UBERON:0006555: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0006555 | |||
|is_a=UBERON:0000025 ;;UBERON:0006554 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=excretory tube | |||
|namespace= | |||
|obo_creation_date= | |||
|part_of=UBERON:0001008 | |part_of=UBERON:0001008 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Revision as of 11:40, 12 September 2014
| Name: | excretory tube |
|---|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000025(tube),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0001008(renal system) |
Children
| is a: | UBERON:0000056 (ureter),UBERON:0000083 (mesonephric tubule),UBERON:0006553 (renal duct),UBERON:0007684 (uriniferous tubule),UBERON:0009773 (renal tubule),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10290-104G2
- 10318-105A3
- 10346-105D4
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006555 (excretory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.12e-98 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 7.12e-98 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 2.81e-78 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 2.81e-78 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 1.04e-71 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.04e-71 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.28e-69 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 1.28e-69 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 4.01e-67 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 4.01e-67 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 1.1e-61 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 1.1e-61 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:63611303..63611312,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:63611303..63611312, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101959282..101959299, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:156048695..156048707, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141482..19141496,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141482..19141496, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr3:65253465..65253475,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:65253465..65253475, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:110131610..110131621,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p11@Wars |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:70779586..70779596, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Gm6792 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:114385720..114385732, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:66589365..66589371,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p19@Clu |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:91107095..91107103, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379377..31379384,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379377..31379384, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:92995710..92995753, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:50280199..50280211,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:50280199..50280211, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:148676901..148676906,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p8@9230104L09Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:96150839..96150842,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:96150839..96150842, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:25706249..25706254,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:25706249..25706254, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:34107562..34107572,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:34107562..34107572, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:155722142..155722175, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:23683348..23683398,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:23683348..23683398, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:110773731..110773753,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:110773731..110773753, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:158083973..158083982,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Bpi |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:28323634..28323657,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:28323634..28323657, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr19:17585885..17585901,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr19:17585885..17585901, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:10488683..10488691,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:10488683..10488691, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379322..21379338,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379322..21379338, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35651807..35651818,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@9230110F15Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:44319583..44319592,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:44319583..44319592, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:18338054..18338077, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26731771..26731780,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26731771..26731780, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:42151966..42151976,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p9@Tecta |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:109379335..109379338,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p21@Pgap2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90155923..90155932,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90155923..90155932, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:44319583..44319592,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:44319583..44319592, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:35930706..35930717,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:35930706..35930717, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:148676901..148676906,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p8@9230104L09Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379430..21379437,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379430..21379437, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr3:107731917..107731926,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:107731917..107731926, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:83487114..83487124,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:83487114..83487124, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:103276578..103276585,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:103276578..103276585, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26704579..26704582,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26704579..26704582, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:118298429..118298448,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:118298429..118298448, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155951..90155962,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90155951..90155962, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379125..21379144, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:23045782..23045791,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:23045782..23045791, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:155697874..155697885,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:155697874..155697885, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:36016859..36016897, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35657485..35657490,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Gm3428 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:52542711..52542716,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Rnase13 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:103837894..103837900,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:103837894..103837900, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p11@Wars |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:113585714..113585722,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:113585714..113585722, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:20817297..20817313,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:20817297..20817313, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:116901482..116901494,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@ENSMUST00000152401 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:16664708..16664723,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:16664708..16664723, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:75798157..75798162,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:75798157..75798162, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:160573108..160573123, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:110773795..110773801,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:110773795..110773801, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:35930667..35930691, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:77645280..77645295,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:77645280..77645295, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89597660..89597668,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:89597660..89597668, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:114385720..114385732,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:114385720..114385732, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:52712765..52712772,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:52712765..52712772, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35585507..35585517,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Gm17727 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51734060..51734066,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Eddm3b |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379486..31379501, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:168436322..168436326,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:168436322..168436326, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51677141..51677148,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p7@Rnase12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378927..21378932,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378927..21378932, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:75798097..75798101,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:75798097..75798101, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:22061771..22061777,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Gm6040, p3@LOC100503992 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:160347529..160347538,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:160347529..160347538, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:43367743..43367754, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:96150839..96150842,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:96150839..96150842, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152302739..152302742,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Defb20 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:98567868..98567884,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Med24 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101958855..101958871,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101958855..101958871, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:63611201..63611210,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:63611201..63611210, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21381777..21381789,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21381777..21381789, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101958887..101958896,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101958887..101958896, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141371..19141383,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141371..19141383, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152290340..152290344,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Defb23 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:73221062..73221084,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:73221062..73221084, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:52712765..52712772,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:52712765..52712772, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:53937918..53937922,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p7@P4ha2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:56772735..56772741,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:56772735..56772741, + |
