Personal tools

Coexpression cluster:C75: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{Coexpression_clusters
{{Coexpression_clusters
|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65708249243269,0.518905469136572,0.50070643982006,0,0,0,0,0,0.200631895234306,0.635882918321575,0.613547449186939,0.690744865101455,0,0,0,0.0589565109853561,0,0.0943257785523457,0.165795549095301,0.149578685266771,0.209357552049835,0.173106163806551,0.139344652845213,0.232855561555545,0.251056495368607,0.216293844171574,0.371855321441455,0.0811572263527992,0.104796384789156,0.161202330391475,0.207410238582937,0.21533560773887,0.357682244950033,0,0.145795150225341,0.154187968871398,0.198772098536566,0.195175748476722,0.210270953277894,0.112798185287747,0.182267080928499,0.217896074132256,0.205583124092593,0.136174228629411,0.212966178241721,0.213189816297791,0.314503754006501,0.264495424302979,0.193581802139666,0.161526918504429,0.170899999429155,0.195906702716978,0.145455399178477,0.135237094603344,0,0,0,0.154341861042433,0,0,0,0,0.515456810409039,0.441178319094873,0.464096826824654,0.365808586596611,0.428381961848574,0,0.551111581431802,0.656778051334362,0.717155814401537,0,0.296175082262729,0.289342666169155,0,0.0873628578078838,0.269141611203655,0.221310329587653,0.187973878616286,0.0523442574910016,0.100411454806203,0,0,0,0.202255646361428,0.18613148201837,0,0.0466158536071809,0.41117138750593,0.434271378667214,0.355087084824636,0,0,0,0.114327445550711,0.0186079472900182,0,0,0,0.795308131940447,0.802691913992371,0.715995635891775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16937498165142,0.196451135708678,0.13718235424895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949722921695758,1.1015205194501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351016793561865,0.302945276961852,0.378155567477979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851744582050676,0.909326518336528,0.913135931762896,0,0,0,0,0,0.397594876354309,0,0.5423888076298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261755686906388,0.580273000433507,0.29237748405828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0504125515893149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0234141998508787,0,0,0,0,0,0,0,0,0,0,0,0.0266094859650764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161352362291136,0.406131906607941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0473659963914933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0261550693490902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|full_id=C75_Eosinophils_Natural_CD8_Basophils_CD14_CD4_Peripheral
|full_id=C75_Eosinophils_Natural_CD8_Basophils_CD14_CD4_Peripheral
|id=C75
|id=C75

Revision as of 18:28, 12 September 2012


Full id: C75_Eosinophils_Natural_CD8_Basophils_CD14_CD4_Peripheral



Phase1 CAGE Peaks

Hg19::chr10:11208955..11208966,-p@chr10:11208955..11208966
-
Hg19::chr10:121028416..121028441,-p@chr10:121028416..121028441
-
Hg19::chr10:126406690..126406702,-p@chr10:126406690..126406702
-
Hg19::chr10:15139747..15139782,+p5@RPP38
Hg19::chr10:22291850..22291865,+p@chr10:22291850..22291865
+
Hg19::chr10:3826854..3826861,-p@chr10:3826854..3826861
-
Hg19::chr10:43634395..43634406,-p@chr10:43634395..43634406
-
Hg19::chr11:102187923..102187941,-p@chr11:102187923..102187941
-
Hg19::chr11:30344926..30344961,+p@chr11:30344926..30344961
+
Hg19::chr11:58345474..58345491,-p3@LPXN
Hg19::chr11:62359322..62359334,+p@chr11:62359322..62359334
+
Hg19::chr11:65193698..65193705,-p@chr11:65193698..65193705
-
Hg19::chr11:82611610..82611625,+p@chr11:82611610..82611625
+
Hg19::chr12:10365911..10365915,-p@chr12:10365911..10365915
-
Hg19::chr12:10366003..10366014,-p@chr12:10366003..10366014
-
Hg19::chr12:104323304..104323327,+p@chr12:104323304..104323327
+
Hg19::chr12:106695681..106695697,-p@chr12:106695681..106695697
-
Hg19::chr12:25538587..25538605,+p@chr12:25538587..25538605
+
Hg19::chr12:46122540..46122548,-p@chr12:46122540..46122548
-
Hg19::chr12:49412525..49412539,-p2@PRKAG1
Hg19::chr12:57872183..57872194,-p16@ARHGAP9
Hg19::chr12:6641964..6641975,+p@chr12:6641964..6641975
+
Hg19::chr12:8179456..8179475,+p@chr12:8179456..8179475
+
Hg19::chr12:9913567..9913595,-p2@CD69
Hg19::chr13:50698542..50698555,-p@chr13:50698542..50698555
-
Hg19::chr13:50698573..50698596,-p@chr13:50698573..50698596
-
Hg19::chr14:23388740..23388761,+p2@ENST00000424245
Hg19::chr14:52313371..52313386,-p@chr14:52313371..52313386
-
Hg19::chr14:52313984..52314002,-p@chr14:52313984..52314002
-
Hg19::chr14:52327208..52327225,-p@chr14:52327208..52327225
-
Hg19::chr14:52327712..52327727,+p15@GNG2
Hg19::chr14:52333145..52333155,-p@chr14:52333145..52333155
-
Hg19::chr14:52333334..52333348,+p@chr14:52333334..52333348
+
Hg19::chr14:69262473..69262484,-p@chr14:69262473..69262484
-
Hg19::chr14:74227209..74227225,+p@chr14:74227209..74227225
+
Hg19::chr14:75726033..75726042,+p2@ENST00000555909
Hg19::chr14:75726044..75726086,+p1@ENST00000555909
Hg19::chr14:75741792..75741807,+p@chr14:75741792..75741807
+
Hg19::chr14:75744973..75744991,-p@chr14:75744973..75744991
-
Hg19::chr14:94429517..94429532,-p@chr14:94429517..94429532
-
Hg19::chr15:55582399..55582403,+p@chr15:55582399..55582403
+
Hg19::chr15:75746723..75746749,+p@chr15:75746723..75746749
+
Hg19::chr16:15737233..15737254,+p3@NDE1
Hg19::chr16:15766837..15766840,-p@chr16:15766837..15766840
-
Hg19::chr16:27379190..27379201,+p@chr16:27379190..27379201
+
Hg19::chr16:28835627..28835647,-p@chr16:28835627..28835647
-
Hg19::chr16:85063118..85063124,-p@chr16:85063118..85063124
-
Hg19::chr17:33415837..33415862,-p@chr17:33415837..33415862
-
Hg19::chr17:38374969..38374995,-p@chr17:38374969..38374995
-
Hg19::chr17:38478742..38478783,-p@chr17:38478742..38478783
-
Hg19::chr17:38479445..38479465,+p@chr17:38479445..38479465
+
Hg19::chr17:38480295..38480325,-p@chr17:38480295..38480325
-
Hg19::chr17:38480329..38480352,-p@chr17:38480329..38480352
-
Hg19::chr17:38480488..38480504,+p@chr17:38480488..38480504
+
Hg19::chr17:38482456..38482468,-p@chr17:38482456..38482468
-
Hg19::chr17:56422008..56422024,+p@chr17:56422008..56422024
+
Hg19::chr17:62971940..62971944,-p13@AMZ2P1
Hg19::chr17:62972295..62972313,+p@chr17:62972295..62972313
+
Hg19::chr17:62982601..62982604,-p@chr17:62982601..62982604
-
Hg19::chr17:66243861..66243874,+p7@AMZ2
Hg19::chr17:66508421..66508435,-p@chr17:66508421..66508435
-
Hg19::chr17:74712523..74712551,+p@chr17:74712523..74712551
+
Hg19::chr17:74721485..74721489,-p@chr17:74721485..74721489
-
Hg19::chr17:74721959..74721969,-p5@JMJD6
Hg19::chr17:7738759..7738770,-p@chr17:7738759..7738770
-
Hg19::chr17:7739159..7739197,+p@chr17:7739159..7739197
+
Hg19::chr17:7744830..7744841,-p@chr17:7744830..7744841
-
Hg19::chr17:7746957..7746964,-p@chr17:7746957..7746964
-
Hg19::chr17:7747314..7747325,-p@chr17:7747314..7747325
-
Hg19::chr17:8060155..8060178,+p@chr17:8060155..8060178
+
Hg19::chr17:8857783..8857803,-p@chr17:8857783..8857803
-
Hg19::chr19:10380695..10380713,+p@chr19:10380695..10380713
+
Hg19::chr19:13950145..13950160,+p@chr19:13950145..13950160
+
Hg19::chr19:13950605..13950657,+p@chr19:13950605..13950657
+
Hg19::chr19:13950775..13950788,+p@chr19:13950775..13950788
+
Hg19::chr19:13957681..13957691,+p@chr19:13957681..13957691
+
Hg19::chr19:13957704..13957725,+p@chr19:13957704..13957725
+
Hg19::chr19:13957738..13957749,+p@chr19:13957738..13957749
+
Hg19::chr19:14248044..14248065,+p@chr19:14248044..14248065
+
Hg19::chr19:14493041..14493072,+p@chr19:14493041..14493072
+
Hg19::chr19:16435247..16435259,-p@chr19:16435247..16435259
-
Hg19::chr19:16435475..16435483,-p@chr19:16435475..16435483
-
Hg19::chr19:18058552..18058569,-p@chr19:18058552..18058569
-
Hg19::chr19:18111669..18111677,-p@chr19:18111669..18111677
-
Hg19::chr19:39894786..39894801,+p@chr19:39894786..39894801
+
Hg19::chr19:41857636..41857667,+p@chr19:41857636..41857667
+
Hg19::chr19:45954356..45954397,+p@chr19:45954356..45954397
+
Hg19::chr19:45972508..45972531,-p@chr19:45972508..45972531
-
Hg19::chr19:54369656..54369673,+p16@MYADM
Hg19::chr19:54371876..54371893,-p@chr19:54371876..54371893
-
Hg19::chr19:54372356..54372368,-p3@ENST00000455835
Hg19::chr19:54372480..54372496,-p1@ENST00000455835
Hg19::chr19:54372737..54372755,-p5@ENST00000455835
Hg19::chr19:56146421..56146438,+p13@ZNF580
p4@ZNF581
Hg19::chr19:59085054..59085070,+p@chr19:59085054..59085070
+
Hg19::chr19:59085158..59085163,+p@chr19:59085158..59085163
+
Hg19::chr1:114472866..114472877,+p10@HIPK1
Hg19::chr1:114472905..114472919,+p9@HIPK1
Hg19::chr1:12239142..12239152,-p@chr1:12239142..12239152
-
Hg19::chr1:14027671..14027706,+p@chr1:14027671..14027706
+
Hg19::chr1:151029536..151029568,-p@chr1:151029536..151029568
-
Hg19::chr1:15736115..15736135,+p3@EFHD2
Hg19::chr1:159880335..159880355,-p1@HSPC081
Hg19::chr1:159893511..159893537,-p4@TAGLN2
Hg19::chr1:159893654..159893709,+p@chr1:159893654..159893709
+
Hg19::chr1:159893714..159893728,+p@chr1:159893714..159893728
+
Hg19::chr1:159894581..159894596,+p@chr1:159894581..159894596
+
Hg19::chr1:203296513..203296536,-p@chr1:203296513..203296536
-
Hg19::chr1:204380854..204380865,-p3@PPP1R15B
Hg19::chr1:212769621..212769628,-p@chr1:212769621..212769628
-
Hg19::chr1:2165919..2165932,-p@chr1:2165919..2165932
-
Hg19::chr1:2166007..2166047,+p@chr1:2166007..2166047
+
Hg19::chr1:234747310..234747334,-p@chr1:234747310..234747334
-
Hg19::chr1:234748505..234748539,-p@chr1:234748505..234748539
-
Hg19::chr1:235490580..235490602,+p10@GGPS1
Hg19::chr1:236029492..236029504,+p@chr1:236029492..236029504
+
Hg19::chr1:236029525..236029533,+p@chr1:236029525..236029533
+
Hg19::chr1:236030037..236030051,-p@chr1:236030037..236030051
-
Hg19::chr1:236030103..236030119,-p@chr1:236030103..236030119
-
Hg19::chr1:236040072..236040107,+p@chr1:236040072..236040107
+
Hg19::chr1:245026904..245026918,+p@chr1:245026904..245026918
+
Hg19::chr1:36689679..36689717,-p@chr1:36689679..36689717
-
Hg19::chr20:23331547..23331558,+p3@NXT1
Hg19::chr20:4795070..4795106,+p@chr20:4795070..4795106
+
Hg19::chr20:56882271..56882292,+p@chr20:56882271..56882292
+
Hg19::chr20:62527815..62527818,-p@chr20:62527815..62527818
-
Hg19::chr21:38739768..38739774,-p@chr21:38739768..38739774
-
Hg19::chr21:43640151..43640168,-p@chr21:43640151..43640168
-
Hg19::chr21:43640820..43640830,+p@chr21:43640820..43640830
+
Hg19::chr22:31686994..31687005,+p@chr22:31686994..31687005
+
Hg19::chr22:31687044..31687060,+p@chr22:31687044..31687060
+
Hg19::chr22:36761081..36761108,-p36@MYH9
Hg19::chr22:47131164..47131179,+p@chr22:47131164..47131179
+
Hg19::chr22:47158351..47158356,-p@chr22:47158351..47158356
-
Hg19::chr2:136500212..136500216,-p1@AK056055
Hg19::chr2:136874641..136874658,+p@chr2:136874641..136874658
+
Hg19::chr2:145273256..145273269,-p@chr2:145273256..145273269
-
Hg19::chr2:157190082..157190099,+p@chr2:157190082..157190099
+
Hg19::chr2:178078011..178078032,-p@chr2:178078011..178078032
-
Hg19::chr2:178128711..178128729,+p1@ENST00000428541
Hg19::chr2:178128773..178128788,+p3@ENST00000428541
Hg19::chr2:198299998..198300018,+p@chr2:198299998..198300018
+
Hg19::chr2:198317813..198317851,-p@chr2:198317813..198317851
-
Hg19::chr2:208393865..208393883,+p@chr2:208393865..208393883
+
Hg19::chr2:219433975..219433993,-p@chr2:219433975..219433993
-
Hg19::chr2:238582192..238582211,+p@chr2:238582192..238582211
+
Hg19::chr2:238582238..238582251,+p@chr2:238582238..238582251
+
Hg19::chr2:238583492..238583501,-p@chr2:238583492..238583501
-
Hg19::chr2:238596480..238596487,-p@chr2:238596480..238596487
-
Hg19::chr2:30370686..30370701,-p@chr2:30370686..30370701
-
Hg19::chr2:74685041..74685060,-p@chr2:74685041..74685060
-
Hg19::chr2:7889352..7889371,-p@chr2:7889352..7889371
-
Hg19::chr3:119013024..119013027,+p12@ARHGAP31
Hg19::chr3:150126904..150126958,+p7@TSC22D2
Hg19::chr3:156878100..156878138,+p@chr3:156878100..156878138
+
Hg19::chr3:177077886..177077897,+p@chr3:177077886..177077897
+
Hg19::chr3:177077917..177077934,+p@chr3:177077917..177077934
+
Hg19::chr3:39093904..39093915,-p@chr3:39093904..39093915
-
Hg19::chr3:5018959..5018971,+p@chr3:5018959..5018971
+
Hg19::chr3:5019050..5019076,+p@chr3:5019050..5019076
+
Hg19::chr3:5019230..5019241,+p@chr3:5019230..5019241
+
Hg19::chr3:52719543..52719576,+p12@GNL3
Hg19::chr3:57583545..57583570,+p@chr3:57583545..57583570
+
Hg19::chr4:186346970..186346995,-p@chr4:186346970..186346995
-
Hg19::chr4:26320869..26320880,+p30@RBPJ
Hg19::chr4:26320884..26320897,+p26@RBPJ
Hg19::chr4:54930230..54930236,+p@chr4:54930230..54930236
+
Hg19::chr4:78783292..78783310,+p4@MRPL1
Hg19::chr5:106812720..106812731,-p@chr5:106812720..106812731
-
Hg19::chr5:106812744..106812762,-p@chr5:106812744..106812762
-
Hg19::chr5:107717914..107717949,-p14@FBXL17
Hg19::chr5:108745177..108745194,+p@chr5:108745177..108745194
+
Hg19::chr5:108745198..108745212,+p@chr5:108745198..108745212
+
Hg19::chr5:133984112..133984120,-p@chr5:133984112..133984120
-
Hg19::chr5:142382063..142382078,-p@chr5:142382063..142382078
-
Hg19::chr5:169720333..169720354,-p@chr5:169720333..169720354
-
Hg19::chr5:171434015..171434056,+p@chr5:171434015..171434056
+
Hg19::chr5:171606085..171606099,-p@chr5:171606085..171606099
-
Hg19::chr5:172191555..172191559,-p@chr5:172191555..172191559
-
Hg19::chr5:176854406..176854415,+p@chr5:176854406..176854415
+
Hg19::chr5:179248726..179248764,-p@chr5:179248726..179248764
-
Hg19::chr5:180587568..180587583,-p@chr5:180587568..180587583
-
Hg19::chr5:180587605..180587618,-p@chr5:180587605..180587618
-
Hg19::chr5:39073411..39073429,-p@chr5:39073411..39073429
-
Hg19::chr5:49964040..49964073,+p@chr5:49964040..49964073
+
Hg19::chr5:86708579..86708607,-p4@CCNH
Hg19::chr5:86708610..86708627,-p3@CCNH
Hg19::chr5:98263084..98263098,+p@chr5:98263084..98263098
+
Hg19::chr5:98263147..98263158,+p@chr5:98263147..98263158
+
Hg19::chr6:109330919..109330965,+p2@AF086525
Hg19::chr6:12008838..12008851,-p@chr6:12008838..12008851
-
Hg19::chr6:143268479..143268502,-p@chr6:143268479..143268502
-
Hg19::chr6:144472464..144472478,-p@chr6:144472464..144472478
-
Hg19::chr6:24720572..24720599,+p@chr6:24720572..24720599
+
Hg19::chr6:28105369..28105380,-p3@uc003nkl.1
p3@uc010jqw.1
p5@uc003nkk.1
Hg19::chr6:30544083..30544085,+p@chr6:30544083..30544085
+
Hg19::chr6:33281969..33281982,+p@chr6:33281969..33281982
+
Hg19::chr6:33281983..33281992,+p@chr6:33281983..33281992
+
Hg19::chr6:41041625..41041639,+p@chr6:41041625..41041639
+
Hg19::chr7:104624418..104624476,+p@chr7:104624418..104624476
+
Hg19::chr7:104624577..104624592,-p2@uc003vcj.1
Hg19::chr7:104652906..104652924,-p@chr7:104652906..104652924
-
Hg19::chr7:104652927..104652977,-p@chr7:104652927..104652977
-
Hg19::chr7:104653833..104653859,+p@chr7:104653833..104653859
+
Hg19::chr7:104654708..104654711,+p6@MLL5
Hg19::chr7:106808946..106808961,-p@chr7:106808946..106808961
-
Hg19::chr7:108166913..108166931,+p@chr7:108166913..108166931
+
Hg19::chr7:139025909..139025927,+p4@C7orf55
p7@LUC7L2
Hg19::chr7:140623930..140623946,-p@chr7:140623930..140623946
-
Hg19::chr7:140623950..140623972,-p@chr7:140623950..140623972
-
Hg19::chr7:140624224..140624251,+p@chr7:140624224..140624251
+
Hg19::chr7:155090681..155090698,-p@chr7:155090681..155090698
-
Hg19::chr7:32931882..32931906,+p@chr7:32931882..32931906
+
Hg19::chr7:39989946..39989977,+p6@CDK13
Hg19::chr7:43688635..43688639,+p@chr7:43688635..43688639
+
Hg19::chr7:44085622..44085636,+p@chr7:44085622..44085636
+
Hg19::chr7:44924238..44924257,+p2@BC047792
Hg19::chr7:66119277..66119290,-p@chr7:66119277..66119290
-
Hg19::chr7:98978644..98978675,-p@chr7:98978644..98978675
-
Hg19::chr8:103424565..103424568,+p@chr8:103424565..103424568
+
Hg19::chr8:123793773..123793791,-p@chr8:123793773..123793791
-
Hg19::chr8:123793793..123793848,-p@chr8:123793793..123793848
-
Hg19::chr8:146103749..146103775,-p@chr8:146103749..146103775
-
Hg19::chr8:29939997..29940018,+p@chr8:29939997..29940018
+
Hg19::chr8:29940023..29940034,+p@chr8:29940023..29940034
+
Hg19::chr9:102581971..102581984,+p@chr9:102581971..102581984
+
Hg19::chr9:102582557..102582589,+p@chr9:102582557..102582589
+
Hg19::chr9:102582592..102582608,+p@chr9:102582592..102582608
+
Hg19::chr9:102584935..102584960,-p@chr9:102584935..102584960
-
Hg19::chr9:132176261..132176274,+p@chr9:132176261..132176274
+
Hg19::chr9:132388566..132388581,+p2@METTL11A
Hg19::chr9:132650191..132650215,+p@chr9:132650191..132650215
+
Hg19::chr9:136009131..136009140,-p@chr9:136009131..136009140
-
Hg19::chr9:139797163..139797174,+p@chr9:139797163..139797174
+
Hg19::chr9:88356112..88356128,+p@chr9:88356112..88356128
+
Hg19::chrX:106954324..106954343,-p@chrX:106954324..106954343
-
Hg19::chrX:106954508..106954537,+p@chrX:106954508..106954537
+
Hg19::chrX:15354246..15354257,-p@chrX:15354246..15354257
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data


p.valueFDRnGenesnPathwayName
6.83169628775205e-050.0432446375014705384Ribosome biogenesis in eukaryotes (KEGG):03008



Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data


No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>


Cell Type
Ontology termp-valuen
leukocyte2.51e-49140
hematopoietic stem cell1.27e-45172
angioblastic mesenchymal cell1.27e-45172
hematopoietic cell1.57e-42182
hematopoietic oligopotent progenitor cell1.48e-41165
hematopoietic multipotent progenitor cell1.48e-41165
hematopoietic lineage restricted progenitor cell3.35e-39124
nongranular leukocyte2.70e-37119
CD14-positive, CD16-negative classical monocyte1.48e-2342
classical monocyte9.19e-2245
lymphocyte2.27e-2153
common lymphoid progenitor2.27e-2153
lymphoid lineage restricted progenitor cell3.20e-2152
myeloid leukocyte3.61e-2176
myeloid cell7.62e-20112
common myeloid progenitor7.62e-20112
granulocyte monocyte progenitor cell5.64e-1871
myeloid lineage restricted progenitor cell9.72e-1770
macrophage dendritic cell progenitor2.47e-1565
monopoietic cell2.33e-1463
monocyte2.33e-1463
monoblast2.33e-1463
promonocyte2.33e-1463
mesenchymal cell8.45e-13358
connective tissue cell2.31e-12365
T cell3.80e-1125
pro-T cell3.80e-1125
motile cell1.67e-10390
mature alpha-beta T cell1.97e-1018
alpha-beta T cell1.97e-1018
immature T cell1.97e-1018
mature T cell1.97e-1018
immature alpha-beta T cell1.97e-1018
lymphocyte of B lineage2.04e-0924
pro-B cell2.04e-0924
B cell2.55e-0714
intermediate monocyte9.78e-079
CD14-positive, CD16-positive monocyte9.78e-079
Uber Anatomy
Ontology termp-valuen
hematopoietic system1.97e-24102
blood island1.97e-24102
hemolymphoid system1.89e-20112
bone marrow4.09e-1780
bone element5.92e-1686
connective tissue4.43e-12375
immune system1.26e-11115
skeletal element2.26e-10101
skeletal system2.26e-10101
blood1.58e-0715
haemolymphatic fluid1.58e-0715
organism substance1.58e-0715


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data


(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
ATF3#467272.548343328580829.51208162015812e-060.000252717449078528
BATF#10538343.479685970329093.19429701252526e-103.2139613265041e-08
BCL11A#53335475.602371386006448.46810614496016e-222.32736983598288e-19
BCL3#602446.386859341867591.38259004291854e-223.94525468558387e-20
BCLAF1#9774242.183460263205560.0003141696640944540.00323043866775236
BHLHE40#8553122.262444380519870.007687106242665910.0316574798453385
BRCA1#672363.053076904017042.9225362610217e-092.45754238780069e-07
CCNT2#905942.502533395943221.18087893923067e-182.74066256742914e-16
CEBPB#1051662.21048631640522.84883517768062e-102.89425580857769e-08
CHD2#1106703.042359657093191.0470261680827e-172.25000753021376e-15
CTBP2#1488133.425718505929690.0001384796888499080.00180851322043211
CTCF#10664681.531501820878580.0001290731376028270.00171526522688658
E2F1#1869972.000070394299566.3522457590317e-139.1759639671855e-11
E2F4#1874371.969404334729096.06132888394657e-050.000994875259013823
E2F6#1876972.04480716796071.60416810763934e-132.45656470665316e-11
EBF1#18791003.742212960743288.94743498663488e-344.17170161861232e-31
EGR1#19581272.66175943294495.773326609236e-302.31019332468199e-27
ELF1#19971472.630001680439952.78750345720923e-361.43410873678559e-33
ELK4#2005412.796903142845332.52033438299484e-092.1278997787033e-07
EP300#2033942.67542236245791.2050754047878e-203.14642175501581e-18
ESR1#2099212.71487676142544.02594400921874e-050.000738436189636102
ETS1#2113522.125611630061011.34385543635067e-077.65272180572668e-06
FOS#2353702.646457443792471.29619278171863e-142.22653088700513e-12
FOSL1#8061172.836684265455220.0001325343597656760.00174153950673974
FOSL2#2355382.703141272997242.58286662292781e-081.79356387787206e-06
FOXA1#3169612.84019581811985.38956527973375e-148.72683423643586e-12
FOXA2#3170303.10468030495784.86678344148894e-083.1492069135419e-06
GABPB1#2553842.49447664806432.66908122667861e-165.23977771114826e-14
GATA1#2623522.962756401166481.30025880979469e-121.80342270698736e-10
GATA2#2624311.660054133362070.00386365866143180.0190544764103166
GATA3#2625192.174343742802160.001397023995983430.00909057876115348
GTF2B#2959192.550137683832610.0002088211185639120.00243214774190882
GTF2F1#2962361.927007527576790.0001189959546965830.00161568103387369
HDAC2#3066372.085621633425091.80530930199864e-050.000411220715793754
HEY1#234621171.986105008585584.05012303428591e-167.89161939510796e-14
HMGN3#9324742.54290979633591.32371244219662e-142.2663476024684e-12
HNF4G#3174182.174628594437150.001855219515586890.0109448834089352
IRF1#3659652.085780016729644.31593082279074e-093.52424940736077e-07
IRF3#3661112.171434766077250.01385997509705460.0487463188806628
IRF4#3662363.314800238331043.34321486752837e-103.36055839797685e-08
JUN#3725522.733895453787772.55593740006293e-113.01626605791156e-09
JUNB#3726293.729867004768121.56896950038446e-091.38279835992112e-07
JUND#3727681.998475411963159.46056406362997e-097.21205730103249e-07
MAX#4149932.521376732511191.22433452170818e-182.82894409541329e-16
MEF2A#4205473.701394339299467.61943467234818e-151.32627689624229e-12
MEF2C#4208284.860159352073428.29234177656483e-121.04342636482248e-09
MXI1#4601723.013584694414585.00537449900914e-181.10519303869348e-15
MYC#4609952.084524276482751.05090881016951e-131.64059589275476e-11
NFE2#477882.595101198374090.01312564358035360.0465445161581065
NFKB1#47901433.297449872519831.60497834339093e-461.05422851072582e-43
NFYA#4800282.167715376450650.0001101346059120010.00153099269357693
NFYB#4801322.253417580307421.61674496988943e-050.00037381276933868
NR3C1#2908362.264827058496764.00309224580791e-060.000129356111095276
NRF1#4899402.052147806337971.14090479994695e-050.000291047768445674
PAX5#50791143.194665842665014.04972610664319e-331.83891019500743e-30
PBX3#5090494.511811435506147.54137959948611e-191.77390572970885e-16
POLR2A#54302181.966994926427149.27805069476543e-506.82387560922962e-47
POU2F2#5452953.634797418006478.33401639558418e-313.42675723755282e-28
POU5F1#546045.637633637847150.005885481992598030.0264023819348372
PRDM1#63984.431292631175150.0005265826918707070.00455904582245584
RAD21#5885371.609816193831450.002673334871929370.0147389759113885
RFX5#5993552.784181073511472.87649191062555e-123.83675528293515e-10
RXRA#6256383.205190971794392.59523186831108e-102.64690840912637e-08
SIN3A#259421312.977159240389842.12231021559628e-361.10274605276945e-33
SMARCB1#6598413.144375407678388.12321878611607e-118.90221245333868e-09
SMARCC1#6599152.751892394094420.0004492960999640440.00417994257831327
SMC3#9126332.086062117154555.38538125805291e-050.000913354714533595
SP1#66671102.633705678972681.94160877300782e-246.05312473564667e-22
SP2#6668192.087886888164070.002199542509121680.0126747969603928
SPI1#6688893.068003328817322.31740644593553e-236.95481643123737e-21
SREBF1#6720163.160057105242916.13756268894141e-050.00100612291582225
SRF#6722492.840595524563962.93020137546429e-113.41167560147285e-09
STAT1#6772262.26206418036630.000100556005812050.00141497826610142
STAT2#6773123.290610311921380.000356860764709750.00356891519731127
STAT3#6774632.784564263952594.45548649866383e-147.27072741303049e-12
TAF1#68721542.163147596658721.70369662082267e-286.28736294636391e-26
TAF7#6879361.72937184276160.0009034955483600290.00658112509242384
TBP#69081552.41407334663841.23733402194197e-345.9826818480369e-32
TCF12#6938823.663975302433982.91301923408745e-269.78240565237488e-24
TCF7L2#6934562.534159191326436.68623085532168e-117.38945253226392e-09
TFAP2A#7020281.943368749769990.0006336731050226480.00520080042557645
TFAP2C#7022532.407097127405851.52937598858826e-091.3524682376983e-07
USF1#7391772.058132119096691.48164129397133e-101.56779265553264e-08
USF2#7392351.910617262510230.0001759680428160470.00213995417136296
WRNIP1#5689773.229998951452240.006579764842800250.0281137364651317
YY1#7528901.85716540960864.44531929018325e-104.33892244249952e-08
ZBTB7A#51341822.533010769940432.99748112731943e-165.8734321098708e-14
ZEB1#6935503.547989919652074.58067211392096e-158.0810948463816e-13
ZNF263#10127541.865459867220914.21278743626431e-060.000133529379986649



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data