FFCP PHASE1:Hg19::chr15:39877742..39877767,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002371!1.21e-19!591;CL:0000055!6.25e-19!180;CL:0000057!8.33e-18!75;CL:0000144!5.53e-16!625;CL:0000548!9.95e-14!679;CL:0000004!9.95e-14!679;CL:0000255!9.95e-14!679;CL:0000012!2.77e-13!682;CL:0002139!9.33e-13!24;CL:0000222!6.69e-11!119;CL:0000115!7.53e-11!35;CL:0002620!1.90e-10!23;CL:0000220!8.46e-10!246;CL:0000071!1.68e-09!18;CL:0002546!1.68e-09!18;CL:0002321!1.81e-09!248;CL:0002078!3.24e-09!44;CL:0000003!6.61e-08!722;CL:0002334!8.32e-08!12;CL:0000063!4.27e-07!578 | |ontology_enrichment_celltype=CL:0002371!1.21e-19!591;CL:0000055!6.25e-19!180;CL:0000057!8.33e-18!75;CL:0000144!5.53e-16!625;CL:0000548!9.95e-14!679;CL:0000004!9.95e-14!679;CL:0000255!9.95e-14!679;CL:0000012!2.77e-13!682;CL:0002139!9.33e-13!24;CL:0000222!6.69e-11!119;CL:0000115!7.53e-11!35;CL:0002620!1.90e-10!23;CL:0000220!8.46e-10!246;CL:0000071!1.68e-09!18;CL:0002546!1.68e-09!18;CL:0002321!1.81e-09!248;CL:0002078!3.24e-09!44;CL:0000003!6.61e-08!722;CL:0002334!8.32e-08!12;CL:0000063!4.27e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.09e-12;24!CL:0002334;5.21e-11;12!CL:0002620;4.47e-10;23!CL:0000071;1.16e-08;18!CL:0000115;1.34e-08;36!CL:0000057;9.26e-08;73!CL:0002580;7.71e-07;3 | |ontology_enrichment_celltype_v019=CL:0002139;8.09e-12;24!CL:0002334;5.21e-11;12!CL:0002620;4.47e-10;23!CL:0000071;1.16e-08;18!CL:0000115;1.34e-08;36!CL:0000057;9.26e-08;73!CL:0002580;7.71e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.98e-22,76;CL:0002139,6.54e-12,24;CL:0002334,4.00e-11,12;CL:0000115,3.28e-10,36;CL:0002620,3.50e-10,23;CL:0000071,9.81e-09,18;CL:0002546,9.81e-09,18;CL:0002078,3.03e-07,45;CL:0002580,7.23e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.16e-08;18 | |ontology_enrichment_development_v019=CL:0002546;1.16e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;2.37e-09;5!DOID:450;2.37e-09;5!DOID:66;2.37e-09;5!DOID:423;2.37e-09;5!DOID:0080000;2.37e-09;5!DOID:11722;2.37e-09;5 | |ontology_enrichment_disease_v019=DOID:17;2.37e-09;5!DOID:450;2.37e-09;5!DOID:66;2.37e-09;5!DOID:423;2.37e-09;5!DOID:0080000;2.37e-09;5!DOID:11722;2.37e-09;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.94e-09,5;DOID:450,1.94e-09,5;DOID:66,1.94e-09,5;DOID:423,1.94e-09,5;DOID:0080000,1.94e-09,5;DOID:11722,1.94e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.92e-14!79;UBERON:0007798!1.92e-14!79;UBERON:0000055!1.44e-13!69;UBERON:0001981!3.70e-12!60;UBERON:0007500!3.70e-12!60;UBERON:0004537!3.70e-12!60;UBERON:0006965!3.70e-12!60;UBERON:0003102!8.07e-12!95;UBERON:0004872!8.36e-12!84;UBERON:0000468!1.61e-11!659;UBERON:0004535!4.86e-10!110;UBERON:0002199!8.15e-10!45;UBERON:0002416!8.15e-10!45;UBERON:0001637!8.73e-10!42;UBERON:0003509!8.73e-10!42;UBERON:0004572!8.73e-10!42;UBERON:0001009!9.74e-10!113;UBERON:0001986!1.68e-09!18;UBERON:0004638!1.68e-09!18;UBERON:0004852!1.68e-09!18;UBERON:0004923!1.77e-09!57;UBERON:0000486!1.07e-08!82;UBERON:0000467!1.24e-08!625;UBERON:0002097!1.61e-08!40;UBERON:0000480!1.63e-08!626;UBERON:0000490!5.10e-08!138;UBERON:0003914!7.11e-08!118;UBERON:0005631!1.43e-07!14;UBERON:0000158!1.43e-07!14;UBERON:0000487!1.97e-07!22;UBERON:0006914!2.32e-07!25;UBERON:0004573!3.44e-07!33;UBERON:0004571!3.44e-07!33;UBERON:0002100!9.23e-07!216 | |ontology_enrichment_uberon=UBERON:0002049!1.92e-14!79;UBERON:0007798!1.92e-14!79;UBERON:0000055!1.44e-13!69;UBERON:0001981!3.70e-12!60;UBERON:0007500!3.70e-12!60;UBERON:0004537!3.70e-12!60;UBERON:0006965!3.70e-12!60;UBERON:0003102!8.07e-12!95;UBERON:0004872!8.36e-12!84;UBERON:0000468!1.61e-11!659;UBERON:0004535!4.86e-10!110;UBERON:0002199!8.15e-10!45;UBERON:0002416!8.15e-10!45;UBERON:0001637!8.73e-10!42;UBERON:0003509!8.73e-10!42;UBERON:0004572!8.73e-10!42;UBERON:0001009!9.74e-10!113;UBERON:0001986!1.68e-09!18;UBERON:0004638!1.68e-09!18;UBERON:0004852!1.68e-09!18;UBERON:0004923!1.77e-09!57;UBERON:0000486!1.07e-08!82;UBERON:0000467!1.24e-08!625;UBERON:0002097!1.61e-08!40;UBERON:0000480!1.63e-08!626;UBERON:0000490!5.10e-08!138;UBERON:0003914!7.11e-08!118;UBERON:0005631!1.43e-07!14;UBERON:0000158!1.43e-07!14;UBERON:0000487!1.97e-07!22;UBERON:0006914!2.32e-07!25;UBERON:0004573!3.44e-07!33;UBERON:0004571!3.44e-07!33;UBERON:0002100!9.23e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.25e-10;6!UBERON:0002358;1.25e-10;6!UBERON:0003684;1.25e-10;6!UBERON:0001178;1.25e-10;6!UBERON:0002199;1.68e-10;46!UBERON:0002416;1.68e-10;46!UBERON:0002097;3.82e-10;41!UBERON:0004638;1.16e-08;18!UBERON:0001986;1.16e-08;18!UBERON:0004852;1.16e-08;18!UBERON:0003102;4.07e-08;50!UBERON:0004457;9.56e-07;9!UBERON:0000042;9.56e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.25e-10;6!UBERON:0002358;1.25e-10;6!UBERON:0003684;1.25e-10;6!UBERON:0001178;1.25e-10;6!UBERON:0002199;1.68e-10;46!UBERON:0002416;1.68e-10;46!UBERON:0002097;3.82e-10;41!UBERON:0004638;1.16e-08;18!UBERON:0001986;1.16e-08;18!UBERON:0004852;1.16e-08;18!UBERON:0003102;4.07e-08;50!UBERON:0004457;9.56e-07;9!UBERON:0000042;9.56e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,7.81e-15,46;UBERON:0002416,7.81e-15,46;UBERON:0002097,6.39e-13,41;UBERON:0003102,2.02e-11,99;UBERON:0003688,8.30e-11,6;UBERON:0002358,8.30e-11,6;UBERON:0003684,8.30e-11,6;UBERON:0001178,8.30e-11,6;UBERON:0000055,1.67e-09,68;UBERON:0004923,6.97e-09,66;UBERON:0004638,9.81e-09,18;UBERON:0001986,9.81e-09,18;UBERON:0004852,9.81e-09,18;UBERON:0007500,7.58e-08,59;UBERON:0001981,7.58e-08,59;UBERON:0004537,7.58e-08,59;UBERON:0006965,7.58e-08,59;UBERON:0004872,8.39e-08,83;UBERON:0002049,2.00e-07,78;UBERON:0007798,2.00e-07,78 | |||
|phase1_expression=9.81063248061006,8.34992043174834,2.67813367782345,6.00439790118782,1.78784437770915,6.10636966870258,2.53299878168311,0,0.261185628199839,0.245733936501509,0.697801167972428,1.96597234917155,1.84636884759917,0,0,0.672325146451775,0.602694528023977,2.19093027116212,0.487932798790507,0.123121058076788,0,0.626909442956176,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0.309632246632152,0.919421224478927,0.30120591877825,0,0,0,0,0.553995408531877,0.601633342410425,0,0,0,0,0.581592955118259,0,0,2.09186133215116,0,0,0.863077176966451,0,0,0,0,0,1.12945403725563,0,0,0.612167784741805,0,0,0.659702600373432,0,0,1.45104619314292,0,0,1.50749199154046,0,0,1.21079900526674,0,0,0,0,0,0.112328631146495,0.600707571366025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91793842765295,0.361439152384566,4.01070328508712,0.579386075843295,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0.860234595106124,1.73570250803797,0,0.419499436209906,1.92582629358047,0.835979866147242,0.258416759169329,1.42306505074684,0.66944122552934,2.01414658554573,3.80136052859256,2.19655851793353,4.04429388380456,7.29127753093584,1.25019619597712,0.44905874525234,0.225222960966644,1.53316637465883,1.89853131913626,2.01521918323448,1.31780417436063,0,0.436094052142534,8.44852317882041,1.51956613997496,2.1185468930115,2.0078563452417,0.354668382198357,0,1.06748995729705,4.19334832309172,0,0.67355336034844,1.63461903113459,0,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0.408308342509787,0.122834317311768,1.03325781175765,3.56400857184616,5.93440630268536,0,0,0.168336113954066,0,0,0,6.74273150757843,2.40380894250555,0.680593098960126,8.61070251306537,4.69826255400848,4.66250182551036,5.40163972951924,1.64884046781502,4.89517026086695,2.97786970130544,2.02531598689519,1.46155507741798,2.27190396819703,3.49789614840738,0.969876340912871,6.39017266529906,0.906768884048762,2.7129694769678,1.54608682530637,1.09098448236334,1.14721838155602,0,0,0,0,0,0,4.69348596989448,12.2215778256648,0,3.71494342425583,2.88751792667834,0.118306800039844,0,0,0.110293972732394,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,0,1.00528972411631,0.833296006426766,0,2.07986957055916,0,0,0.234817388471643,2.7429625074604,3.24089858803628,4.37584550139576,0.790204397959275,0,0,0,0,0,1.34385702559088,0.283550194484773,1.43293636324557,0.871901815541886,2.30029607499127,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,0,0,0,0.517086863031111,0,0,2.12750493267896,5.2003718455683,0,0,0,0.714889968290738,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,2.15662369942424,1.14861935834114,0,0.434343920002738,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,1.00034104211935,1.35632511849868,5.40724239980099,4.10386674233472,3.78485796081443,4.91993942969395,0.300946099727719,0,0,1.32845119707087,0.553107505625109,1.30325421702124,0,0,0.206768026122887,0,0.106727557803444,0.909382714338778,1.66435439510497,1.81434175997808,4.71404834855676,13.6581156226376,10.6650835884568,3.71603532841533,4.09365799253363,7.39928037260594,2.96836132889982,1.69630663182921,2.13074070375753,0.246381468041427,0,0.464841513839837,0,2.40607764363942,0.276242966807689,0.34444334449382,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,0,0,2.27466768141793,0.680374821106063,1.72732732881711,3.08454505380579,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0,0,1.95018073810956,0,0,0,0.15350367472613,0.275673144969061,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.638063562472921,0.10115778085555,0,3.46293581513704,0,0,1.06461206063404,0,1.8532421910392,0,0.372158369359667,0.316379424718726,0.571890581771475,0.255897791311334,0,0.95460974377781,1.56989728039846,0.539617372749944,0.823611089208164,0.235624804691373,0.404364963146632,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.409499734223957,0.848432591722276,0,0,1.99031692572366,0.438450885253763,0,0,1.42037263873893,1.54911749049875,0.845086807596724,0,0.491245205065606,0.35667105148125,0,0.422215270595328,0.329294892959902,0.379473173765715,0,0.384888450902048,0.670302275535787,3.26672954583968,0.282431402330337,0.43050537267123,1.68471475667626,1.33029046061003,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.95497793895076,0.593929361665277,2.45728561679386,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,1.55519793830904,1.88723537409386,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0.957003479195758,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr15:39877742..39877767,- | |short_description=p@chr15:39877742..39877767,- | ||
}} | }} |
Revision as of 02:35, 21 November 2012
Short description: | p@chr15:39877742..39877767, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:39877742..39877767, - |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.98e-22 | 76 |
endothelial cell of vascular tree | 6.54e-12 | 24 |
preadipocyte | 4.00e-11 | 12 |
endothelial cell | 3.28e-10 | 36 |
skin fibroblast | 3.50e-10 | 23 |
blood vessel endothelial cell | 9.81e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.81e-09 | 18 |
meso-epithelial cell | 3.03e-07 | 45 |
preadipocyte of the breast | 7.23e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 7.81e-15 | 46 |
integumental system | 7.81e-15 | 46 |
skin of body | 6.39e-13 | 41 |
surface structure | 2.02e-11 | 99 |
omentum | 8.30e-11 | 6 |
peritoneum | 8.30e-11 | 6 |
abdominal cavity | 8.30e-11 | 6 |
visceral peritoneum | 8.30e-11 | 6 |
vessel | 1.67e-09 | 68 |
organ component layer | 6.97e-09 | 66 |
blood vessel endothelium | 9.81e-09 | 18 |
endothelium | 9.81e-09 | 18 |
cardiovascular system endothelium | 9.81e-09 | 18 |
epithelial tube open at both ends | 7.58e-08 | 59 |
blood vessel | 7.58e-08 | 59 |
blood vasculature | 7.58e-08 | 59 |
vascular cord | 7.58e-08 | 59 |
splanchnic layer of lateral plate mesoderm | 8.39e-08 | 83 |
vasculature | 2.00e-07 | 78 |
vascular system | 2.00e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.94e-09 | 5 |
myotonic disease | 1.94e-09 | 5 |
muscle tissue disease | 1.94e-09 | 5 |
myopathy | 1.94e-09 | 5 |
muscular disease | 1.94e-09 | 5 |
myotonic dystrophy | 1.94e-09 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.