FFCP PHASE1:Mm9::chr4:138387772..138387783,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr4:138387772..138387783,+ | |id=chr4:138387772..138387783,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.63e-20!9;CL:0002251!2.63e-20!9;CL:0000239!1.15e-14!6;CL:0000677!1.15e-14!6;CL:0000212!1.15e-14!6;CL:0000584!1.15e-14!6;CL:0000075!1.87e-12!7;CL:0000066!1.24e-11!25;CL:0002076!1.82e-11!15;CL:0000473!1.79e-08!3;CL:0000627!1.79e-08!3;CL:0000682!1.79e-08!3;CL:0000223!3.67e-08!20;CL:0002250!3.14e-07!3 | |ontology_enrichment_celltype=CL:0002563!2.63e-20!9;CL:0002251!2.63e-20!9;CL:0000239!1.15e-14!6;CL:0000677!1.15e-14!6;CL:0000212!1.15e-14!6;CL:0000584!1.15e-14!6;CL:0000075!1.87e-12!7;CL:0000066!1.24e-11!25;CL:0002076!1.82e-11!15;CL:0000473!1.79e-08!3;CL:0000627!1.79e-08!3;CL:0000682!1.79e-08!3;CL:0000223!3.67e-08!20;CL:0002250!3.14e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.46e-26,9;CL:0002251,8.46e-26,9;CL:0000239,1.70e-18,6;CL:0000677,1.70e-18,6;CL:0000584,1.70e-18,6;CL:0000075,9.12e-16,7;CL:0000066,1.85e-15,25;CL:0002076,7.19e-15,15;CL:0000223,9.08e-11,20;CL:0000682,1.70e-10,3;CL:0002250,6.83e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.26e-34!15;UBERON:0001242!2.10e-29!13;UBERON:0000060!2.10e-29!13;UBERON:0001262!2.10e-29!13;UBERON:0004786!2.10e-29!13;UBERON:0000160!2.58e-26!43;UBERON:0005409!5.49e-21!59;UBERON:0003350!2.63e-20!9;UBERON:0004808!2.63e-20!9;UBERON:0001277!2.63e-20!9;UBERON:0004923!7.59e-20!24;UBERON:0000485!2.75e-16!11;UBERON:0000331!8.62e-09!3;UBERON:0002116!8.62e-09!3;UBERON:0001204!8.62e-09!3;UBERON:0001168!8.62e-09!3;UBERON:0001007!4.27e-08!128;UBERON:0001555!4.27e-08!128;UBERON:0007026!4.27e-08!128;UBERON:0004119!7.12e-08!130;UBERON:0000925!7.12e-08!130;UBERON:0006595!7.12e-08!130 | |ontology_enrichment_uberon=UBERON:0000344!5.26e-34!15;UBERON:0001242!2.10e-29!13;UBERON:0000060!2.10e-29!13;UBERON:0001262!2.10e-29!13;UBERON:0004786!2.10e-29!13;UBERON:0000160!2.58e-26!43;UBERON:0005409!5.49e-21!59;UBERON:0003350!2.63e-20!9;UBERON:0004808!2.63e-20!9;UBERON:0001277!2.63e-20!9;UBERON:0004923!7.59e-20!24;UBERON:0000485!2.75e-16!11;UBERON:0000331!8.62e-09!3;UBERON:0002116!8.62e-09!3;UBERON:0001204!8.62e-09!3;UBERON:0001168!8.62e-09!3;UBERON:0001007!4.27e-08!128;UBERON:0001555!4.27e-08!128;UBERON:0007026!4.27e-08!128;UBERON:0004119!7.12e-08!130;UBERON:0000925!7.12e-08!130;UBERON:0006595!7.12e-08!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.49e-43,15;UBERON:0000160,1.33e-42,31;UBERON:0001242,1.38e-37,13;UBERON:0001262,1.38e-37,13;UBERON:0004786,1.38e-37,13;UBERON:0005409,3.51e-29,47;UBERON:0004923,4.93e-26,24;UBERON:0003350,8.46e-26,9;UBERON:0004808,8.46e-26,9;UBERON:0001277,8.46e-26,9;UBERON:0000485,7.82e-21,11;UBERON:0002108,2.05e-13,4;UBERON:0001007,2.14e-11,116;UBERON:0001555,2.14e-11,116;UBERON:0007026,2.14e-11,116;UBERON:0004119,4.06e-11,118;UBERON:0000925,4.06e-11,118;UBERON:0006595,4.06e-11,118;UBERON:0000331,6.63e-11,3;UBERON:0002116,6.63e-11,3;UBERON:0001204,6.63e-11,3;UBERON:0001168,6.63e-11,3;UBERON:0004921,2.72e-09,114;UBERON:0001962,2.21e-07,2;UBERON:0001961,2.21e-07,2;UBERON:0001744,2.21e-07,2 | |||
|phase1_expression=0,737.734011749609,572.844042391426,292.482892333705,467.335716039942,3936.76892633382,4604.03792085662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1874.31123302476,1734.56357414887,1211.62944428269,3745.90631859931,6231.42804927591,6806.63888492731,5112.68321230995,5686.7224067766,0,0,0,6.64358725427932,26.2650739666418,10.4126371693808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,210.385741357364,0,0,0,0,0,0,0,0,0,0,891.319365086982,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,3.72783522436244,0,0,106.525592021983,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,4560.18557154616,0,0,0,0,0,0,55.5199002007079,0,0.251335208800269,0.397912944082302,1.55971269695296,54.8279839279075,44.0921621744376,42.815373749689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.5965680043672,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0.463735671240843 | |phase1_expression=0,737.734011749609,572.844042391426,292.482892333705,467.335716039942,3936.76892633382,4604.03792085662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1874.31123302476,1734.56357414887,1211.62944428269,3745.90631859931,6231.42804927591,6806.63888492731,5112.68321230995,5686.7224067766,0,0,0,6.64358725427932,26.2650739666418,10.4126371693808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,210.385741357364,0,0,0,0,0,0,0,0,0,0,891.319365086982,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,3.72783522436244,0,0,106.525592021983,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,4560.18557154616,0,0,0,0,0,0,55.5199002007079,0,0.251335208800269,0.397912944082302,1.55971269695296,54.8279839279075,44.0921621744376,42.815373749689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.5965680043672,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0.463735671240843 | ||
|short_description=p1@Pla2g2a | |short_description=p1@Pla2g2a | ||
}} | }} |
Revision as of 06:02, 15 November 2012
Short description: | p1@Pla2g2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pla2g2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:499 |
Association with transcript: | 0bp_to_ENSMUST00000077582, ENSMUST00000135748, NR_002926, uc008vlk.1_5end |
EntrezGene: | Pla2g2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.46e-26 | 9 |
epithelial cell of alimentary canal | 8.46e-26 | 9 |
brush border epithelial cell | 1.70e-18 | 6 |
gut absorptive cell | 1.70e-18 | 6 |
enterocyte | 1.70e-18 | 6 |
columnar/cuboidal epithelial cell | 9.12e-16 | 7 |
epithelial cell | 1.85e-15 | 25 |
endo-epithelial cell | 7.19e-15 | 15 |
endodermal cell | 9.08e-11 | 20 |
M cell of gut | 1.70e-10 | 3 |
intestinal crypt stem cell | 6.83e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.49e-43 | 15 |
intestine | 1.33e-42 | 31 |
intestinal mucosa | 1.38e-37 | 13 |
wall of intestine | 1.38e-37 | 13 |
gastrointestinal system mucosa | 1.38e-37 | 13 |
gastrointestinal system | 3.51e-29 | 47 |
organ component layer | 4.93e-26 | 24 |
epithelium of mucosa | 8.46e-26 | 9 |
gastrointestinal system epithelium | 8.46e-26 | 9 |
intestinal epithelium | 8.46e-26 | 9 |
simple columnar epithelium | 7.82e-21 | 11 |
small intestine | 2.05e-13 | 4 |
digestive system | 2.14e-11 | 116 |
digestive tract | 2.14e-11 | 116 |
primitive gut | 2.14e-11 | 116 |
endoderm-derived structure | 4.06e-11 | 118 |
endoderm | 4.06e-11 | 118 |
presumptive endoderm | 4.06e-11 | 118 |
ileal mucosa | 6.63e-11 | 3 |
ileum | 6.63e-11 | 3 |
mucosa of small intestine | 6.63e-11 | 3 |
wall of small intestine | 6.63e-11 | 3 |
subdivision of digestive tract | 2.72e-09 | 114 |
gut-associated lymphoid tissue | 2.21e-07 | 2 |
mucosa-associated lymphoid tissue | 2.21e-07 | 2 |
lymphoid tissue | 2.21e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.