FFCP PHASE1:Mm9::chr4:116494106..116494126,-: Difference between revisions
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|id=chr4:116494106..116494126,- | |id=chr4:116494106..116494126,- | ||
|ontology_enrichment_celltype=CL:0002563!4.68e-07!9;CL:0002251!4.68e-07!9 | |ontology_enrichment_celltype=CL:0002563!4.68e-07!9;CL:0002251!4.68e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.64e-18,9;CL:0002251,6.64e-18,9;CL:0000239,9.70e-12,6;CL:0000677,9.70e-12,6;CL:0000584,9.70e-12,6;CL:0002076,5.31e-10,15;CL:0000075,5.88e-10,7;CL:0000066,6.99e-10,25;CL:0002250,8.91e-08,3;CL:0000682,2.76e-07,3;CL:0000223,4.68e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.54e-10!15;UBERON:0000160!9.16e-10!43;UBERON:0001242!6.07e-09!13;UBERON:0000060!6.07e-09!13;UBERON:0001262!6.07e-09!13;UBERON:0004786!6.07e-09!13;UBERON:0000485!1.60e-07!11;UBERON:0003350!4.68e-07!9;UBERON:0004808!4.68e-07!9;UBERON:0001277!4.68e-07!9 | |ontology_enrichment_uberon=UBERON:0000344!2.54e-10!15;UBERON:0000160!9.16e-10!43;UBERON:0001242!6.07e-09!13;UBERON:0000060!6.07e-09!13;UBERON:0001262!6.07e-09!13;UBERON:0004786!6.07e-09!13;UBERON:0000485!1.60e-07!11;UBERON:0003350!4.68e-07!9;UBERON:0004808!4.68e-07!9;UBERON:0001277!4.68e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.91e-26,15;UBERON:0001242,7.07e-22,13;UBERON:0001262,7.07e-22,13;UBERON:0004786,7.07e-22,13;UBERON:0003350,6.64e-18,9;UBERON:0004808,6.64e-18,9;UBERON:0001277,6.64e-18,9;UBERON:0000160,2.83e-16,31;UBERON:0004923,7.04e-15,24;UBERON:0000485,2.62e-14,11;UBERON:0005409,1.89e-10,47;UBERON:0000331,1.46e-07,3;UBERON:0002116,1.46e-07,3;UBERON:0001204,1.46e-07,3;UBERON:0001168,1.46e-07,3 | |||
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| ||
|short_description=p1@Hpdl | |short_description=p1@Hpdl | ||
}} | }} |
Revision as of 01:56, 14 November 2012
Short description: | p1@Hpdl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hpdl_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 0bp_to_ENSMUST00000055436, NM_146256, uc008uho.1_5end |
EntrezGene: | Hpdl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.64e-18 | 9 |
epithelial cell of alimentary canal | 6.64e-18 | 9 |
brush border epithelial cell | 9.70e-12 | 6 |
gut absorptive cell | 9.70e-12 | 6 |
enterocyte | 9.70e-12 | 6 |
endo-epithelial cell | 5.31e-10 | 15 |
columnar/cuboidal epithelial cell | 5.88e-10 | 7 |
epithelial cell | 6.99e-10 | 25 |
intestinal crypt stem cell | 8.91e-08 | 3 |
M cell of gut | 2.76e-07 | 3 |
endodermal cell | 4.68e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.91e-26 | 15 |
intestinal mucosa | 7.07e-22 | 13 |
wall of intestine | 7.07e-22 | 13 |
gastrointestinal system mucosa | 7.07e-22 | 13 |
epithelium of mucosa | 6.64e-18 | 9 |
gastrointestinal system epithelium | 6.64e-18 | 9 |
intestinal epithelium | 6.64e-18 | 9 |
intestine | 2.83e-16 | 31 |
organ component layer | 7.04e-15 | 24 |
simple columnar epithelium | 2.62e-14 | 11 |
gastrointestinal system | 1.89e-10 | 47 |
ileal mucosa | 1.46e-07 | 3 |
ileum | 1.46e-07 | 3 |
mucosa of small intestine | 1.46e-07 | 3 |
wall of small intestine | 1.46e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.