FFCP PHASE1:Hg19::chr5:133482429..133482440,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000084!1.16e-14!25;CL:0000827!1.16e-14!25;CL:0000791!1.21e-12!18;CL:0000789!1.21e-12!18;CL:0002420!1.21e-12!18;CL:0002419!1.21e-12!18;CL:0000790!1.21e-12!18;CL:0000542!1.48e-11!53;CL:0000051!1.48e-11!53;CL:0000838!8.64e-11!52;CL:0000624!7.07e-10!6 | |ontology_enrichment_celltype=CL:0000084!1.16e-14!25;CL:0000827!1.16e-14!25;CL:0000791!1.21e-12!18;CL:0000789!1.21e-12!18;CL:0002420!1.21e-12!18;CL:0002419!1.21e-12!18;CL:0000790!1.21e-12!18;CL:0000542!1.48e-11!53;CL:0000051!1.48e-11!53;CL:0000838!8.64e-11!52;CL:0000624!7.07e-10!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.85e-16;25!CL:0000135;2.38e-12;3!CL:0000226;2.38e-12;3!CL:0000842;2.38e-12;3!CL:0000388;2.38e-12;3!CL:0000791;5.22e-12;18!CL:0000789;5.22e-12;18!CL:0002419;5.22e-12;18!CL:0000625;1.53e-07;11!CL:0000624;6.18e-07;6 | |ontology_enrichment_celltype_v019=CL:0000084;1.85e-16;25!CL:0000135;2.38e-12;3!CL:0000226;2.38e-12;3!CL:0000842;2.38e-12;3!CL:0000388;2.38e-12;3!CL:0000791;5.22e-12;18!CL:0000789;5.22e-12;18!CL:0002419;5.22e-12;18!CL:0000625;1.53e-07;11!CL:0000624;6.18e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.16e-16,25;CL:0000827,2.16e-16,25;CL:0000135,2.12e-12,3;CL:0000388,2.12e-12,3;CL:0000226,2.25e-12,3;CL:0000842,2.25e-12,3;CL:0000791,5.81e-12,18;CL:0000789,5.81e-12,18;CL:0002420,5.81e-12,18;CL:0002419,5.81e-12,18;CL:0000790,5.81e-12,18;CL:0000838,1.71e-07,52;CL:0000625,1.72e-07,11;CL:0000542,2.45e-07,53;CL:0000051,2.45e-07,53;CL:0000624,6.09e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;5.22e-12;18 | |ontology_enrichment_development_v019=CL:0000790;5.22e-12;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.32e-18;2!UBERON:0005058;2.32e-18;2!UBERON:0009113;2.32e-18;2!UBERON:0000178;2.91e-14;15!UBERON:0000179;2.91e-14;15!UBERON:0000463;2.91e-14;15!UBERON:0007846;2.38e-12;3!UBERON:0000043;2.38e-12;3!UBERON:0007845;2.38e-12;3!UBERON:0002390;1.23e-11;32!UBERON:0004177;6.88e-08;5!UBERON:0005057;6.88e-08;5!UBERON:0002193;1.81e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0002370;2.32e-18;2!UBERON:0005058;2.32e-18;2!UBERON:0009113;2.32e-18;2!UBERON:0000178;2.91e-14;15!UBERON:0000179;2.91e-14;15!UBERON:0000463;2.91e-14;15!UBERON:0007846;2.38e-12;3!UBERON:0000043;2.38e-12;3!UBERON:0007845;2.38e-12;3!UBERON:0002390;1.23e-11;32!UBERON:0004177;6.88e-08;5!UBERON:0005057;6.88e-08;5!UBERON:0002193;1.81e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.57e-14,15;UBERON:0000179,2.57e-14,15;UBERON:0000463,2.57e-14,15;UBERON:0007846,2.12e-12,3;UBERON:0000043,2.12e-12,3;UBERON:0007845,2.12e-12,3;UBERON:0002370,1.28e-09,4;UBERON:0005058,1.28e-09,4;UBERON:0009113,1.28e-09,4;UBERON:0003295,1.28e-09,4;UBERON:0005562,1.28e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.840547463227464,0.492603536699674,0.708397031823113,0,0,0,0,0,0,0,0.142169232487422,0,0,0.802177789880567,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,7.07419372948497,3.08402248499264,0,0.651844533267181,0.473447805734733,0,0,0.589211814949674,0.443067789167242,0.270803863765016,0.25618263945135,0.130059347559878,0.493313713811028,0.829050053357545,0.869409257205157,2.66915813691709,0.802622484269139,6.27213142829861,0.113309342697566,0.766440987203842,0.34362744548263,2.78321661221453,0.318565414324097,0,0,1.05402583354441,0.639933055772092,0,0.473554504088034,0,1.00803371612366,1.60464117470104,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.448346041655403,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0.194874010322397,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06340959063441,0,0,0,0,0.100528972411631,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.898401253958239,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,1.50999940573032,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0.246381468041427,1.03850885836724,0.581051892299796,0,0.200506470303285,0.0920809889358963,0,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,5.69647187174163,0.476463550915578,0,1.29694662238543,0,1.58625035258854,0,0,0,0.371606350251437,0,2.41882267384608,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10966490978682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.551482276150566,0.0824158583811665,0.471824806979294,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0.298509605773748,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0.111855431797792,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0.462175628631418,1.29787968637137,0.126166424835079,0.109265571963696,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0.476128862927481,2.97108985245628,1.05527014302958,0,0,0.202117188958219,0,0,0.134704106029175,0,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,1.61019034872821,0 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| ||
|short_description=p@chr5:133482429..133482440,+ | |short_description=p@chr5:133482429..133482440,+ | ||
}} | }} |
Revision as of 22:28, 18 November 2012
Short description: | p@chr5:133482429..133482440, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:133482429..133482440, + |
Coexpression cluster: | C1525_Hodgkin_chronic_CD4_thymus_Whole_blood_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.16e-16 | 25 |
pro-T cell | 2.16e-16 | 25 |
fibrocyte | 2.12e-12 | 3 |
tendon cell | 2.12e-12 | 3 |
single nucleate cell | 2.25e-12 | 3 |
mononuclear cell | 2.25e-12 | 3 |
mature alpha-beta T cell | 5.81e-12 | 18 |
alpha-beta T cell | 5.81e-12 | 18 |
immature T cell | 5.81e-12 | 18 |
mature T cell | 5.81e-12 | 18 |
immature alpha-beta T cell | 5.81e-12 | 18 |
lymphoid lineage restricted progenitor cell | 1.71e-07 | 52 |
CD8-positive, alpha-beta T cell | 1.72e-07 | 11 |
lymphocyte | 2.45e-07 | 53 |
common lymphoid progenitor | 2.45e-07 | 53 |
CD4-positive, alpha-beta T cell | 6.09e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 2.57e-14 | 15 |
haemolymphatic fluid | 2.57e-14 | 15 |
organism substance | 2.57e-14 | 15 |
dense regular connective tissue | 2.12e-12 | 3 |
tendon | 2.12e-12 | 3 |
regular connective tissue | 2.12e-12 | 3 |
thymus | 1.28e-09 | 4 |
hemolymphoid system gland | 1.28e-09 | 4 |
thymic region | 1.28e-09 | 4 |
pharyngeal gland | 1.28e-09 | 4 |
thymus primordium | 1.28e-09 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.