Personal tools

UBERON:0000091: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 15: Line 15:
|subset=early_development
|subset=early_development
|derives_from=
|derives_from=
|develops_from=
|develops_from=UBERON:0000087
|has_quality=
|has_quality=
|located_in=
|located_in=

Revision as of 13:25, 27 June 2012

Name:bilaminar disc
Definition:"the epiblast and the hypoblast, evolved from the embryoblast" [Wikipedia:Bilaminar_disc]
Xrefs:
links:

[ 200px-Gray21.png 200px-Gray21.png]

ncithesaurus:Bilaminar_Embryonic_Disc
Synonyms: "bilaminary embryonic disc" EXACT []
Subset: early_development

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002050(embryonic structure)
develops_from:UBERON:0000087(inner cell mass)



Children

part of:UBERON:0008780 (inner cell mass derived epiblast)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000091 (bilaminar disc), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
5.79e-79FFCP PHASE1:Hg19::chr7:135931480..135931486,+#_af89663288a1e850fc8713731930c41cp@chr7:135931480..135931486, +
5.79e-79FFCP PHASE1:Hg19::chr10:120921270..120921282,-#_af89663288a1e850fc8713731930c41cp@chr10:120921270..120921282, -
5.79e-79FFCP PHASE2:Hg19::chr10:120921270..120921282,-#_af89663288a1e850fc8713731930c41cp@chr10:120921270..120921282, -
5.79e-79FFCP PHASE2:Hg19::chr7:135931480..135931486,+#_af89663288a1e850fc8713731930c41cp@chr7:135931480..135931486, +
2.16e-63FFCP PHASE2:Hg19::chr1:205744117..205744127,-#_265ff9e7c760c74546e38892bc85f192p8@RAB7L1
2.16e-63FFCP PHASE1:Hg19::chr1:205744117..205744127,-#_265ff9e7c760c74546e38892bc85f192p8@RAB7L1
1.1e-59FFCP PHASE1:Hg19::chr2:228216535..228216554,+#_f368277acc3ff844cab9ba1b2847d97ep14@MFF
1.1e-59FFCP PHASE2:Hg19::chr6:484706..484722,+#_f368277acc3ff844cab9ba1b2847d97ep@chr6:484706..484722, +
1.1e-59FFCP PHASE2:Hg19::chr4:167982726..167982736,-#_f368277acc3ff844cab9ba1b2847d97ep@chr4:167982726..167982736, -
1.1e-59FFCP PHASE2:Hg19::chr8:59790413..59790418,-#_f368277acc3ff844cab9ba1b2847d97ep@chr8:59790413..59790418, -
1.1e-59FFCP PHASE2:Hg19::chr10:61574767..61574776,-#_f368277acc3ff844cab9ba1b2847d97ep@chr10:61574767..61574776, -
1.1e-59FFCP PHASE1:Hg19::chr19:53511711..53511720,-#_f368277acc3ff844cab9ba1b2847d97ep@chr19:53511711..53511720, -
1.1e-59FFCP PHASE1:Hg19::chr14:76017386..76017395,-#_f368277acc3ff844cab9ba1b2847d97ep@chr14:76017386..76017395, -
1.1e-59FFCP PHASE1:Hg19::chr10:61574767..61574776,-#_f368277acc3ff844cab9ba1b2847d97ep@chr10:61574767..61574776, -
1.1e-59FFCP PHASE1:Hg19::chr6:138023078..138023089,-#_f368277acc3ff844cab9ba1b2847d97ep@chr6:138023078..138023089, -
1.1e-59FFCP PHASE1:Hg19::chr21:18179708..18179733,-#_f368277acc3ff844cab9ba1b2847d97ep@chr21:18179708..18179733, -
1.1e-59FFCP PHASE1:Hg19::chr8:38216859..38216889,-#_f368277acc3ff844cab9ba1b2847d97ep@chr8:38216859..38216889, -
1.1e-59FFCP PHASE2:Hg19::chr15:43323789..43323811,-#_f368277acc3ff844cab9ba1b2847d97ep@chr15:43323789..43323811, -
1.1e-59FFCP PHASE2:Hg19::chr12:24889813..24889821,-#_f368277acc3ff844cab9ba1b2847d97ep@chr12:24889813..24889821, -
1.1e-59FFCP PHASE1:Hg19::chr10:120921294..120921306,-#_f368277acc3ff844cab9ba1b2847d97ep@chr10:120921294..120921306, -
1.1e-59FFCP PHASE2:Hg19::chr7:45954712..45954720,-#_f368277acc3ff844cab9ba1b2847d97ep41@IGFBP3
1.1e-59FFCP PHASE2:Hg19::chr12:77198556..77198565,+#_f368277acc3ff844cab9ba1b2847d97ep@chr12:77198556..77198565, +
1.1e-59FFCP PHASE2:Hg19::chrX:146004822..146004839,-#_f368277acc3ff844cab9ba1b2847d97ep@chrX:146004822..146004839, -
1.1e-59FFCP PHASE1:Hg19::chr4:167957459..167957470,-#_f368277acc3ff844cab9ba1b2847d97ep@chr4:167957459..167957470, -
1.1e-59FFCP PHASE2:Hg19::chr6:135486309..135486312,+#_f368277acc3ff844cab9ba1b2847d97ep@chr6:135486309..135486312, +
1.1e-59FFCP PHASE2:Hg19::chr2:148296759..148296767,+#_f368277acc3ff844cab9ba1b2847d97ep@chr2:148296759..148296767, +
1.1e-59FFCP PHASE2:Hg19::chr10:120921294..120921306,-#_f368277acc3ff844cab9ba1b2847d97ep@chr10:120921294..120921306, -
1.1e-59FFCP PHASE1:Hg19::chr9:94933452..94933457,+#_f368277acc3ff844cab9ba1b2847d97ep@chr9:94933452..94933457, +
1.1e-59FFCP PHASE2:Hg19::chr6:88854777..88854802,-#_f368277acc3ff844cab9ba1b2847d97ep16@CNR1
1.1e-59FFCP PHASE2:Hg19::chr3:45926373..45926388,-#_f368277acc3ff844cab9ba1b2847d97ep@chr3:45926373..45926388, -
1.1e-59FFCP PHASE2:Hg19::chr19:18603318..18603327,-#_f368277acc3ff844cab9ba1b2847d97ep@chr19:18603318..18603327, -
1.1e-59FFCP PHASE1:Hg19::chr3:153038353..153038371,+#_f368277acc3ff844cab9ba1b2847d97ep@chr3:153038353..153038371, +
1.1e-59FFCP PHASE1:Hg19::chr4:167791926..167791930,-#_f368277acc3ff844cab9ba1b2847d97ep@chr4:167791926..167791930, -
1.1e-59FFCP PHASE1:Hg19::chr2:74682916..74682923,+#_f368277acc3ff844cab9ba1b2847d97ep@chr2:74682916..74682923, +
1.1e-59FFCP PHASE1:Hg19::chr2:15651894..15651904,-#_f368277acc3ff844cab9ba1b2847d97ep4@NBAS
1.1e-59FFCP PHASE2:Hg19::chr1:168204286..168204299,+#_f368277acc3ff844cab9ba1b2847d97ep@chr1:168204286..168204299, +
1.1e-59FFCP PHASE2:Hg19::chr19:53511768..53511784,-#_f368277acc3ff844cab9ba1b2847d97ep@chr19:53511768..53511784, -
1.1e-59FFCP PHASE2:Hg19::chr14:76017349..76017357,-#_f368277acc3ff844cab9ba1b2847d97ep@chr14:76017349..76017357, -
1.1e-59FFCP PHASE2:Hg19::chr7:135705408..135705462,+#_f368277acc3ff844cab9ba1b2847d97ep@chr7:135705408..135705462, +
1.1e-59FFCP PHASE2:Hg19::chr21:18180040..18180058,-#_f368277acc3ff844cab9ba1b2847d97ep@chr21:18180040..18180058, -
1.1e-59FFCP PHASE2:Hg19::chr3:111311854..111311862,-#_f368277acc3ff844cab9ba1b2847d97ep@chr3:111311854..111311862, -
1.1e-59FFCP PHASE2:Hg19::chr10:15035430..15035449,-#_f368277acc3ff844cab9ba1b2847d97ep@chr10:15035430..15035449, -
1.1e-59FFCP PHASE1:Hg19::chr19:3149800..3149805,+#_f368277acc3ff844cab9ba1b2847d97ep@chr19:3149800..3149805, +
1.1e-59FFCP PHASE2:Hg19::chr3:195306394..195306429,-#_f368277acc3ff844cab9ba1b2847d97ep5@APOD
1.1e-59FFCP PHASE1:Hg19::chr10:15035430..15035449,-#_f368277acc3ff844cab9ba1b2847d97ep@chr10:15035430..15035449, -
1.1e-59FFCP PHASE2:Hg19::chrX:10129363..10129369,+#_f368277acc3ff844cab9ba1b2847d97ep@chrX:10129363..10129369, +
1.1e-59FFCP PHASE1:Hg19::chr20:38442120..38442126,+#_f368277acc3ff844cab9ba1b2847d97ep@chr20:38442120..38442126, +
1.1e-59FFCP PHASE2:Hg19::chr1:234631379..234631392,-#_f368277acc3ff844cab9ba1b2847d97ep@chr1:234631379..234631392, -
1.1e-59FFCP PHASE1:Hg19::chr2:148278743..148278751,+#_f368277acc3ff844cab9ba1b2847d97ep@chr2:148278743..148278751, +
1.1e-59FFCP PHASE1:Hg19::chr14:76957782..76957792,+#_f368277acc3ff844cab9ba1b2847d97ep@chr14:76957782..76957792, +
1.1e-59FFCP PHASE2:Hg19::chr19:49488858..49488869,-#_f368277acc3ff844cab9ba1b2847d97ep@chr19:49488858..49488869, -
1.1e-59FFCP PHASE1:Hg19::chr9:74995205..74995211,-#_f368277acc3ff844cab9ba1b2847d97ep@chr9:74995205..74995211, -
1.1e-59FFCP PHASE1:Hg19::chr3:45926401..45926410,-#_f368277acc3ff844cab9ba1b2847d97ep@chr3:45926401..45926410, -
1.1e-59FFCP PHASE1:Hg19::chr19:10983266..10983276,-#_f368277acc3ff844cab9ba1b2847d97ep@chr19:10983266..10983276, -
1.1e-59FFCP PHASE2:Hg19::chr4:167951900..167951907,-#_f368277acc3ff844cab9ba1b2847d97ep@chr4:167951900..167951907, -
1.1e-59FFCP PHASE2:Hg19::chr3:189266272..189266296,-#_f368277acc3ff844cab9ba1b2847d97ep@chr3:189266272..189266296, -
1.1e-59FFCP PHASE2:Hg19::chr6:149464325..149464336,-#_f368277acc3ff844cab9ba1b2847d97ep@chr6:149464325..149464336, -
1.1e-59FFCP PHASE2:Hg19::chr2:228216610..228216617,+#_f368277acc3ff844cab9ba1b2847d97ep18@MFF
1.1e-59FFCP PHASE2:Hg19::chr1:146746588..146746604,+#_f368277acc3ff844cab9ba1b2847d97ep5@CHD1L
1.1e-59FFCP PHASE2:Hg19::chr4:36393818..36393829,-#_f368277acc3ff844cab9ba1b2847d97ep2@ENST00000504344
1.1e-59FFCP PHASE1:Hg19::chr13:102271725..102271736,+#_f368277acc3ff844cab9ba1b2847d97ep@chr13:102271725..102271736, +
1.1e-59FFCP PHASE2:Hg19::chr19:42682291..42682301,-#_f368277acc3ff844cab9ba1b2847d97ep@chr19:42682291..42682301, -
1.1e-59FFCP PHASE1:Hg19::chr3:169775687..169775690,-#_f368277acc3ff844cab9ba1b2847d97ep@chr3:169775687..169775690, -
1.1e-59FFCP PHASE2:Hg19::chr7:106397647..106397655,+#_f368277acc3ff844cab9ba1b2847d97ep@chr7:106397647..106397655, +
1.1e-59FFCP PHASE1:Hg19::chr6:491208..491217,-#_f368277acc3ff844cab9ba1b2847d97ep@chr6:491208..491217, -
1.1e-59FFCP PHASE1:Hg19::chr3:111331533..111331540,-#_f368277acc3ff844cab9ba1b2847d97ep@chr3:111331533..111331540, -
1.1e-59FFCP PHASE2:Hg19::chr8:38216859..38216889,-#_f368277acc3ff844cab9ba1b2847d97ep@chr8:38216859..38216889, -
1.1e-59FFCP PHASE1:Hg19::chr7:106363986..106363994,-#_f368277acc3ff844cab9ba1b2847d97ep@chr7:106363986..106363994, -
1.1e-59FFCP PHASE2:Hg19::chr20:22771722..22771733,+#_f368277acc3ff844cab9ba1b2847d97ep@chr20:22771722..22771733, +
1.1e-59FFCP PHASE1:Hg19::chr12:130530117..130530125,-#_f368277acc3ff844cab9ba1b2847d97ep@chr12:130530117..130530125, -
1.1e-59FFCP PHASE1:Hg19::chr7:142250880..142250889,-#_f368277acc3ff844cab9ba1b2847d97ep4@AF430683, p4@AF430684, p4@AF430685
1.1e-59FFCP PHASE1:Hg19::chr4:167938808..167938815,-#_f368277acc3ff844cab9ba1b2847d97ep@chr4:167938808..167938815, -
1.1e-59FFCP PHASE2:Hg19::chr2:148282641..148282654,+#_f368277acc3ff844cab9ba1b2847d97ep@chr2:148282641..148282654, +
1.1e-59FFCP PHASE2:Hg19::chr14:76957775..76957781,+#_f368277acc3ff844cab9ba1b2847d97ep@chr14:76957775..76957781, +
1.1e-59FFCP PHASE1:Hg19::chr3:119279086..119279095,+#_f368277acc3ff844cab9ba1b2847d97ep@chr3:119279086..119279095, +
1.1e-59FFCP PHASE2:Hg19::chr9:74986248..74986275,-#_f368277acc3ff844cab9ba1b2847d97ep@chr9:74986248..74986275, -
1.1e-59FFCP PHASE1:Hg19::chr11:128154946..128154955,+#_f368277acc3ff844cab9ba1b2847d97ep@chr11:128154946..128154955, +
1.1e-59FFCP PHASE1:Hg19::chr7:135735084..135735112,+#_f368277acc3ff844cab9ba1b2847d97ep@chr7:135735084..135735112, +
1.1e-59FFCP PHASE1:Hg19::chr2:65209811..65209818,+#_f368277acc3ff844cab9ba1b2847d97ep@chr2:65209811..65209818, +
1.1e-59FFCP PHASE1:Hg19::chr2:148293218..148293252,+#_f368277acc3ff844cab9ba1b2847d97ep@chr2:148293218..148293252, +
1.1e-59FFCP PHASE1:Hg19::chr1:177159780..177159790,-#_f368277acc3ff844cab9ba1b2847d97ep@chr1:177159780..177159790, -
1.1e-59FFCP PHASE2:Hg19::chr2:53245239..53245255,-#_f368277acc3ff844cab9ba1b2847d97ep@chr2:53245239..53245255, -
1.1e-59FFCP PHASE1:Hg19::chr9:74997054..74997058,-#_f368277acc3ff844cab9ba1b2847d97ep@chr9:74997054..74997058, -
1.1e-59FFCP PHASE2:Hg19::chr3:180050773..180050786,+#_f368277acc3ff844cab9ba1b2847d97ep@chr3:180050773..180050786, +
1.1e-59FFCP PHASE2:Hg19::chr21:18170731..18170736,-#_f368277acc3ff844cab9ba1b2847d97ep@chr21:18170731..18170736, -
1.1e-59FFCP PHASE2:Hg19::chr11:128154946..128154955,+#_f368277acc3ff844cab9ba1b2847d97ep@chr11:128154946..128154955, +
1.1e-59FFCP PHASE1:Hg19::chr2:228216568..228216578,+#_f368277acc3ff844cab9ba1b2847d97ep15@MFF
1.1e-59FFCP PHASE2:Hg19::chr4:167983163..167983209,-#_f368277acc3ff844cab9ba1b2847d97ep@chr4:167983163..167983209, -
1.1e-59FFCP PHASE1:Hg19::chr20:33691683..33691699,+#_f368277acc3ff844cab9ba1b2847d97ep@chr20:33691683..33691699, +
1.1e-59FFCP PHASE1:Hg19::chr1:234765107..234765117,+#_f368277acc3ff844cab9ba1b2847d97ep7@LINC00184
1.1e-59FFCP PHASE1:Hg19::chr17:64034078..64034124,-#_f368277acc3ff844cab9ba1b2847d97ep@chr17:64034078..64034124, -
1.1e-59FFCP PHASE1:Hg19::chr19:53511749..53511757,-#_f368277acc3ff844cab9ba1b2847d97ep@chr19:53511749..53511757, -
1.1e-59FFCP PHASE1:Hg19::chr21:18179795..18179798,-#_f368277acc3ff844cab9ba1b2847d97ep@chr21:18179795..18179798, -
1.1e-59FFCP PHASE2:Hg19::chr17:1985278..1985290,-#_f368277acc3ff844cab9ba1b2847d97ep@chr17:1985278..1985290, -
1.1e-59FFCP PHASE1:Hg19::chr7:17543537..17543548,-#_f368277acc3ff844cab9ba1b2847d97ep@chr7:17543537..17543548, -
1.1e-59FFCP PHASE2:Hg19::chr6:42362820..42362827,-#_f368277acc3ff844cab9ba1b2847d97ep@chr6:42362820..42362827, -
1.1e-59FFCP PHASE2:Hg19::chr4:167932279..167932291,-#_f368277acc3ff844cab9ba1b2847d97ep@chr4:167932279..167932291, -
1.1e-59FFCP PHASE1:Hg19::chr10:120921395..120921406,-#_f368277acc3ff844cab9ba1b2847d97ep@chr10:120921395..120921406, -
1.1e-59FFCP PHASE2:Hg19::chr3:119281371..119281382,-#_f368277acc3ff844cab9ba1b2847d97ep@chr3:119281371..119281382, -
1.1e-59FFCP PHASE1:Hg19::chr13:101999642..101999655,-#_f368277acc3ff844cab9ba1b2847d97ep@chr13:101999642..101999655, -