UBERON:0006555: Difference between revisions
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0001008 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:42, 27 June 2012
| Name: | excretory tube |
|---|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000025(tube),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0001008(renal system) |
Children
| is a: | UBERON:0000056 (ureter),UBERON:0000083 (mesonephric tubule),UBERON:0006553 (renal duct),UBERON:0007684 (uriniferous tubule),UBERON:0009773 (renal tubule),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10290-104G2
- 10318-105A3
- 10346-105D4
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006555 (excretory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.12e-98 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 7.12e-98 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 2.81e-78 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 2.81e-78 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 1.04e-71 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.04e-71 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.28e-69 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 1.28e-69 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 4.01e-67 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 4.01e-67 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 1.1e-61 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 1.1e-61 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:43367743..43367754,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:43367743..43367754, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21380670..21380678,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21380670..21380678, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:12571679..12571688,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:12571679..12571688, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21385729..21385768,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21385729..21385768, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:54678902..54678911,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:54678902..54678911, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379437..31379448,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379437..31379448, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25349402..25349409,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Lcn12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:73221016..73221031,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:73221016..73221031, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:46041606..46041640,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:46041606..46041640, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:34813361..34813403,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:34813361..34813403, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:110773718..110773729,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:110773718..110773729, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:116901496..116901514,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:75293847..75293851,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:75293847..75293851, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51627616..51627623,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Rnase10 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:100634942..100634968,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:100634942..100634968, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152302813..152302821,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Defb20 |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:75798157..75798162,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:75798157..75798162, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379477..31379481,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379477..31379481, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164480465..164480471,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Wfdc9 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:24865194..24865204,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:24865194..24865204, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:20422498..20422506,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:20422498..20422506, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:103276578..103276585,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:103276578..103276585, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:33600466..33600491,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:33600466..33600491, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:151927980..151927988,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:151927980..151927988, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:103896072..103896081,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:103896072..103896081, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141429..19141440,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141429..19141440, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:75304900..75304907,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:75304900..75304907, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26785438..26785446,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Acad8 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:164464249..164464258,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:164464249..164464258, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:158083961..158083968,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Bpi |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26727675..26727681,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26727675..26727681, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:23308182..23308185,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:23308182..23308185, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:28772042..28772046,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:28772042..28772046, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90155966..90155989,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90155966..90155989, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:24270118..24270122,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:24270118..24270122, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:69116075..69116107,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:69116075..69116107, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:25706074..25706082,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Ido1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:107731917..107731926,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:107731917..107731926, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:103650817..103650825,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:103650817..103650825, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101958844..101958851,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101958844..101958851, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:155738967..155738974,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:155738967..155738974, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:59845376..59845393,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:59845376..59845393, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:85390145..85390153,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:85390145..85390153, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:52542661..52542668,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Rnase13 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379261..21379264,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379261..21379264, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr19:17591760..17591765,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr19:17591760..17591765, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379430..21379437,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379430..21379437, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:103896072..103896081,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:103896072..103896081, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26719400..26719404,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26719400..26719404, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:130496372..130496393,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496372..130496393, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:52542831..52542836,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Rnase13 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89597834..89597840,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:89597834..89597840, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:89597834..89597840,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:89597834..89597840, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:62775330..62775347,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:62775330..62775347, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:151928014..151928021,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:151928014..151928021, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:91753336..91753348,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:91753336..91753348, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:49817766..49817772,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:49817766..49817772, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:65941913..65941923,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:65941913..65941923, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:100350777..100350782, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:75866210..75866235, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379065..21379072, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:126591032..126591039,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:126591032..126591039, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:167688595..167688624,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:167688595..167688624, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:35249011..35249020,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:35249011..35249020, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:98567868..98567884,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Med24 |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:12571679..12571688,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:12571679..12571688, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26599476..26599505,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Glb1l2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:87922962..87922982,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:87922962..87922982, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:130496166..130496188,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496166..130496188, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:63611214..63611229,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:63611214..63611229, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379845..31379855,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379845..31379855, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141471..19141518,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141471..19141518, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:75798132..75798152,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:75798132..75798152, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:17224952..17224968,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:17224952..17224968, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:137325863..137325870,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p15@Alpl |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:18338054..18338077,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:18338054..18338077, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:112721323..112721328,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:112721323..112721328, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:22504758..22504766,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:22504758..22504766, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:56469136..56469145,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:56469136..56469145, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:35930706..35930717,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:35930706..35930717, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:134893699..134893708,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:134893699..134893708, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:165219453..165219469,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p11@Prrx1 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:62775330..62775347,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:62775330..62775347, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:50280126..50280140,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:50280126..50280140, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379972..31379981,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379972..31379981, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:148676859..148676866,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@9230104L09Rik |
