FFCP PHASE1:Hg19::chr12:6745254..6745265,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0002274!2.04e-11!5;CL:0000457!2.04e-11!5;CL:0002191!2.04e-11!5;CL:0000097!2.04e-11!5;CL:0000831!2.04e-11!5;CL:0002028!2.04e-11!5;CL:0000763!4.39e-07!112;CL:0000049!4.39e-07!112 | |ontology_enrichment_celltype=CL:0002274!2.04e-11!5;CL:0000457!2.04e-11!5;CL:0002191!2.04e-11!5;CL:0000097!2.04e-11!5;CL:0000831!2.04e-11!5;CL:0002028!2.04e-11!5;CL:0000763!4.39e-07!112;CL:0000049!4.39e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0001014;6.85e-14;2!CL:0001016;6.85e-14;2 | |ontology_enrichment_celltype_v019=CL:0001014;6.85e-14;2!CL:0001016;6.85e-14;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.30e-14,2;CL:0001016,7.30e-14,2;CL:0000763,2.73e-08,108;CL:0000049,2.73e-08,108 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.47e-09;3!UBERON:0003057;1.47e-09;3 | |ontology_enrichment_development_v019=UBERON:0006241;1.47e-09;3!UBERON:0003057;1.47e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;2.49e-13;8!DOID:8692;9.78e-08;31 | |ontology_enrichment_disease_v019=DOID:1036;2.49e-13;8!DOID:8692;9.78e-08;31 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,2.49e-13,8;DOID:8692,6.85e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.45e-33!115;UBERON:0001049!7.59e-20!57;UBERON:0005068!7.59e-20!57;UBERON:0006241!7.59e-20!57;UBERON:0007135!7.59e-20!57;UBERON:0001893!5.09e-18!34;UBERON:0002780!9.36e-18!41;UBERON:0001890!9.36e-18!41;UBERON:0006240!9.36e-18!41;UBERON:0002020!1.76e-17!34;UBERON:0003528!1.76e-17!34;UBERON:0003080!3.40e-17!42;UBERON:0002616!3.61e-17!59;UBERON:0002791!1.17e-16!33;UBERON:0003075!2.40e-16!86;UBERON:0007284!2.40e-16!86;UBERON:0001869!2.58e-15!32;UBERON:0002346!3.19e-15!90;UBERON:0005743!9.08e-15!86;UBERON:0001017!9.51e-15!82;UBERON:0000955!1.52e-14!69;UBERON:0006238!1.52e-14!69;UBERON:0000073!1.37e-12!94;UBERON:0001016!1.37e-12!94;UBERON:0002619!6.15e-12!22;UBERON:0001950!2.98e-11!20;UBERON:0003056!3.70e-11!61;UBERON:0000153!1.43e-10!129;UBERON:0007811!1.43e-10!129;UBERON:0000956!3.43e-10!25;UBERON:0000203!3.43e-10!25;UBERON:0002308!1.06e-09!9;UBERON:0000125!1.06e-09!9;UBERON:0000033!3.45e-09!123;UBERON:0004121!9.55e-09!169;UBERON:0000200!2.39e-08!6;UBERON:0000924!2.52e-08!173;UBERON:0006601!2.52e-08!173;UBERON:0002298!3.79e-08!8;UBERON:0002420!1.20e-07!9;UBERON:0007245!1.20e-07!9;UBERON:0010009!1.20e-07!9;UBERON:0010011!1.20e-07!9;UBERON:0000454!1.20e-07!9;UBERON:0002771!4.85e-07!3;UBERON:0009663!5.43e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!2.45e-33!115;UBERON:0001049!7.59e-20!57;UBERON:0005068!7.59e-20!57;UBERON:0006241!7.59e-20!57;UBERON:0007135!7.59e-20!57;UBERON:0001893!5.09e-18!34;UBERON:0002780!9.36e-18!41;UBERON:0001890!9.36e-18!41;UBERON:0006240!9.36e-18!41;UBERON:0002020!1.76e-17!34;UBERON:0003528!1.76e-17!34;UBERON:0003080!3.40e-17!42;UBERON:0002616!3.61e-17!59;UBERON:0002791!1.17e-16!33;UBERON:0003075!2.40e-16!86;UBERON:0007284!2.40e-16!86;UBERON:0001869!2.58e-15!32;UBERON:0002346!3.19e-15!90;UBERON:0005743!9.08e-15!86;UBERON:0001017!9.51e-15!82;UBERON:0000955!1.52e-14!69;UBERON:0006238!1.52e-14!69;UBERON:0000073!1.37e-12!94;UBERON:0001016!1.37e-12!94;UBERON:0002619!6.15e-12!22;UBERON:0001950!2.98e-11!20;UBERON:0003056!3.70e-11!61;UBERON:0000153!1.43e-10!129;UBERON:0007811!1.43e-10!129;UBERON:0000956!3.43e-10!25;UBERON:0000203!3.43e-10!25;UBERON:0002308!1.06e-09!9;UBERON:0000125!1.06e-09!9;UBERON:0000033!3.45e-09!123;UBERON:0004121!9.55e-09!169;UBERON:0000200!2.39e-08!6;UBERON:0000924!2.52e-08!173;UBERON:0006601!2.52e-08!173;UBERON:0002298!3.79e-08!8;UBERON:0002420!1.20e-07!9;UBERON:0007245!1.20e-07!9;UBERON:0010009!1.20e-07!9;UBERON:0010011!1.20e-07!9;UBERON:0000454!1.20e-07!9;UBERON:0002771!4.85e-07!3;UBERON:0009663!5.43e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002336;6.72e-26;1!UBERON:0011215;6.72e-26;1!UBERON:0001018;6.72e-26;1!UBERON:0002473;6.72e-26;1!UBERON:0005340;6.72e-26;1!UBERON:0003544;6.72e-26;1!UBERON:0005970;6.72e-26;1!UBERON:0002316;6.72e-26;1!UBERON:0001020;6.72e-26;1!UBERON:0002437;6.72e-26;1!UBERON:0005162;1.14e-13;2!UBERON:0000122;1.14e-13;2!UBERON:0002240;1.47e-09;3!UBERON:0005174;1.47e-09;3!UBERON:0001137;1.47e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0002336;6.72e-26;1!UBERON:0011215;6.72e-26;1!UBERON:0001018;6.72e-26;1!UBERON:0002473;6.72e-26;1!UBERON:0005340;6.72e-26;1!UBERON:0003544;6.72e-26;1!UBERON:0005970;6.72e-26;1!UBERON:0002316;6.72e-26;1!UBERON:0001020;6.72e-26;1!UBERON:0002437;6.72e-26;1!UBERON:0005162;1.14e-13;2!UBERON:0000122;1.14e-13;2!UBERON:0002240;1.47e-09;3!UBERON:0005174;1.47e-09;3!UBERON:0001137;1.47e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,1.26e-25,1;UBERON:0011215,1.26e-25,1;UBERON:0001018,1.26e-25,1;UBERON:0002473,1.26e-25,1;UBERON:0005340,1.26e-25,1;UBERON:0003544,1.26e-25,1;UBERON:0005970,1.26e-25,1;UBERON:0002316,1.26e-25,1;UBERON:0001020,1.26e-25,1;UBERON:0002437,1.26e-25,1;UBERON:0005162,1.55e-13,2;UBERON:0000122,1.55e-13,2;UBERON:0002240,1.19e-09,3;UBERON:0005174,1.19e-09,3;UBERON:0001137,1.19e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0.290796477559129,0.377875943688809,1.4555043671269,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.704387472105808,0.829312462163088,0.144119953416961,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0.219259876645935,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,0,0,0.66614393599564,0,0,0,0,0,0,0.23874448473769,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,1.41282230755522,0.498635045700469,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,1.07841812769083,0,0.468528891450678,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,2.32140586367385,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72394293573612,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.203909198930495,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,1.78227840196252,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.413731983447581,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0,0,0.435433495793923,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0.290796477559129,0.377875943688809,1.4555043671269,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.704387472105808,0.829312462163088,0.144119953416961,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0.219259876645935,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,0,0,0.66614393599564,0,0,0,0,0,0,0.23874448473769,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,1.41282230755522,0.498635045700469,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,1.07841812769083,0,0.468528891450678,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,2.32140586367385,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72394293573612,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.221858103073705,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.203909198930495,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,1.78227840196252,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.413731983447581,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0,0,0.435433495793923,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@LPAR5 | |short_description=p8@LPAR5 | ||
}} | }} |
Revision as of 15:09, 20 November 2012
Short description: | p8@LPAR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_LPAR5_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_NM_020400, uc001qps.2_5end |
EntrezGene: | LPAR5 |
HGNC: | 13307 |
UniProt: | Q5KU18Q9H1C0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.30e-14 | 2 |
immature CD1a-positive Langerhans cell | 7.30e-14 | 2 |
myeloid cell | 2.73e-08 | 108 |
common myeloid progenitor | 2.73e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 1.26e-25 | 1 |
central nervous system cell part cluster | 1.26e-25 | 1 |
axon tract | 1.26e-25 | 1 |
intercerebral commissure | 1.26e-25 | 1 |
dorsal telencephalic commissure | 1.26e-25 | 1 |
brain white matter | 1.26e-25 | 1 |
brain commissure | 1.26e-25 | 1 |
white matter | 1.26e-25 | 1 |
nervous system commissure | 1.26e-25 | 1 |
cerebral hemisphere white matter | 1.26e-25 | 1 |
multi cell component structure | 1.55e-13 | 2 |
neuron projection bundle | 1.55e-13 | 2 |
spinal cord | 1.19e-09 | 3 |
dorsal region element | 1.19e-09 | 3 |
dorsum | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.49e-13 | 8 |
myeloid leukemia | 6.85e-08 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.