:Hg19::chr7:151070957..151070988,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr7:151070957..151070988, +
9.74e-88FFCP PHASE2:Hg19::chr2:1508349..1508357,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr2:1508349..1508357, +
9.74e-88FFCP PHASE1:Hg19::chr7:151070957..151070988,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr7:151070957..151070988, +
9.74e-88FFCP PHASE1:Hg19::chr2:128321491..128321509,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr2:128321491..128321509, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0001179&oldid=1835493"