FFCP PHASE1:Mm9::chr6:48995364..48995370,+: Difference between revisions
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|id=chr6:48995364..48995370,+ | |id=chr6:48995364..48995370,+ | ||
|ontology_enrichment_celltype=CL:0002092!1.49e-13!3;CL:0002540!1.49e-13!3;CL:0002453!1.74e-12!8;CL:0000128!6.69e-11!6;CL:0000126!6.69e-11!6;CL:0000127!6.69e-11!6;CL:0002194!5.25e-10!4;CL:0000766!5.25e-10!4;CL:0000576!5.25e-10!4;CL:0000235!5.25e-10!4;CL:0002009!5.25e-10!4;CL:0000040!5.25e-10!4;CL:0000559!5.25e-10!4;CL:0000333!6.08e-10!10;CL:0000095!6.08e-10!10;CL:0000243!6.08e-10!10;CL:0000123!6.08e-10!10;CL:0000125!6.08e-10!10;CL:0000030!6.08e-10!10;CL:0000339!6.08e-10!10;CL:0002604!5.02e-09!2;CL:0002605!5.02e-09!2;CL:0000219!2.56e-07!54 | |ontology_enrichment_celltype=CL:0002092!1.49e-13!3;CL:0002540!1.49e-13!3;CL:0002453!1.74e-12!8;CL:0000128!6.69e-11!6;CL:0000126!6.69e-11!6;CL:0000127!6.69e-11!6;CL:0002194!5.25e-10!4;CL:0000766!5.25e-10!4;CL:0000576!5.25e-10!4;CL:0000235!5.25e-10!4;CL:0002009!5.25e-10!4;CL:0000040!5.25e-10!4;CL:0000559!5.25e-10!4;CL:0000333!6.08e-10!10;CL:0000095!6.08e-10!10;CL:0000243!6.08e-10!10;CL:0000123!6.08e-10!10;CL:0000125!6.08e-10!10;CL:0000030!6.08e-10!10;CL:0000339!6.08e-10!10;CL:0002604!5.02e-09!2;CL:0002605!5.02e-09!2;CL:0000219!2.56e-07!54 | ||
|ontology_enrichment_celltype_v019_2=CL:0002092,1.18e-44,3;CL:0002540,1.18e-44,3;CL:0002194,9.22e-33,4;CL:0000766,9.22e-33,4;CL:0000234,9.22e-33,4;CL:0000576,9.22e-33,4;CL:0000235,9.22e-33,4;CL:0000864,9.22e-33,4;CL:0002009,9.22e-33,4;CL:0000040,9.22e-33,4;CL:0000559,9.22e-33,4;CL:0002476,1.31e-29,2;CL:0000473,4.01e-19,7;CL:0000557,4.01e-19,7;CL:0002320,8.56e-12,46;CL:0000134,8.56e-12,46;CL:0000839,1.14e-10,13;CL:0000219,4.19e-10,54;CL:0000763,8.35e-09,16;CL:0000878,2.13e-08,2;CL:0000129,2.13e-08,2;CL:0000738,2.50e-08,17;CL:0002087,2.50e-08,17;CL:0000049,1.60e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.71e-09!16;UBERON:0002204!3.82e-07!32 | |ontology_enrichment_uberon=UBERON:0002371!4.71e-09!16;UBERON:0002204!3.82e-07!32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.06e-33,16;UBERON:0001474,3.96e-24,22;UBERON:0004765,3.96e-24,22;UBERON:0001434,3.96e-24,22;UBERON:0002204,9.31e-17,32;UBERON:0002390,4.78e-12,45;UBERON:0003061,4.78e-12,45;UBERON:0002384,8.56e-12,46;UBERON:0002193,2.55e-11,48;UBERON:0002405,2.55e-11,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.219686182734472,0.58328969722285,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,10.7987966073768,30.6548572395762,18.4724829885986,1.19840044207362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52373851817817,5.4390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.219686182734472,0.58328969722285,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,10.7987966073768,30.6548572395762,18.4724829885986,1.19840044207362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52373851817817,5.4390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:48995364..48995370,+ | |short_description=p@chr6:48995364..48995370,+ | ||
}} | }} | ||
Revision as of 01:19, 15 November 2012
| Short description: | p@chr6:48995364..48995370, + |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr6:48995364..48995370, + |
| Coexpression cluster: | MCL_coexpression_mm9:38 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| bone marrow cell | 1.18e-44 | 3 |
| mesenchymal stem cell of the bone marrow | 1.18e-44 | 3 |
| monopoietic cell | 9.22e-33 | 4 |
| myeloid leukocyte | 9.22e-33 | 4 |
| phagocyte | 9.22e-33 | 4 |
| monocyte | 9.22e-33 | 4 |
| macrophage | 9.22e-33 | 4 |
| tissue-resident macrophage | 9.22e-33 | 4 |
| macrophage dendritic cell progenitor | 9.22e-33 | 4 |
| monoblast | 9.22e-33 | 4 |
| promonocyte | 9.22e-33 | 4 |
| bone marrow macrophage | 1.31e-29 | 2 |
| defensive cell | 4.01e-19 | 7 |
| granulocyte monocyte progenitor cell | 4.01e-19 | 7 |
| connective tissue cell | 8.56e-12 | 46 |
| mesenchymal cell | 8.56e-12 | 46 |
| myeloid lineage restricted progenitor cell | 1.14e-10 | 13 |
| motile cell | 4.19e-10 | 54 |
| myeloid cell | 8.35e-09 | 16 |
| central nervous system macrophage | 2.13e-08 | 2 |
| microglial cell | 2.13e-08 | 2 |
| leukocyte | 2.50e-08 | 17 |
| nongranular leukocyte | 2.50e-08 | 17 |
| common myeloid progenitor | 1.60e-07 | 19 |
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 6.06e-33 | 16 |
| bone element | 3.96e-24 | 22 |
| skeletal element | 3.96e-24 | 22 |
| skeletal system | 3.96e-24 | 22 |
| musculoskeletal system | 9.31e-17 | 32 |
| hematopoietic system | 4.78e-12 | 45 |
| blood island | 4.78e-12 | 45 |
| connective tissue | 8.56e-12 | 46 |
| hemolymphoid system | 2.55e-11 | 48 |
| immune system | 2.55e-11 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
