FFCP PHASE1:Mm9::chr6:72471704..72471733,-: Difference between revisions
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|id=chr6:72471704..72471733,- | |id=chr6:72471704..72471733,- | ||
|ontology_enrichment_celltype=CL:0002250!6.92e-09!3;CL:0000473!1.59e-08!3;CL:0000627!1.59e-08!3;CL:0000682!1.59e-08!3;CL:0002563!1.10e-07!9;CL:0002251!1.10e-07!9 | |ontology_enrichment_celltype=CL:0002250!6.92e-09!3;CL:0000473!1.59e-08!3;CL:0000627!1.59e-08!3;CL:0000682!1.59e-08!3;CL:0002563!1.10e-07!9;CL:0002251!1.10e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,2.28e-15,3;CL:0000682,1.09e-14,3;CL:0002563,4.55e-14,9;CL:0002251,4.55e-14,9;CL:0000066,9.99e-12,25;CL:0002076,2.22e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.25e-15!59;UBERON:0000344!1.04e-13!15;UBERON:0000160!2.38e-12!43;UBERON:0001007!6.05e-11!128;UBERON:0001555!6.05e-11!128;UBERON:0007026!6.05e-11!128;UBERON:0004119!1.12e-10!130;UBERON:0000925!1.12e-10!130;UBERON:0006595!1.12e-10!130;UBERON:0001242!1.14e-09!13;UBERON:0000060!1.14e-09!13;UBERON:0001262!1.14e-09!13;UBERON:0004786!1.14e-09!13;UBERON:0004921!4.80e-09!126;UBERON:0004185!4.80e-09!126;UBERON:0004923!6.70e-08!24;UBERON:0003350!1.10e-07!9;UBERON:0004808!1.10e-07!9;UBERON:0001277!1.10e-07!9 | |ontology_enrichment_uberon=UBERON:0005409!5.25e-15!59;UBERON:0000344!1.04e-13!15;UBERON:0000160!2.38e-12!43;UBERON:0001007!6.05e-11!128;UBERON:0001555!6.05e-11!128;UBERON:0007026!6.05e-11!128;UBERON:0004119!1.12e-10!130;UBERON:0000925!1.12e-10!130;UBERON:0006595!1.12e-10!130;UBERON:0001242!1.14e-09!13;UBERON:0000060!1.14e-09!13;UBERON:0001262!1.14e-09!13;UBERON:0004786!1.14e-09!13;UBERON:0004921!4.80e-09!126;UBERON:0004185!4.80e-09!126;UBERON:0004923!6.70e-08!24;UBERON:0003350!1.10e-07!9;UBERON:0004808!1.10e-07!9;UBERON:0001277!1.10e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.44e-21,31;UBERON:0000344,5.84e-21,15;UBERON:0005409,4.74e-16,47;UBERON:0003350,4.55e-14,9;UBERON:0004808,4.55e-14,9;UBERON:0001277,4.55e-14,9;UBERON:0001242,8.41e-14,13;UBERON:0001262,8.41e-14,13;UBERON:0004786,8.41e-14,13;UBERON:0004923,9.54e-13,24;UBERON:0000485,1.73e-11,11;UBERON:0001962,2.76e-11,2;UBERON:0001961,2.76e-11,2;UBERON:0001744,2.76e-11,2;UBERON:0001155,1.22e-10,2;UBERON:0000059,1.22e-10,2;UBERON:0002465,8.36e-08,3;UBERON:0001007,1.55e-07,116;UBERON:0001555,1.55e-07,116;UBERON:0007026,1.55e-07,116;UBERON:0004119,2.29e-07,118;UBERON:0000925,2.29e-07,118;UBERON:0006595,2.29e-07,118 | |||
|phase1_expression=0,0,0,0,0,22.1600638923695,20.3242997318107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,5.43974237497583,3.89995777814189,1.72269589234506,1.29228598847722,2.15471232685889,0,0,0.665191531965914,0,0,0,3.75507105676657,1.66234645358492,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,0.793351699990633,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,2.69645822596266,1.72910439899755,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0,0,0.209088296014469,0,0,0.247960367176008,0.785267825952089,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0,0.201652370273681,0.38983152295901,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,22.1600638923695,20.3242997318107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,5.43974237497583,3.89995777814189,1.72269589234506,1.29228598847722,2.15471232685889,0,0,0.665191531965914,0,0,0,3.75507105676657,1.66234645358492,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,0.793351699990633,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,2.69645822596266,1.72910439899755,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0,0,0.209088296014469,0,0,0.247960367176008,0.785267825952089,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0,0.201652370273681,0.38983152295901,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Sh2d6 | |short_description=p2@Sh2d6 | ||
}} | }} |
Revision as of 21:40, 14 November 2012
Short description: | p2@Sh2d6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sh2d6_5end |
Coexpression cluster: | MCL_coexpression_mm9:331 |
Association with transcript: | -76bp_to_ENSMUST00000160761_5end |
EntrezGene: | Sh2d6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 2.28e-15 | 3 |
M cell of gut | 1.09e-14 | 3 |
intestinal epithelial cell | 4.55e-14 | 9 |
epithelial cell of alimentary canal | 4.55e-14 | 9 |
epithelial cell | 9.99e-12 | 25 |
endo-epithelial cell | 2.22e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.44e-21 | 31 |
mucosa | 5.84e-21 | 15 |
gastrointestinal system | 4.74e-16 | 47 |
epithelium of mucosa | 4.55e-14 | 9 |
gastrointestinal system epithelium | 4.55e-14 | 9 |
intestinal epithelium | 4.55e-14 | 9 |
intestinal mucosa | 8.41e-14 | 13 |
wall of intestine | 8.41e-14 | 13 |
gastrointestinal system mucosa | 8.41e-14 | 13 |
organ component layer | 9.54e-13 | 24 |
simple columnar epithelium | 1.73e-11 | 11 |
gut-associated lymphoid tissue | 2.76e-11 | 2 |
mucosa-associated lymphoid tissue | 2.76e-11 | 2 |
lymphoid tissue | 2.76e-11 | 2 |
colon | 1.22e-10 | 2 |
large intestine | 1.22e-10 | 2 |
lymphoid system | 8.36e-08 | 3 |
digestive system | 1.55e-07 | 116 |
digestive tract | 1.55e-07 | 116 |
primitive gut | 1.55e-07 | 116 |
endoderm-derived structure | 2.29e-07 | 118 |
endoderm | 2.29e-07 | 118 |
presumptive endoderm | 2.29e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.