FFCP PHASE1:Hg19::chr14:61747949..61747974,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002076!2.75e-15!43;CL:0000066!1.43e-10!254;CL:0000223!1.43e-09!59;CL:0002368!1.21e-08!13;CL:0002251!6.41e-07!21 | |ontology_enrichment_celltype=CL:0002076!2.75e-15!43;CL:0000066!1.43e-10!254;CL:0000223!1.43e-09!59;CL:0002368!1.21e-08!13;CL:0002251!6.41e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.49e-16;42!CL:0002368;1.26e-10;13!CL:0002251;1.08e-08;20!CL:0002202;5.69e-07;9!CL:0002632;5.69e-07;9 | |ontology_enrichment_celltype_v019=CL:0002076;6.49e-16;42!CL:0002368;1.26e-10;13!CL:0002251;1.08e-08;20!CL:0002202;5.69e-07;9!CL:0002632;5.69e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.64e-20,42;CL:0000066,8.13e-14,253;CL:0000223,1.91e-13,58;CL:0002368,1.26e-10,13;CL:0002251,9.55e-09,20;CL:0002202,5.38e-07,9;CL:0002632,5.38e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006595;4.08e-08;86!CL:0000223;2.10e-07;58 | |ontology_enrichment_development_v019=UBERON:0006595;4.08e-08;86!CL:0000223;2.10e-07;58 | ||
|ontology_enrichment_disease=DOID:1749!1.22e-10!14;DOID:305!1.23e-09!106;DOID:299!7.47e-07!25 | |ontology_enrichment_disease=DOID:1749!1.22e-10!14;DOID:305!1.23e-09!106;DOID:299!7.47e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.12e-13;14!DOID:299;4.54e-09;25 | |ontology_enrichment_disease_v019=DOID:1749;4.12e-13;14!DOID:299;4.54e-09;25 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,3.82e-13,14;DOID:305,1.39e-12,106;DOID:299,3.65e-09,25;DOID:0050687,9.87e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.72e-19!169;UBERON:0000925!1.72e-19!169;UBERON:0006595!1.72e-19!169;UBERON:0001007!3.42e-15!155;UBERON:0001555!3.42e-15!155;UBERON:0007026!3.42e-15!155;UBERON:0004921!1.69e-13!129;UBERON:0004185!1.69e-13!129;UBERON:0001004!1.01e-11!72;UBERON:0000077!2.20e-11!130;UBERON:0005911!1.12e-10!82;UBERON:0005153!3.99e-09!37;UBERON:0000065!4.20e-09!53;UBERON:0007023!6.82e-09!115;UBERON:0005181!1.11e-08!35;UBERON:0005178!2.19e-08!34;UBERON:0002224!2.19e-08!34;UBERON:0000464!3.12e-08!104;UBERON:0005157!5.68e-08!51;UBERON:0000161!1.16e-07!35;UBERON:0001041!2.61e-07!98;UBERON:0000466!2.82e-07!126;UBERON:0000974!3.85e-07!10;UBERON:0000344!4.80e-07!12;UBERON:0000915!7.87e-07!52 | |ontology_enrichment_uberon=UBERON:0004119!1.72e-19!169;UBERON:0000925!1.72e-19!169;UBERON:0006595!1.72e-19!169;UBERON:0001007!3.42e-15!155;UBERON:0001555!3.42e-15!155;UBERON:0007026!3.42e-15!155;UBERON:0004921!1.69e-13!129;UBERON:0004185!1.69e-13!129;UBERON:0001004!1.01e-11!72;UBERON:0000077!2.20e-11!130;UBERON:0005911!1.12e-10!82;UBERON:0005153!3.99e-09!37;UBERON:0000065!4.20e-09!53;UBERON:0007023!6.82e-09!115;UBERON:0005181!1.11e-08!35;UBERON:0005178!2.19e-08!34;UBERON:0002224!2.19e-08!34;UBERON:0000464!3.12e-08!104;UBERON:0005157!5.68e-08!51;UBERON:0000161!1.16e-07!35;UBERON:0001041!2.61e-07!98;UBERON:0000466!2.82e-07!126;UBERON:0000974!3.85e-07!10;UBERON:0000344!4.80e-07!12;UBERON:0000915!7.87e-07!52 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.52e-10;33!UBERON:0005409;3.95e-09;22!UBERON:0005178;1.81e-08;34!UBERON:0002224;1.81e-08;34!UBERON:0005911;4.03e-08;36!UBERON:0005181;8.61e-08;35!UBERON:0001555;1.49e-07;54!UBERON:0000160;1.55e-07;17!UBERON:0002048;1.85e-07;22!UBERON:0000117;1.85e-07;22!UBERON:0000171;1.85e-07;22!UBERON:0000170;1.85e-07;22!UBERON:0004807;3.19e-07;22!UBERON:0000344;4.28e-07;20!UBERON:0000974;4.67e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004921;1.52e-10;33!UBERON:0005409;3.95e-09;22!UBERON:0005178;1.81e-08;34!UBERON:0002224;1.81e-08;34!UBERON:0005911;4.03e-08;36!UBERON:0005181;8.61e-08;35!UBERON:0001555;1.49e-07;54!UBERON:0000160;1.55e-07;17!UBERON:0002048;1.85e-07;22!UBERON:0000117;1.85e-07;22!UBERON:0000171;1.85e-07;22!UBERON:0000170;1.85e-07;22!UBERON:0004807;3.19e-07;22!UBERON:0000344;4.28e-07;20!UBERON:0000974;4.67e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.50e-26,160;UBERON:0000925,2.50e-26,160;UBERON:0006595,2.50e-26,160;UBERON:0001007,9.76e-21,145;UBERON:0001555,9.76e-21,145;UBERON:0007026,9.76e-21,145;UBERON:0004921,5.66e-18,118;UBERON:0005911,4.23e-14,82;UBERON:0001004,1.24e-12,74;UBERON:0005153,9.01e-11,37;UBERON:0000065,1.98e-10,54;UBERON:0005178,1.16e-09,34;UBERON:0002224,1.16e-09,34;UBERON:0001041,1.36e-09,87;UBERON:0005181,3.33e-09,35;UBERON:0005157,1.16e-08,47;UBERON:0000161,1.61e-08,36;UBERON:0000915,4.45e-08,52;UBERON:0005409,1.68e-07,25;UBERON:0000160,1.72e-07,17;UBERON:0000974,1.79e-07,10;UBERON:0002048,1.89e-07,22;UBERON:0000117,1.89e-07,22;UBERON:0000171,1.89e-07,22;UBERON:0000170,1.89e-07,22;UBERON:0005597,1.89e-07,22;UBERON:0000118,1.89e-07,22;UBERON:0004807,2.99e-07,28;UBERON:0000344,3.96e-07,20;UBERON:0004175,9.72e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.68600904752263,13.9560233594486,1.74753097704138,3.69273769519835,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0.393364276848904,0,0.619264493264304,14.7107395916628,14.1566781825778,5.54631015250181,0,0,0,1.10799081706375,0.802177789880567,1.08505435357926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,14.3598132183098,10.6112905942274,7.19605246498282,0,8.79990119910694,5.6813736688168,9.74133642039557,0,0.883817722424512,1.32920336750173,0.812411591295047,0,0.130059347559878,0,0,0,3.26230438956533,3.21048993707656,5.22677619024884,0,2.29932296161153,2.74901956386104,1.51811815211702,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0,0.821127996921047,5.24177532384304,3.20928234940209,9.41358625238193,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0.175669571386252,1.24430121722827,5.10013403609559,7.41568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97750483428055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05847791642923,5.45492241181669,5.73609190778008,0.243947412259191,0.397589304964456,0.348581828608555,0.725627385107593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0,0,0,20.2930923596137,0,1.31700342490351,5.62008766288098,9.85183929633982,3.88871469665824,0,0,0,0,0.117408694235822,0,0,0,19.7551099489819,14.5942647556128,0,0,0,0,1.51183915378974,3.40260233381728,6.26909658919938,6.68458058582112,2.30029607499127,0,0,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,2.36436912242313,2.37190332345469,3.20857590699371,0,0,0,0,0,0,0,0.414415513436035,0.736148950314839,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0,0,0,1.03384013061444,2.80428461064202,2.56146138728266,3.63753085735511,0,2.11673205330776,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,14.382274501403,9.62431057455767,13.8121483403844,0,0,0,0.451199612907412,0.539107359730903,0,0,0,0,0,0,0,0,0,1.01950509218015,6.64860807142979,0.447749509444357,0,0,0,0,0,1.64865618636356,0,0.082509499920588,0.574265537996172,4.55042172225565,0,0.096670718292122,0,0,0,0,0,0,0,9.25595526021477,11.7235941092715,9.06050258711547,18.208400553999,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,6.63932577806033,3.35151137767894,8.71127878890581,2.35359501941948,9.47111819876706,16.8471475667626,19.9543569091504,12.1753402109689,0,0,0,0.238231775457789,0,0,0,0,0,0,16.1726542547481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6382540359261,0,0,0,0,5.49112314896687,3.26661148915902,6.45037474408387,0,0,0,0,1.47787785689595,6.17668763578316,4.42054264849836,5.79445320064835,0,0,0.311039587661807,28.2186622602606,18.9762445156146,0,10.5548444031519,0,0,0,0.556608588971108,0,20.3133653646482,19.9408799991326,2.89999830173917,28.9035358645169,20.5945456737141,16.5471377237555,0,0,0,0,0,0,0.110579259931225,0,2.19385397153973,0,25.3751214587058,4.07836370070124,0,1.38338342632836,0,3.69401064534827,2.55200927785536,1.00757352742049,1.5991043280559,0,0,0,0,0,0,0,0,0,10.7733653385037,16.679662429205,0,21.8957624837271,23.2643394643782,58.0478637686944,0,0,0,0.067401132980677,0.802577647298789,0,0,7.43525551941941,0,6.31335044559025,39.9269362960591,0,2.52746318513952,0,0,0,0,0,0,1.99226682220855,0,1.90915712168644,47.3303279511444,39.6119389940832,3.31980669659857,20.2943518316508,0,0,0,9.9898686983072,0,2.25980740780532,0,0,0.189932387867636,14.861905087845,6.57302326062576,35.6466501214719,0,26.8008175906637,0.114536596165916,0,0,0,33.7042469502017,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,21.76501105439,0,0,0,0,0,0,0,0,0,0,0,0,1.12527203925513,1.10031549277787,1.24632101408756,0.2249738915515,8.51182150013745,0.182248669974074,2.0126081255956,2.75819975547194,2.09818352539992,0,0,45.8677321593474,0,0,0,0,0,0,0,0,0,0,4.10346254298631,5.30027555648885,0,0.13223260174269,0.171086837884329,5.63852017853338,6.30045734149399,5.65935498358797,14.0841278818046,0.496166021811951,0,0,8.93677760878255,0,0,0,0,2.35581144375351,0,0,0,0,1.33114861844223,0.558867626472451,0,0,0,0,0,0,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9081306271527,0,0,0,0,0,7.83325243228889,10.5753134205605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0.645902582527404,0,6.87034029507179,27.1330363699803,10.4554301157357,16.6356959256487,0,0,0,0.376051641746286,0,23.4454203369928,0,0,54.4110397278727,0,0,0,0.0634158101939068,0,11.5134131040008,3.96968942711435,0,32.7071814757364,0.535701835878287,0,14.5671745016792,8.42350107999801,1.68534503309014,0,0,0.135939465953663,0.0657727735628491,0.236387681767936,50.7215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| ||
|short_description=p2@TMEM30B | |short_description=p2@TMEM30B | ||
}} | }} |
Revision as of 13:32, 17 November 2012
Short description: | p2@TMEM30B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TMEM30B_5end |
Coexpression cluster: | C1727_colon_small_stomach_papillotubular_breast_duodenum_prostate |
Association with transcript: | 0bp_to_ENST00000355702_5end |
EntrezGene: | TMEM30B |
HGNC: | 27254 |
UniProt: | Q3MIR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.64e-20 | 42 |
epithelial cell | 8.13e-14 | 253 |
endodermal cell | 1.91e-13 | 58 |
respiratory epithelial cell | 1.26e-10 | 13 |
epithelial cell of alimentary canal | 9.55e-09 | 20 |
epithelial cell of tracheobronchial tree | 5.38e-07 | 9 |
epithelial cell of lower respiratory tract | 5.38e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.50e-26 | 160 |
endoderm | 2.50e-26 | 160 |
presumptive endoderm | 2.50e-26 | 160 |
digestive system | 9.76e-21 | 145 |
digestive tract | 9.76e-21 | 145 |
primitive gut | 9.76e-21 | 145 |
subdivision of digestive tract | 5.66e-18 | 118 |
endo-epithelium | 4.23e-14 | 82 |
respiratory system | 1.24e-12 | 74 |
epithelial bud | 9.01e-11 | 37 |
respiratory tract | 1.98e-10 | 54 |
thoracic cavity element | 1.16e-09 | 34 |
thoracic cavity | 1.16e-09 | 34 |
foregut | 1.36e-09 | 87 |
thoracic segment organ | 3.33e-09 | 35 |
epithelial fold | 1.16e-08 | 47 |
orifice | 1.61e-08 | 36 |
thoracic segment of trunk | 4.45e-08 | 52 |
gastrointestinal system | 1.68e-07 | 25 |
intestine | 1.72e-07 | 17 |
neck | 1.79e-07 | 10 |
lung | 1.89e-07 | 22 |
respiratory tube | 1.89e-07 | 22 |
respiration organ | 1.89e-07 | 22 |
pair of lungs | 1.89e-07 | 22 |
lung primordium | 1.89e-07 | 22 |
lung bud | 1.89e-07 | 22 |
respiratory system epithelium | 2.99e-07 | 28 |
mucosa | 3.96e-07 | 20 |
internal genitalia | 9.72e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.82e-13 | 14 |
carcinoma | 1.39e-12 | 106 |
adenocarcinoma | 3.65e-09 | 25 |
cell type cancer | 9.87e-08 | 143 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.