FFCP PHASE1:Hg19::chr14:55168823..55168837,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.64e-19;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.64e-19;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.41e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.79e-10;11!UBERON:0006215;1.74e-09;3!UBERON:0009497;1.42e-08;13 | |ontology_enrichment_development_v019=UBERON:0004161;5.79e-10;11!UBERON:0006215;1.74e-09;3!UBERON:0009497;1.42e-08;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002680!2.05e-09!9;UBERON:0001895!2.05e-09!9;UBERON:0010092!2.05e-09!9;UBERON:0003076!3.15e-09!15;UBERON:0003057!3.15e-09!15;UBERON:0007023!3.88e-09!115;UBERON:0004733!4.88e-09!12;UBERON:0002028!4.88e-09!12;UBERON:0007277!4.88e-09!12;UBERON:0004732!2.95e-08!13;UBERON:0000988!4.82e-08!3 | |ontology_enrichment_uberon=UBERON:0002680!2.05e-09!9;UBERON:0001895!2.05e-09!9;UBERON:0010092!2.05e-09!9;UBERON:0003076!3.15e-09!15;UBERON:0003057!3.15e-09!15;UBERON:0007023!3.88e-09!115;UBERON:0004733!4.88e-09!12;UBERON:0002028!4.88e-09!12;UBERON:0007277!4.88e-09!12;UBERON:0004732!2.95e-08!13;UBERON:0000988!4.82e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.09e-32;19!UBERON:0006925;1.09e-32;19!UBERON:0002423;5.93e-25;25!UBERON:0002365;3.83e-20;31!UBERON:0002330;3.83e-20;31!UBERON:0002368;1.97e-17;33!UBERON:0000949;1.17e-12;43!UBERON:0005172;3.70e-09;52!UBERON:0005173;3.70e-09;52!UBERON:0002417;3.91e-07;58!UBERON:0000916;3.91e-07;58 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.09e-32;19!UBERON:0006925;1.09e-32;19!UBERON:0002423;5.93e-25;25!UBERON:0002365;3.83e-20;31!UBERON:0002330;3.83e-20;31!UBERON:0002368;1.97e-17;33!UBERON:0000949;1.17e-12;43!UBERON:0005172;3.70e-09;52!UBERON:0005173;3.70e-09;52!UBERON:0002417;3.91e-07;58!UBERON:0000916;3.91e-07;58 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.83e-33,19;UBERON:0006925,9.83e-33,19;UBERON:0008836,9.83e-33,19;UBERON:0008835,2.47e-28,22;UBERON:0003894,2.47e-28,22;UBERON:0009854,4.03e-27,23;UBERON:0007499,5.50e-25,25;UBERON:0009497,5.50e-25,25;UBERON:0000015,5.50e-25,25;UBERON:0002423,5.50e-25,25;UBERON:0006235,5.50e-25,25;UBERON:0004161,5.50e-25,25;UBERON:0009856,4.84e-24,26;UBERON:0002365,3.16e-20,31;UBERON:0002330,3.16e-20,31;UBERON:0002368,5.89e-18,35;UBERON:0000949,4.89e-14,45;UBERON:0003929,9.64e-12,54;UBERON:0005172,9.64e-12,54;UBERON:0005173,9.64e-12,54;UBERON:0002530,9.10e-11,59;UBERON:0002417,1.36e-10,60;UBERON:0000916,1.36e-10,60;UBERON:0005911,8.43e-08,82;UBERON:0001041,2.32e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,1.96565443335525,4.72631925345123,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22468147755661,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,4.61304623806218,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0.295547618953547,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0.13480708770837,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,3.81035807563014,3.97520666736664,0.387848869084652,0.26446520348538,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.227336094654718,0.803892390468535,0.829169439458779,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,1.96565443335525,4.72631925345123,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22468147755661,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,4.61304623806218,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0.295547618953547,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0.13480708770837,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,3.81035807563014,3.97520666736664,0.387848869084652,0.26446520348538,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0.192914038270915,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.227336094654718,0.803892390468535,0.829169439458779,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p30@SAMD4A | |short_description=p30@SAMD4A | ||
}} | }} |
Revision as of 09:25, 19 November 2012
Short description: | p30@SAMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_30_at_SAMD4A_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -110bp_to_AB028976_5end |
EntrezGene: | SAMD4A |
HGNC: | 23023 |
UniProt: | Q9UPU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.41e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 9.83e-33 | 19 |
digestive gland | 9.83e-33 | 19 |
liver bud | 9.83e-33 | 19 |
hepatic diverticulum | 2.47e-28 | 22 |
liver primordium | 2.47e-28 | 22 |
digestive tract diverticulum | 4.03e-27 | 23 |
epithelial sac | 5.50e-25 | 25 |
epithelium of foregut-midgut junction | 5.50e-25 | 25 |
anatomical boundary | 5.50e-25 | 25 |
hepatobiliary system | 5.50e-25 | 25 |
foregut-midgut junction | 5.50e-25 | 25 |
septum transversum | 5.50e-25 | 25 |
sac | 4.84e-24 | 26 |
exocrine gland | 3.16e-20 | 31 |
exocrine system | 3.16e-20 | 31 |
endocrine gland | 5.89e-18 | 35 |
endocrine system | 4.89e-14 | 45 |
gut epithelium | 9.64e-12 | 54 |
abdomen element | 9.64e-12 | 54 |
abdominal segment element | 9.64e-12 | 54 |
gland | 9.10e-11 | 59 |
abdominal segment of trunk | 1.36e-10 | 60 |
abdomen | 1.36e-10 | 60 |
endo-epithelium | 8.43e-08 | 82 |
foregut | 2.32e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.