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{{CL
{{CL
|id=CL:0000680
|alt_id=
|name=muscle precursor cell
|namespace=cell
|def=
|xref=
|is_a=CL:0000055;;CL:0002371
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=CL:0000222
|develops_from=CL:0000222
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000680
|is_a=CL:0000055 ;;CL:0002371
|is_obsolete=
|located_in=
|located_in=
|name=muscle precursor cell
|namespace=cell
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Revision as of 10:19, 12 September 2014

Name:muscle precursor cell
Namespace:cell


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000055(non-terminally differentiated cell),CL:0002371(somatic cell)
develops_from:CL:0000222(mesodermal cell)



Children


is a:CL:0000056 (myoblast),CL:0000594 (skeletal muscle satellite cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000680 (muscle precursor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.36e-86FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_3eab162da9f2fce23e1e965e3359bce5p@chrX:160838683..160838694, +
1.36e-86FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_3eab162da9f2fce23e1e965e3359bce5p@chrX:160838683..160838694, +
1.01e-74FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_b898ded0601f5898b9bac28c56d8d323p@chrX:65748600..65748616, +
1.01e-74FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_b898ded0601f5898b9bac28c56d8d323p@chr12:105433069..105433075, -
1.01e-74FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_b898ded0601f5898b9bac28c56d8d323p@chrX:65748600..65748616, +
1.01e-74FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_b898ded0601f5898b9bac28c56d8d323p@chr12:105433069..105433075, -
2.48e-72FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_da2cae1ef22318d80f6b4e608de234f7p@chrX:160838787..160838800, +
2.48e-72FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_da2cae1ef22318d80f6b4e608de234f7p@chrX:160838787..160838800, +
1.74e-65FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_0d5d8fd7ccb5ae76d2ce0accdaf074d5p@chr11:81849982..81850000, +
1.74e-65FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_0d5d8fd7ccb5ae76d2ce0accdaf074d5p@chr11:81849982..81850000, +
1.33e-60FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_6da7eb1b621d3e83418473e63cf6e8a9p@chr17:14813242..14813246, -
1.33e-60FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_6da7eb1b621d3e83418473e63cf6e8a9p@chr17:14813242..14813246, -
1.36e-58FFCP PHASE1:Mm9::chr1:127573795..127573810,+#_940a10c1cdb72ef7c9b7f0ba9cd26103p4@Gpr39
1.36e-58FFCP PHASE2:Mm9::chr1:127573795..127573810,+#_940a10c1cdb72ef7c9b7f0ba9cd26103p4@Gpr39
3.91e-58FFCP PHASE2:Mm9::chrX:160823859..160823870,+#_41c3605aa82a4046b2a6ba36f7454f20p@chrX:160823859..160823870, +
3.91e-58FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_41c3605aa82a4046b2a6ba36f7454f20p@chrX:160840025..160840037, +
3.91e-58FFCP PHASE1:Mm9::chrX:160823859..160823870,+#_41c3605aa82a4046b2a6ba36f7454f20p@chrX:160823859..160823870, +
3.91e-58FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_41c3605aa82a4046b2a6ba36f7454f20p@chrX:160840025..160840037, +
3.91e-58FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_41c3605aa82a4046b2a6ba36f7454f20p@chrX:160840048..160840057, +
3.91e-58FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_41c3605aa82a4046b2a6ba36f7454f20p@chrX:160840048..160840057, +
1.02e-52FFCP PHASE1:Mm9::chr3:79689074..79689090,+#_3901c1d63b59a5b2b4cad6c990354f42p11@Fam198b
1.02e-52FFCP PHASE2:Mm9::chr3:79689074..79689090,+#_3901c1d63b59a5b2b4cad6c990354f42p11@Fam198b
1.99e-52FFCP PHASE1:Mm9::chr1:127574253..127574264,+#_d05b827861aed0d97b93c89fbb423bc9p@chr1:127574253..127574264, +
1.99e-52FFCP PHASE2:Mm9::chr1:127574253..127574264,+#_d05b827861aed0d97b93c89fbb423bc9p@chr1:127574253..127574264, +
3.23e-52FFCP PHASE1:Mm9::chr1:127573733..127573745,+#_712143f14cc0bd1aa940237eccbca528p7@Gpr39
3.23e-52FFCP PHASE2:Mm9::chr1:127573733..127573745,+#_712143f14cc0bd1aa940237eccbca528p7@Gpr39
4.11e-52FFCP PHASE1:Mm9::chr1:127573690..127573699,+#_25a812f89e7a67597fb20e11346784a1p11@Gpr39
4.11e-52FFCP PHASE2:Mm9::chr1:127573690..127573699,+#_25a812f89e7a67597fb20e11346784a1p11@Gpr39
5.23e-52FFCP PHASE2:Mm9::chrX:160839768..160839780,+#_bed0e6d699f6815aac4bff35b8f7e4ddp@chrX:160839768..160839780, +
5.23e-52FFCP PHASE1:Mm9::chrX:160839768..160839780,+#_bed0e6d699f6815aac4bff35b8f7e4ddp@chrX:160839768..160839780, +
1.37e-51FFCP PHASE1:Mm9::chr1:127573462..127573472,+#_61e92ddc285e03bef81b2061eb678e9dp8@Gpr39
1.37e-51FFCP PHASE2:Mm9::chr1:127573462..127573472,+#_61e92ddc285e03bef81b2061eb678e9dp8@Gpr39
9.51e-51FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_752ec6394fe57fe96bb0c40ced7ea475p@chr6:53359400..53359406, +
9.51e-51FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_752ec6394fe57fe96bb0c40ced7ea475p@chr6:53359400..53359406, +
3.73e-48FFCP PHASE2:Mm9::chr7:96658543..96658553,-#_035ee46cb2207ea4b3c22ffb6fd32986p@chr7:96658543..96658553, -
3.73e-48FFCP PHASE1:Mm9::chr7:96658543..96658553,-#_035ee46cb2207ea4b3c22ffb6fd32986p@chr7:96658543..96658553, -
6.34e-47FFCP PHASE2:Mm9::chr5:30339923..30339935,+#_bed1342a7344644b22397d34d720d855p2@Il6
6.34e-47FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_bed1342a7344644b22397d34d720d855p@chr7:91081998..91082010, -
6.34e-47FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_bed1342a7344644b22397d34d720d855p@chr7:91081998..91082010, -
6.34e-47FFCP PHASE1:Mm9::chr5:30339923..30339935,+#_bed1342a7344644b22397d34d720d855p2@Il6
7.16e-47FFCP PHASE2:Mm9::chr18:52678391..52678395,-#_433968ea72673ca56fdda1a6f3563f59p@chr18:52678391..52678395, -
7.16e-47FFCP PHASE1:Mm9::chr18:52678391..52678395,-#_433968ea72673ca56fdda1a6f3563f59p@chr18:52678391..52678395, -
8.31e-47FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_cd5793a7f0c9e6c15adf9fb0be034577p@chr10:67598037..67598049, -
8.31e-47FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_cd5793a7f0c9e6c15adf9fb0be034577p@chr10:67598037..67598049, -
1.86e-46FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_7c3407716ef9383983d3933eadf7ed3bp@chr2:65009852..65009866, -
1.86e-46FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_7c3407716ef9383983d3933eadf7ed3bp@chr2:65009852..65009866, -
5.11e-46FFCP PHASE2:Mm9::chr6:91222095..91222107,+#_cebfc75f81eb3c6507b4481fe51a3b55p@chr6:91222095..91222107, +
5.11e-46FFCP PHASE1:Mm9::chr6:91222095..91222107,+#_cebfc75f81eb3c6507b4481fe51a3b55p@chr6:91222095..91222107, +
7.81e-46FFCP PHASE2:Mm9::chr5:114822634..114822665,-#_4311a8b43f51237726669147a8a49630p9@Kctd10
7.81e-46FFCP PHASE1:Mm9::chr5:114822634..114822665,-#_4311a8b43f51237726669147a8a49630p9@Kctd10
9.65e-46FFCP PHASE1:Mm9::chr1:127573773..127573786,+#_965fc646a9b5e9d1c6be3814b8020aa3p6@Gpr39
9.65e-46FFCP PHASE2:Mm9::chr1:127573773..127573786,+#_965fc646a9b5e9d1c6be3814b8020aa3p6@Gpr39
1.69e-44FFCP PHASE1:Mm9::chrX:70740923..70740934,+#_47970f039548983042f9f99ca98d7537p@chrX:70740923..70740934, +
1.69e-44FFCP PHASE2:Mm9::chrX:70740923..70740934,+#_47970f039548983042f9f99ca98d7537p@chrX:70740923..70740934, +
5.38e-44FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_5186c9b09f2b636e117b6f63c57bcf79p@chr17:87574327..87574332, +
5.38e-44FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_5186c9b09f2b636e117b6f63c57bcf79p@chr17:14827154..14827169, -
5.38e-44FFCP PHASE1:Mm9::chrX:160829660..160829667,+#_5186c9b09f2b636e117b6f63c57bcf79p14@Figf
5.38e-44FFCP PHASE1:Mm9::chr9:102766842..102766853,+#_5186c9b09f2b636e117b6f63c57bcf79p@chr9:102766842..102766853, +
5.38e-44FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_5186c9b09f2b636e117b6f63c57bcf79p@chr2:178190171..178190178, +
5.38e-44FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_5186c9b09f2b636e117b6f63c57bcf79p@chr17:14802633..14802637, -
5.38e-44FFCP PHASE1:Mm9::chr7:106471695..106471701,+#_5186c9b09f2b636e117b6f63c57bcf79p@chr7:106471695..106471701, +
5.38e-44FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_5186c9b09f2b636e117b6f63c57bcf79p@chrX:160839744..160839754, +
5.38e-44FFCP PHASE1:Mm9::chr16:85900926..85900936,-#_5186c9b09f2b636e117b6f63c57bcf79p9@Adamts5
5.38e-44FFCP PHASE1:Mm9::chr19:20567096..20567107,+#_5186c9b09f2b636e117b6f63c57bcf79p3@E030003E18Rik
5.38e-44FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_5186c9b09f2b636e117b6f63c57bcf79p@chr2:178190171..178190178, +
5.38e-44FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_5186c9b09f2b636e117b6f63c57bcf79p@chr2:112043522..112043530, -
5.38e-44FFCP PHASE2:Mm9::chr7:106471695..106471701,+#_5186c9b09f2b636e117b6f63c57bcf79p@chr7:106471695..106471701, +
5.38e-44FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_5186c9b09f2b636e117b6f63c57bcf79p5@Adamts2
5.38e-44FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_5186c9b09f2b636e117b6f63c57bcf79p@chr8:69228447..69228492, +
5.38e-44FFCP PHASE2:Mm9::chrX:160839338..160839364,+#_5186c9b09f2b636e117b6f63c57bcf79p@chrX:160839338..160839364, +
5.38e-44FFCP PHASE2:Mm9::chr19:20567096..20567107,+#_5186c9b09f2b636e117b6f63c57bcf79p3@E030003E18Rik
5.38e-44FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_5186c9b09f2b636e117b6f63c57bcf79p@chr8:69228447..69228492, +
5.38e-44FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_5186c9b09f2b636e117b6f63c57bcf79p@chr17:14827154..14827169, -
5.38e-44FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_5186c9b09f2b636e117b6f63c57bcf79p5@Adamts2
5.38e-44FFCP PHASE2:Mm9::chr9:102766842..102766853,+#_5186c9b09f2b636e117b6f63c57bcf79p@chr9:102766842..102766853, +
5.38e-44FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_5186c9b09f2b636e117b6f63c57bcf79p@chr17:14802633..14802637, -
5.38e-44FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_5186c9b09f2b636e117b6f63c57bcf79p@chr17:87574327..87574332, +
5.38e-44FFCP PHASE2:Mm9::chrX:160829660..160829667,+#_5186c9b09f2b636e117b6f63c57bcf79p14@Figf
5.38e-44FFCP PHASE1:Mm9::chrX:160839338..160839364,+#_5186c9b09f2b636e117b6f63c57bcf79p@chrX:160839338..160839364, +
5.38e-44FFCP PHASE1:Mm9::chr9:56096674..56096680,+#_5186c9b09f2b636e117b6f63c57bcf79p@chr9:56096674..56096680, +
5.38e-44FFCP PHASE2:Mm9::chr9:56096674..56096680,+#_5186c9b09f2b636e117b6f63c57bcf79p@chr9:56096674..56096680, +
5.38e-44FFCP PHASE2:Mm9::chr16:85900926..85900936,-#_5186c9b09f2b636e117b6f63c57bcf79p9@Adamts5
5.38e-44FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_5186c9b09f2b636e117b6f63c57bcf79p@chr2:112043522..112043530, -
5.38e-44FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_5186c9b09f2b636e117b6f63c57bcf79p@chrX:160839744..160839754, +
2.46e-41FFCP PHASE1:Mm9::chrX:160832435..160832462,+#_7f894070090dd1d693c5b2774d7cc915p@chrX:160832435..160832462, +
2.46e-41FFCP PHASE2:Mm9::chrX:160839194..160839217,+#_7f894070090dd1d693c5b2774d7cc915p@chrX:160839194..160839217, +
2.46e-41FFCP PHASE1:Mm9::chrX:160839194..160839217,+#_7f894070090dd1d693c5b2774d7cc915p@chrX:160839194..160839217, +
2.46e-41FFCP PHASE2:Mm9::chrX:160832435..160832462,+#_7f894070090dd1d693c5b2774d7cc915p@chrX:160832435..160832462, +
4.98e-41FFCP PHASE2:Mm9::chr6:91220024..91220048,+#_c8553b0d22e7bc9523b1eba41a03065ap@chr6:91220024..91220048, +
4.98e-41FFCP PHASE1:Mm9::chr6:91220024..91220048,+#_c8553b0d22e7bc9523b1eba41a03065ap@chr6:91220024..91220048, +
3.93e-40FFCP PHASE1:Mm9::chr9:102622418..102622429,+#_d7ec30a66bd33dbb2cd65a4911a24badp10@Amotl2
3.93e-40FFCP PHASE2:Mm9::chr9:102622418..102622429,+#_d7ec30a66bd33dbb2cd65a4911a24badp10@Amotl2
4.96e-40FFCP PHASE2:Hg19::chr10:49813077..49813087,-#_f7947951dad875b15273f6abaa59c35fp8@ARHGAP22
4.96e-40FFCP PHASE1:Hg19::chr10:49813077..49813087,-#_f7947951dad875b15273f6abaa59c35fp8@ARHGAP22
7.49e-40FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_635a6a23313180fbed750ff5d5fa48e7p2@LRRC17
7.49e-40FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_635a6a23313180fbed750ff5d5fa48e7p2@LRRC17
1.92e-39FFCP PHASE2:Mm9::chr1:127573864..127573879,+#_5ec92b8bbbc2013b5cec40fb147f786cp10@Gpr39
1.92e-39FFCP PHASE1:Mm9::chr1:127573864..127573879,+#_5ec92b8bbbc2013b5cec40fb147f786cp10@Gpr39
3.01e-39FFCP PHASE1:Mm9::chrX:160839663..160839673,+#_7812f080945ea2aa8c373280d2b26822p@chrX:160839663..160839673, +
3.01e-39FFCP PHASE2:Mm9::chr10:96946041..96946050,+#_7812f080945ea2aa8c373280d2b26822p@chr10:96946041..96946050, +

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