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MacroAPE 1083:CNhs11185 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;801.6986609744673;416.0694217230095;209.45914964431006;478.77698634427105!2;611.8550681345185;385.5664084608744;301.14470363697524;607.43803...")
 
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H7;0.483362!11681-122H7;0.260399!11216-116B1;0.625756!12179-129A1;0.0756938!12180-129A2;0.242576!12181-129A3;0.389876!12176-128I7;0.231316!12177-128I8;0.126503!12182-129A4;0.150728!12183-129A5;0.235337!12184-129A6;0.16932!10809-111A8;0.166217!10597-108E3;0.00368815!10717-109I6;0.103323!10455-106G5;0.00157629!10534-107G3;0.000117025!10429-106D6;4.39796e-05!10464-106H5;0.0119964!10827-111C8;0.00181217!10789-110H6;0.000580481!10828-111C9;3.80185e-05!10788-110H5;1.2085e-06!10792-110H9;0.000133132!10765-110E9;0.000149921!10829-111D1;0.000214139!10830-111D2;3.04241e-05!10831-111D3;9.39906e-05!10832-111D4;1.77584e-06!10833-111D5;1.63391e-05!10764-110E8;6.96559e-05!10770-110F5;0.00324717!10399-106A3;0.000459571!10400-106A4;0.000118557!10405-106A9;0.0003467!10834-111D6;0.000296764!10835-111D7;5.6712e-05!10836-111D8;0.000163172!10837-111D9;8.02868e-08!10699-109G6;3.22303e-05!10802-111A1;0.00629389!10796-110I4;0.00319527!10010-101C1;0.020695!10810-111A9;0.000392631!10421-106C7;0.000389879!10708-109H6;0.000980854!12235-129G3;0.00367823!12236-129G4;0.495514!12237-129G5;0.0507598!10167-103B5;0.327642!10151-102I7;0.000115863!10428-106D5;1.18515e-05!10795-110I3;0.510261!10805-111A4;3.84317e-05!10052-101G7;0.0601858!10189-103D9;2.62721e-06!10589-108D4;0.00239721!10425-106D2;0.220705!10427-106D4;0.713867!10702-109G9;5.75939e-05!10432-106D9;0.0292982!10496-107C1;0.000164934!10718-109I7;0.00363705!10011-101C2;0.000844067!10053-101G8;3.2892e-05!10686-109F2;0.00523725!10084-102B3;0.86912!10012-101C3;1.62277e-05!10085-102B4;3.10997e-05!10482-107A5;0.00114482!10419-106C5;0.0236898!10080-102A8;0.0112239!10760-110E4;0.000914859!10709-109H7;4.75819e-05!10710-109H8;0.008336!10703-109H1;0.00424323!10719-109I8;0.351804!10642-109A3;0.482711!10177-103C6;0.451868!10164-103B2;2.90292e-05!10173-103C2;2.50107e-05!10166-103B4;0.000964911!10083-102B2;0.000589862!10188-103D8;0.00062938!10552-107I3;2.1295e-05!10553-107I4;0.00456598!10013-101C4;0.00763763!10536-107G5;0.000342048!10618-108G6;0.122587!10423-106C9;0.0217228!10785-110H2;0.000268981!12238-129G6;9.96663e-05!12239-129G7;0.0683071!12240-129G8;0.231474!10416-106C2;0.0827622!10801-110I9;5.06979e-05!10766-110F1;0.000198162!10824-111C5;3.13809e-05!10825-111C6;0.000333716!10826-111C7;0.000422378!10454-106G4;0.000625148!10409-106B4;0.000997836!10638-108I8;4.81331e-06!10636-108I6;2.09336e-05!10513-107D9;0.000316709!10420-106C6;0.00336461!10082-102B1;0.0128579!10014-101C5;0.0104108!10070-101I7;0.00213179!10452-106G2;0.000141446!10453-106G3;0.00516256!10449-106F8;0.000326678!10042-101F6;0.000150722!10069-101I6;1.57771e-06!10193-103E4;0.00022168!10631-108I1;6.46406e-06!10438-106E6;5.31764e-06!10488-107B2;0.00708224!10196-103E7;0.000110936!10071-101I8;0.00430075!10071-101I8;5.35499e-05!10041-101F5;0.00101139!10451-106G1;0.000179058!10450-106F9;0.000402077!10604-108F1;6.08657e-05!10605-108F2;0.0034645!10606-108F3;0.00467551!10603-108E9;0.00781929!10497-107C2;0.012775!10448-106F7;0.00178548!10643-109A4;0.00437657!10426-106D3;0.00185733!10431-106D8;0.000192076!10197-103E8;0.000339567!10443-106F2;5.36627e-05!10815-111B5;0.000205299!10816-111B6;0.000353832!10817-111B7;0.000561843!10015-101C6;0.000200532!10410-106B5;0.00229842!10054-101G9;0.273331!10758-110E2;0.000221191!10711-109H9;0.0200918!10040-101F4;0.00118847!10470-106I2;2.86582e-05!10415-106C1;0.00128143!10198-103E9;0.00262689!10614-108G2;3.7055e-05!10612-108F9;0.33408!10549-107H9;0.0104963!10615-108G3;0.0012874!10487-107B1;0.728565!10433-106E1;0.000685095!10688-109F4;0.0189558!10444-106F3;0.00749043!10444-106F3;0.119843!10485-107A8;0.0671355!10413-106B8;0.0354387!10175-103C4;0.945884!10161-103A8;8.0879e-06!12131-128D7;1.03522e-06!10624-108H3;0.064968!10712-109I1;0.972642!10205-103F7;0.0025876!10206-103F8;0.000145338!10207-103F9;0.000214656!10050-101G5;0.00510137!10051-101G6;0.0976067!10016-101C7;0.0175632!10046-101G1;0.00623752!10778-110G4;0.00163856!10633-108I3;0.0162181!10818-111B8;0.0637771!10819-111B9;0.0194589!10820-111C1;0.014173!10484-107A7;0.018787!10808-111A7;0.017655!10169-103B7;0.000136879!10153-102I9;2.4328e-05!13425-144D5;7.24697e-06!13433-144E4;0.00479423!13437-144E8;0.00313032!11904-125F5;0.00166754!11905-125F6;0.052188!10039-101F3;0.0087652!10791-110H8;2.88363e-05!10017-101C8;0.0036543!10045-101F9;0.0202336!10509-107D5;0.00899361!10839-111E2;0.0222116!10692-109F8;0.00123236!10079-102A7;0.00265438!10078-102A6;0.00041331!10721-110A1;0.0120986!10569-108B2;0.0765214!10570-108B3;0.0254006!10571-108B4;0.0303106!10647-109A8;0.0326095!10752-110D5;0.209969!10782-110G8;2.92521e-06!10726-110A6;0.173208!10018-101C9;0.110227!10086-102B5;0.859943!10182-103D2;0.206694!10165-103B3;1.16735e-05!10499-107C4;1.03722e-05!10408-106B3;0.000544479!10019-101D1;0.054466!10068-101I5;0.00127698!10075-102A3;0.000663567!10077-102A5;0.00424206!10727-110A7;0.2729!10775-110G1;0.000496541!10412-106B7;9.65878e-06!12231-129F8;0.0120284!12232-129F9;0.0755739!12233-129G1;0.0125415!12234-129G2;0.0301018!10414-106B9;0.166706!10170-103B8;0.00959202!10183-103D3;6.806e-05!10150-102I6;8.79252e-05!10174-103C3;2.46686e-05!10155-103A2;6.66419e-06!10038-101F2;1.10843e-05!10838-111E1;7.52332e-06!10759-110E3;0.893229!10514-107E1;0.00785258!10465-106H6;0.0316247!10691-109F7;0.0143896!10843-111E6;0.00402529!10844-111E7;0.0689395!11747-123G1;0.650991!11748-123G2;0.96476!11749-123G3;0.50601!11750-123G4;0.8757!11751-123G5;0.279973!11840-124H4;0.0916438!11752-123G6;0.0474315!11753-123G7;0.583021!11754-123G8;0.537375!11755-123G9;0.385849!11756-123H1;0.754647!11833-124G6;0.833977!11760-123H5;0.689316!11836-124G9;0.535962!11758-123H3;0.109184!11835-124G8;0.13673!11762-123H7;0.167066!11838-124H2;0.312797!11757-123H2;0.436296!11759-123H4;0.996004!11761-123H6;0.168308!11842-124H6;0.33507!11837-124H1;0.186291!10568-108B1;0.194472!13230-141I8;0.391113!13231-141I9;0.044973!10696-109G3;0.0223228!10493-107B7;0.00241321!10494-107B8;0.00135455!10850-111F4;0.0177935!10851-111F5;0.00221002!10852-111F6;0.0427025!10853-111F7;0.00866601!10854-111F8;0.000897138!10855-111F9;0.0132036!10856-111G1;0.2822!10847-111F1;0.0221924!10846-111E9;0.000649145!10848-111F2;0.000556339!10845-111E8;1.87437e-06!10857-111G2;0.00443458!10858-111G3;0.000104533!10156-103A3;0.0169799!11901-125F2;1.37712e-05!11902-125F3;0.00463247!11903-125F4;0.0137478!10689-109F5;0.00567961!10648-109A9;0.0446035!10784-110H1;0.0138028!10744-110C6;0.000346525!10772-110F7;0.133765!10474-106I6;3.21048e-05!10600-108E6;0.000919785!10684-109E9;0.24179!12226-129F3;0.167113!12227-129F4;2.86134e-05!10508-107D4;0.0370625!10539-107G8;0.221818!10607-108F4;0.212296!10555-107I6;0.283367!10774-110F9;0.641684!10637-108I7;0.0083749!10663-109C6;0.353423!10728-110A8;0.75722!10729-110A9;0.294528!10430-106D7;0.0389472!10730-110B1;7.70372e-05!10813-111B3;0.711882!10812-111B2;0.01511!10037-101F1;0.236588!10172-103C1;2.05325e-05!10163-103B1;0.000140844!10076-102A4;1.51103e-05!10073-102A1;1.23844e-05!10036-101E9;0.00179605!10195-103E6;1.65455e-05!10277-104E7;1.6969e-05!10434-106E2;9.71561e-09!10550-107I1;0.00190006!10545-107H5;0.00070501!10544-107H4;0.00125644!10704-109H2;0.0033938!10510-107D6;0.814388!10558-107I9;0.148648!10020-101D2;0.934957!10732-110B3;3.81288e-05!10049-101G4;0.769065!10698-109G5;0.29053!10437-106E5;0.000460427!10417-106C3;0.0550971!10035-101E8;0.000671423!10171-103B9;2.87604e-05!10157-103A4;6.34886e-05!10034-101E7;3.429e-05!10072-101I9;1.72988e-05!10199-103F1;0.00186239!10200-103F2;0.0543416!10697-109G4;0.000779919!10723-110A3;0.627019!10179-103C8;0.0155461!10160-103A7;1.97722e-05!10180-103C9;5.4542e-05!10162-103A9;8.67894e-05!10021-101D3;0.000403884!10840-111E3;0.0277924!10706-109H4;3.41758e-06!10033-101E6;0.54134!10032-101E5;6.72066e-05!10490-107B4;2.83306e-05!10439-106E7;0.000154763!10022-101D4;0.000296804!10176-103C5;7.1026e-05!10469-106I1;5.37356e-05!10067-101I4;0.00426781!10411-106B6;4.55277e-05!10471-106I3;0.137906!10030-101E3;0.0182716!10475-106I7;8.61942e-05!10787-110H4;0.11448!10477-106I9;0.018757!10695-109G2;0.488778!11771-123I7;7.61869e-06!11772-123I8;0.00529993!11773-123I9;0.269576!10093-102C3;0.414172!10442-106F1;0.0429963!10442-106F1;0.000634623!10201-103F3;0.00137498!10639-108I9;0.000230312!11843-124H7;0.0645162!11841-124H5;0.00308169!10693-109F9;3.58868e-06!10436-106E4;0.0429237!10483-107A6;0.000845784!10282-104F3;0.00111945!10023-101D5;0.0179395!10066-101I3;0.0104643!10065-101I2;0.000268594!10800-110I8;0.0014598!10610-108F7;0.206284!10841-111E4;0.70972!10541-107H1;0.100422!10842-111E5;0.00222377!10562-108A4;0.490078!10024-101D6;0.879542!10064-101I1;0.00495899!10609-108F6;0.00178463!10048-101G3;0.534215!10781-110G7;3.16502e-05!10181-103D1;0.743336!10159-103A6;2.42356e-06!10056-101H2;1.45922e-06!10737-110B8;1.63827e-05!10025-101D7;0.241875!10044-101F8;0.794548!10424-106D1;0.0508899!10463-106H4;3.12618e-05!10616-108G4;0.0014312!10486-107A9;0.00243691!10062-101H8;0.000467443!10202-103F4;6.3461e-08!10158-103A5;0.0132244!10441-106E9;6.15221e-07!10031-101E4;0.00539698!10063-101H9;2.04537e-05!10063-101H9;0.000480191!11763-123H8;0.000368781!11765-123I1;0.10138!11768-123I4;0.0389578!10807-111A6;0.144082!10790-110H7;0.00175626!10798-110I6;0.00303856!10786-110H3;0.449407!10591-108D6;0.00430487!10593-108D8;0.0006425!10590-108D5;0.00355395!10026-101D8;1.06205e-06!10096-102C6;0.0139672!10168-103B6;0.968178!10154-103A1;1.23818e-05!10209-103G2;1.6964e-06!10061-101H7;0.00262183!10027-101D9;0.000297217!10043-101F7;0.578643!10783-110G9;0.145938!10028-101E1;0.087303!10060-101H6;0.0188925!10203-103F5;0.00090847!10059-101H5;0.00839031!10047-101G2;0.00225712!10029-101E2;0.0392032!10058-101H4;0.00201171!10418-106C4;0.00012328!10492-107B6;0.00484482!10694-109G1;0.000392688!10797-110I5;0.00478166!10057-101H3;0.0270557!10100-102D1;0.00117454!10055-101H1;8.2107e-05!10204-103F6;0.00163377!10191-103E2;3.85495e-05!10563-108A5;0.000228407
|name=CNhs11185_bl_f2
|name=CNhs11185_bl_f2
|tomtom_result=CRZ1#MA0285.1;-2;0.000305441;0.14539;0.29078;9;AACACAGCCCCT;CTAAGCCAC;+!ACE2#MA0267.1;-2;0.00327887;1.56074;0.797602;7;AACACAGCCCCT;ACCAGCA;+!SWI5#MA0402.1;-1;0.00336202;1.60032;0.797602;8;AACACAGCCCCT;AACCAGCA;-!SP1#MA0079.1;-1;0.00359362;1.71056;0.797602;10;AACACAGCCCCT;ACCCCGCCCC;-!Dof2#MA0020.1;-3;0.00601921;2.86514;0.797602;6;AACACAGCCCCT;AAAGCA;+!Pax4#MA0068.1;14;0.00606848;2.8886;0.797602;12;AACACAGCCCCT;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!Pax5#MA0014.1;9;0.00662935;3.15557;0.797602;11;AACACAGCCCCT;CCGCTACGCTTCAGTGCTCT;-!TOD6#MA0350.1;1;0.00670254;3.19041;0.797602;12;AACACAGCCCCT;AGGCACAGCTCATCGCGTTTT;+!Mafb#MA0117.1;0;0.0092951;4.42447;0.983215;8;AACACAGCCCCT;GCGTCAGC;-!NHLH1#MA0048.1;-1;0.0151245;7.19924;1;11;AACACAGCCCCT;GCGCAGCTGCGT;+!MNB1A#MA0053.1;-3;0.0167376;7.96708;1;5;AACACAGCCCCT;AAAGC;+!DOT6#MA0351.1;1;0.0176647;8.40841;1;12;AACACAGCCCCT;TTCTGCACCTCATCGCATCCT;+!GAL4#MA0299.1;3;0.0196715;9.36364;1;12;AACACAGCCCCT;CGGGGAACAGTACTC;+!PBF#MA0064.1;-3;0.0201853;9.6082;1;5;AACACAGCCCCT;AAAGC;+
}}
}}

Latest revision as of 12:16, 7 September 2012

Full Name: CNhs11185_bl_f2

Motif matrix
POACGT
1801.6986609744673416.0694217230095209.45914964431006478.77698634427105
2611.8550681345185385.5664084608744301.14470363697524607.4380384536881
3618.0863094125173755.8117205425359342.3661469177865189.74004181321786
4836.2997048301053429.4910368969196343.97056020491846296.2429167541131
5613.68511887550781231.329804118073826.42238747314724634.56690821932685
61901.00091606490171.76353236649715541.46885496040288821.770915294252753
70.63225131786072830.30936185363570251892.573001242761612.489604271796603
875.442947286940271826.71254653627031.83857882119538532.010146041649006
9429.37743357804976743.147485195741328.771365071323988704.7079348409421
10122.48448642900581948.1891882366032140.03449996470454695.2960440557442
11358.34104506248354735.302128953774276.05464761312385536.3063970566751
12367.57734387856937352.3675620296321371.68257730688265814.3767354709728

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CRZ1#MA0285.1-20.0003054410.145390.290789AACACAGCCCCTCTAAGCCAC+
ACE2#MA0267.1-20.003278871.560740.7976027AACACAGCCCCTACCAGCA+
SWI5#MA0402.1-10.003362021.600320.7976028AACACAGCCCCTAACCAGCA-
SP1#MA0079.1-10.003593621.710560.79760210AACACAGCCCCTACCCCGCCCC-
Dof2#MA0020.1-30.006019212.865140.7976026AACACAGCCCCTAAAGCA+
Pax4#MA0068.1140.006068482.88860.79760212AACACAGCCCCTGAAAAATTTCCCATACTCCACTCCCCCCCC+
Pax5#MA0014.190.006629353.155570.79760211AACACAGCCCCTCCGCTACGCTTCAGTGCTCT-
TOD6#MA0350.110.006702543.190410.79760212AACACAGCCCCTAGGCACAGCTCATCGCGTTTT+
Mafb#MA0117.100.00929514.424470.9832158AACACAGCCCCTGCGTCAGC-
NHLH1#MA0048.1-10.01512457.19924111AACACAGCCCCTGCGCAGCTGCGT+
MNB1A#MA0053.1-30.01673767.9670815AACACAGCCCCTAAAGC+
DOT6#MA0351.110.01766478.40841112AACACAGCCCCTTTCTGCACCTCATCGCATCCT+
GAL4#MA0299.130.01967159.36364112AACACAGCCCCTCGGGGAACAGTACTC+
PBF#MA0064.1-30.02018539.608215AACACAGCCCCTAAAGC+
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