UBERON:0006598: Difference between revisions
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0000922 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:42, 27 June 2012
| Name: | presumptive structure | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: | "presumptive structures" EXACT [ZFA:0001116] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| part_of: | UBERON:0000922(embryo) |
Children
| is a: | UBERON:0003869 (presumptive ganglion),UBERON:0005424 (presumptive retinal pigmented epithelium),UBERON:0005425 (presumptive neural retina),UBERON:0006240 (future forebrain),UBERON:0006595 (presumptive endoderm),UBERON:0006596 (presumptive blood),UBERON:0006601 (presumptive ectoderm),UBERON:0006603 (presumptive mesoderm),UBERON:0007277 (presumptive hindbrain),UBERON:0007280 (presumptive endocardium),UBERON:0007282 (presumptive segmental plate),UBERON:0007284 (presumptive neural plate),UBERON:0007285 (presumptive paraxial mesoderm),UBERON:0007297 (presumptive pronephric mesoderm),UBERON:0009616 (presumptive midbrain),UBERON:0016880 (future nervous system) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006598 (presumptive structure), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.5e-31 | FFCP PHASE2:Hg19::chr20:23618584..23618603,-#_f17f83d9eca254d44a63157d888153f5 | p1@CST3 |
| 7.5e-31 | FFCP PHASE1:Hg19::chr20:23618584..23618603,-#_f17f83d9eca254d44a63157d888153f5 | p1@CST3 |
| 6.91e-29 | FFCP PHASE2:Hg19::chr13:77460532..77460548,-#_195842d7d8eb05225a7c3d3cace0d1e1 | p1@KCTD12 |
| 6.91e-29 | FFCP PHASE1:Hg19::chr13:77460532..77460548,-#_195842d7d8eb05225a7c3d3cace0d1e1 | p1@KCTD12 |
| 1.31e-28 | FFCP PHASE2:Hg19::chr13:45010939..45011033,-#_2606b14352643fd507ad806004e245d2 | p1@TSC22D1 |
| 1.31e-28 | FFCP PHASE1:Hg19::chr13:45010939..45011033,-#_2606b14352643fd507ad806004e245d2 | p1@TSC22D1 |
| 6.82e-28 | FFCP PHASE2:Hg19::chr2:230135937..230136016,-#_f154b2a93d5ba1df70866dff76d638d5 | p1@PID1 |
| 6.82e-28 | FFCP PHASE1:Hg19::chr2:230135937..230136016,-#_f154b2a93d5ba1df70866dff76d638d5 | p1@PID1 |
| 1.74e-26 | FFCP PHASE1:Hg19::chr7:111846435..111846471,-#_04ab0d85992818babf5a58c0fce6d307 | p1@DOCK4 |
| 1.74e-26 | FFCP PHASE2:Hg19::chr7:111846435..111846471,-#_04ab0d85992818babf5a58c0fce6d307 | p1@DOCK4 |
| 4.12e-26 | FFCP PHASE1:Hg19::chr11:1330834..1330875,-#_a87e8f2e24d3b66e12a165b0fc2be3eb | p1@TOLLIP |
| 4.12e-26 | FFCP PHASE2:Hg19::chr11:1330834..1330875,-#_a87e8f2e24d3b66e12a165b0fc2be3eb | p1@TOLLIP |
| 6.68e-25 | FFCP PHASE1:Hg19::chr12:112204714..112204781,+#_d8d0272b19db3f90599335363975a0ea | p1@ALDH2 |
| 6.68e-25 | FFCP PHASE2:Hg19::chr12:112204714..112204781,+#_d8d0272b19db3f90599335363975a0ea | p1@ALDH2 |
| 6.83e-25 | FFCP PHASE1:Hg19::chr13:77460594..77460613,-#_940686b6176540ddce46f682e7a0cea3 | p3@KCTD12 |
| 6.83e-25 | FFCP PHASE2:Hg19::chr13:77460594..77460613,-#_940686b6176540ddce46f682e7a0cea3 | p3@KCTD12 |
| 1.27e-24 | FFCP PHASE2:Hg19::chr4:85887789..85887862,-#_e042950c8fe16b5ffbc0c9498befdff7 | p1@WDFY3 |
| 1.27e-24 | FFCP PHASE1:Hg19::chr4:85887789..85887862,-#_e042950c8fe16b5ffbc0c9498befdff7 | p1@WDFY3 |
| 6.07e-24 | FFCP PHASE1:Hg19::chr16:4852616..4852679,-#_9fc6b6ecafef28bb84fe6d929ceaa152 | p1@ROGDI |
| 6.07e-24 | FFCP PHASE2:Hg19::chr16:4852616..4852679,-#_9fc6b6ecafef28bb84fe6d929ceaa152 | p1@ROGDI |
| 1.62e-23 | FFCP PHASE2:Hg19::chr1:183774240..183774270,+#_204aa6eef99a5ed8c70f78fbac76e590 | p1@RGL1 |
| 1.62e-23 | FFCP PHASE1:Hg19::chr1:183774240..183774270,+#_204aa6eef99a5ed8c70f78fbac76e590 | p1@RGL1 |
| 2.33e-23 | FFCP PHASE2:Hg19::chr8:30670289..30670354,-#_c83ac8fe2d2c60d457e17241b4c35ea6 | p1@PPP2CB |
| 2.33e-23 | FFCP PHASE1:Hg19::chr8:30670289..30670354,-#_c83ac8fe2d2c60d457e17241b4c35ea6 | p1@PPP2CB |
| 2.57e-23 | FFCP PHASE1:Hg19::chr13:77460635..77460654,-#_87927bc0de1b52271118fb2840d5d622 | p2@KCTD12 |
| 2.57e-23 | FFCP PHASE2:Hg19::chr13:77460635..77460654,-#_87927bc0de1b52271118fb2840d5d622 | p2@KCTD12 |
| 4.06e-23 | FFCP PHASE2:Hg19::chr4:159094160..159094185,-#_05808f67e423dbe21aa543f09091dd79 | p2@FAM198B |
| 4.06e-23 | FFCP PHASE1:Hg19::chr4:159094160..159094185,-#_05808f67e423dbe21aa543f09091dd79 | p2@FAM198B |
| 6.15e-23 | FFCP PHASE2:Hg19::chr15:90456156..90456198,-#_cfa0b63af092ef4eea499d85b9aead10 | p1@C15orf38 |
| 6.15e-23 | FFCP PHASE1:Hg19::chr15:90456156..90456198,-#_cfa0b63af092ef4eea499d85b9aead10 | p1@C15orf38 |
| 7.82e-23 | FFCP PHASE2:Hg19::chr19:40871734..40871809,+#_5fa6fafa7e1038bdb05646256887ab1a | p1@PLD3 |
| 7.82e-23 | FFCP PHASE1:Hg19::chr19:40871734..40871809,+#_5fa6fafa7e1038bdb05646256887ab1a | p1@PLD3 |
| 1.53e-22 | FFCP PHASE1:Hg19::chr16:2563989..2564006,+#_db023bc70c02be026201c6bcaf75d554 | p2@ATP6V0C |
| 1.53e-22 | FFCP PHASE2:Hg19::chr16:2563989..2564006,+#_db023bc70c02be026201c6bcaf75d554 | p2@ATP6V0C |
| 2.37e-22 | FFCP PHASE2:Hg19::chr20:35974484..35974529,+#_27b639f10ff9a7227308bd01087660d6 | p2@SRC |
| 2.37e-22 | FFCP PHASE1:Hg19::chr20:35974484..35974529,+#_27b639f10ff9a7227308bd01087660d6 | p2@SRC |
| 5.65e-22 | FFCP PHASE2:Hg19::chr11:65082349..65082378,+#_013d3edd1b67e08429866e37b3d7c8ae | p1@CDC42EP2 |
| 5.65e-22 | FFCP PHASE1:Hg19::chr11:65082349..65082378,+#_013d3edd1b67e08429866e37b3d7c8ae | p1@CDC42EP2 |
| 5.66e-22 | FFCP PHASE1:Hg19::chr17:1466030..1466129,-#_f5e7ac99a13011579f029597093dfa7c | p1@PITPNA |
| 5.66e-22 | FFCP PHASE2:Hg19::chr17:1466030..1466129,-#_f5e7ac99a13011579f029597093dfa7c | p1@PITPNA |
| 5.93e-22 | FFCP PHASE2:Hg19::chr19:6720653..6720670,-#_dcfb43c0b92c13c55cee12f50f329d52 | p1@C3 |
| 5.93e-22 | FFCP PHASE1:Hg19::chr19:6720653..6720670,-#_dcfb43c0b92c13c55cee12f50f329d52 | p1@C3 |
| 6.18e-22 | FFCP PHASE1:Hg19::chr7:2671611..2671658,+#_41162346763ae57424cfeb334646ebda | p2@TTYH3 |
| 6.18e-22 | FFCP PHASE2:Hg19::chr7:2671611..2671658,+#_41162346763ae57424cfeb334646ebda | p2@TTYH3 |
| 1.1e-21 | FFCP PHASE2:Hg19::chr2:127864839..127864888,-#_ac7d17c741d0421967963f85407327db | p2@BIN1 |
| 1.1e-21 | FFCP PHASE1:Hg19::chr2:127864839..127864888,-#_ac7d17c741d0421967963f85407327db | p2@BIN1 |
| 2.41e-21 | FFCP PHASE1:Hg19::chr17:73851380..73851427,-#_871daaa89a5ae1c0ae6c164cf6ef49eb | p1@WBP2 |
| 2.41e-21 | FFCP PHASE2:Hg19::chr17:73851380..73851427,-#_871daaa89a5ae1c0ae6c164cf6ef49eb | p1@WBP2 |
| 3.59e-21 | FFCP PHASE2:Hg19::chr22:31003154..31003188,+#_937a8c55b1896d9a6ecadc7a17a6bfcc | p1@TCN2 |
| 3.59e-21 | FFCP PHASE1:Hg19::chr22:31003154..31003188,+#_937a8c55b1896d9a6ecadc7a17a6bfcc | p1@TCN2 |
| 3.69e-21 | FFCP PHASE2:Hg19::chr9:14314566..14314618,-#_71f74c7a7b1d95c801616dac960849d3 | p1@NFIB |
| 3.69e-21 | FFCP PHASE1:Hg19::chr9:14314566..14314618,-#_71f74c7a7b1d95c801616dac960849d3 | p1@NFIB |
| 4.02e-21 | FFCP PHASE1:Hg19::chr9:14314131..14314147,-#_1b49a5fbd65f2e152f09ddbd1e86e062 | p2@NFIB |
| 4.02e-21 | FFCP PHASE2:Hg19::chr9:14314131..14314147,-#_1b49a5fbd65f2e152f09ddbd1e86e062 | p2@NFIB |
| 4.54e-21 | FFCP PHASE2:Hg19::chr19:44100155..44100211,-#_0da997db29a0a803faf8b17891d88664 | p1@IRGQ |
| 4.54e-21 | FFCP PHASE1:Hg19::chr19:44100155..44100211,-#_0da997db29a0a803faf8b17891d88664 | p1@IRGQ |
| 5.7e-21 | FFCP PHASE2:Hg19::chr4:24914581..24914691,-#_d67bd090984e49bf1ff3e5f9c4749038 | p1@CCDC149 |
| 5.7e-21 | FFCP PHASE1:Hg19::chr4:24914581..24914691,-#_d67bd090984e49bf1ff3e5f9c4749038 | p1@CCDC149 |
| 6.27e-21 | FFCP PHASE2:Hg19::chr2:127864608..127864688,-#_129a188aed38e04b9479b4d9f0cf19bd | p1@BIN1 |
| 6.27e-21 | FFCP PHASE1:Hg19::chr2:127864608..127864688,-#_129a188aed38e04b9479b4d9f0cf19bd | p1@BIN1 |
| 1.02e-20 | FFCP PHASE1:Hg19::chr19:14228541..14228582,-#_d97d2534c6952440d1db296cba501849 | p1@PRKACA |
| 1.02e-20 | FFCP PHASE2:Hg19::chr19:14228541..14228582,-#_d97d2534c6952440d1db296cba501849 | p1@PRKACA |
| 1.29e-20 | FFCP PHASE2:Hg19::chr16:89787269..89787359,-#_b39bb5eda424220af35b35bc8880b651 | p1@C16orf7 |
| 1.29e-20 | FFCP PHASE1:Hg19::chr16:89787269..89787359,-#_b39bb5eda424220af35b35bc8880b651 | p1@C16orf7 |
| 1.45e-20 | FFCP PHASE2:Hg19::chr1:10270620..10270637,+#_eafc3be3c9786a8f15a0777780afa5fa | p1@KIF1B |
| 1.45e-20 | FFCP PHASE1:Hg19::chr1:10270620..10270637,+#_eafc3be3c9786a8f15a0777780afa5fa | p1@KIF1B |
| 2.63e-20 | FFCP PHASE2:Hg19::chr18:59561635..59561651,-#_78d003252d898674989d9493c1e25662 | p@chr18:59561635..59561651, - |
| 2.63e-20 | FFCP PHASE1:Hg19::chr18:59561635..59561651,-#_78d003252d898674989d9493c1e25662 | p@chr18:59561635..59561651, - |
| 3.08e-20 | FFCP PHASE1:Hg19::chr12:52345448..52345532,+#_e0f42cfa6eac425a237ee4c53321da20 | p1@ACVR1B |
| 3.08e-20 | FFCP PHASE2:Hg19::chr12:52345448..52345532,+#_e0f42cfa6eac425a237ee4c53321da20 | p1@ACVR1B |
| 3.96e-20 | FFCP PHASE2:Hg19::chr20:23614485..23614564,-#_7a1e3bf234eb26215e3152081c13ee4c | p@chr20:23614485..23614564, - |
| 3.96e-20 | FFCP PHASE1:Hg19::chr20:23614485..23614564,-#_7a1e3bf234eb26215e3152081c13ee4c | p@chr20:23614485..23614564, - |
| 5.35e-20 | FFCP PHASE2:Hg19::chr1:68698197..68698214,-#_b7bac6b53ac7596a91ed4816d2d9d5ed | p1@WLS |
| 5.35e-20 | FFCP PHASE1:Hg19::chr1:68698197..68698214,-#_b7bac6b53ac7596a91ed4816d2d9d5ed | p1@WLS |
| 6.51e-20 | FFCP PHASE2:Hg19::chr10:30025922..30025958,-#_b51cb8a0453fe5936e1656c5db3580c9 | p3@SVIL |
| 6.51e-20 | FFCP PHASE1:Hg19::chr10:30025922..30025958,-#_b51cb8a0453fe5936e1656c5db3580c9 | p3@SVIL |
| 6.99e-20 | FFCP PHASE1:Hg19::chr15:64995399..64995422,-#_50c4be9cfd7e7c8057f588ccbfda1927 | p1@OAZ2 |
| 6.99e-20 | FFCP PHASE2:Hg19::chr15:64995399..64995422,-#_50c4be9cfd7e7c8057f588ccbfda1927 | p1@OAZ2 |
| 8.06e-20 | FFCP PHASE1:Hg19::chr9:34989685..34989748,+#_09cfa4f18a19e6fe6424f200c3b318e5 | p1@DNAJB5 |
| 8.06e-20 | FFCP PHASE2:Hg19::chr9:34989685..34989748,+#_09cfa4f18a19e6fe6424f200c3b318e5 | p1@DNAJB5 |
| 9.9e-20 | FFCP PHASE2:Hg19::chrX:100333858..100333876,+#_548aaf3616a9ea836f2761528c06daed | p1@TMEM35 |
| 9.9e-20 | FFCP PHASE1:Hg19::chrX:100333858..100333876,+#_548aaf3616a9ea836f2761528c06daed | p1@TMEM35 |
| 1.09e-19 | FFCP PHASE2:Hg19::chr16:2563941..2563983,+#_8e0e82c46915bcf6f3357e5cfbb86ac3 | p1@ATP6V0C |
| 1.09e-19 | FFCP PHASE1:Hg19::chr16:2563941..2563983,+#_8e0e82c46915bcf6f3357e5cfbb86ac3 | p1@ATP6V0C |
| 1.11e-19 | FFCP PHASE2:Hg19::chr17:68165657..68165688,+#_439b8e4645b7e225a52bf5fc14489ce1 | p1@KCNJ2 |
| 1.11e-19 | FFCP PHASE1:Hg19::chr17:68165657..68165688,+#_439b8e4645b7e225a52bf5fc14489ce1 | p1@KCNJ2 |
| 1.12e-19 | FFCP PHASE2:Hg19::chr17:7492684..7492778,-#_c27ff14ce93dc3c445ababf7b3acd668 | p2@SOX15 |
| 1.12e-19 | FFCP PHASE1:Hg19::chr17:7492684..7492778,-#_c27ff14ce93dc3c445ababf7b3acd668 | p2@SOX15 |
| 1.16e-19 | FFCP PHASE1:Hg19::chr19:11466086..11466159,+#_76da0245f7fd30222ecb69f5c458c43b | p1@LPPR2 |
| 1.16e-19 | FFCP PHASE2:Hg19::chr19:11466086..11466159,+#_76da0245f7fd30222ecb69f5c458c43b | p1@LPPR2 |
| 1.32e-19 | FFCP PHASE2:Hg19::chr18:59561658..59561685,-#_39dfeb63cd68809c69df3b1f00c5b505 | p@chr18:59561658..59561685, - |
| 1.32e-19 | FFCP PHASE1:Hg19::chr18:59561658..59561685,-#_39dfeb63cd68809c69df3b1f00c5b505 | p@chr18:59561658..59561685, - |
| 1.38e-19 | FFCP PHASE1:Hg19::chr12:110719036..110719113,+#_3e8fc87f222c225d3ded29a4e41e273d | p1@ATP2A2 |
| 1.38e-19 | FFCP PHASE2:Hg19::chr12:110719036..110719113,+#_3e8fc87f222c225d3ded29a4e41e273d | p1@ATP2A2 |
| 1.45e-19 | FFCP PHASE1:Hg19::chr6:123110389..123110441,+#_85c308015d235172ca633d5abcf2835a | p1@SMPDL3A |
| 1.45e-19 | FFCP PHASE2:Hg19::chr6:123110389..123110441,+#_85c308015d235172ca633d5abcf2835a | p1@SMPDL3A |
| 1.86e-19 | FFCP PHASE1:Hg19::chr10:118764649..118764683,-#_9dc1a3c16cf3d7434f3c77720b221efb | p2@KIAA1598 |
| 1.86e-19 | FFCP PHASE2:Hg19::chr10:118764649..118764683,-#_9dc1a3c16cf3d7434f3c77720b221efb | p2@KIAA1598 |
| 3.3e-19 | FFCP PHASE2:Hg19::chr2:153191678..153191697,+#_3ee9cd9d2630cbdc39780e6b20a31888 | p1@FMNL2 |
| 3.3e-19 | FFCP PHASE1:Hg19::chr2:153191678..153191697,+#_3ee9cd9d2630cbdc39780e6b20a31888 | p1@FMNL2 |
