FFCP PHASE1:Mm9::chr6:144996125..144996134,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12035|HGNC=|MCL_coexpression_id=53|UniProt=B2KFA9|association_with_transcript=46bp_to_ENSMUST00000149769_5end|description=CAGE_peak_20_at_Bcat1_5end|id=chr6:144996125..144996134,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!9.86e-16!63;UBERON:0002346!1.79e-15!71;UBERON:0003075!1.79e-15!71;UBERON:0007284!1.79e-15!71;UBERON:0000970!1.76e-14!9;UBERON:0000019!1.76e-14!9;UBERON:0000047!1.76e-14!9;UBERON:0004088!1.76e-14!9;UBERON:0002104!1.76e-14!9;UBERON:0001456!1.76e-14!9;UBERON:0003072!1.76e-14!9;UBERON:0003071!1.76e-14!9;UBERON:0004128!1.76e-14!9;UBERON:0004121!2.99e-12!102;UBERON:0000924!2.99e-12!102;UBERON:0006601!2.99e-12!102;UBERON:0003056!6.19e-12!49;UBERON:0001444!1.98e-11!11;UBERON:0000020!2.74e-10!12;UBERON:0001032!2.74e-10!12;UBERON:0004456!2.74e-10!12;UBERON:0001049!2.11e-09!52;UBERON:0005068!2.11e-09!52;UBERON:0006241!2.11e-09!52;UBERON:0007135!2.11e-09!52;UBERON:0005085!2.52e-09!13;UBERON:0007811!2.87e-09!86;UBERON:0000153!3.09e-09!94;UBERON:0002616!5.37e-09!49;UBERON:0000955!1.05e-08!50;UBERON:0006238!1.05e-08!50;UBERON:0000073!2.09e-08!75;UBERON:0001016!2.09e-08!75;UBERON:0001017!5.40e-08!73;UBERON:0005743!5.40e-08!73;UBERON:0003076!1.31e-07!12;UBERON:0003057!1.31e-07!12;UBERON:0004733!7.16e-07!6;UBERON:0004732!7.16e-07!6;UBERON:0002028!7.16e-07!6;UBERON:0007277!7.16e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000970,6.67e-23,9;UBERON:0000019,6.67e-23,9;UBERON:0000047,6.67e-23,9;UBERON:0010312,6.67e-23,9;UBERON:0004088,6.67e-23,9;UBERON:0002104,6.67e-23,9;UBERON:0001456,6.67e-23,9;UBERON:0003072,6.67e-23,9;UBERON:0004128,6.67e-23,9;UBERON:0003071,6.67e-23,9;UBERON:0001444,7.50e-19,11;UBERON:0000020,2.49e-17,12;UBERON:0001032,2.49e-17,12;UBERON:0004456,2.49e-17,12;UBERON:0000033,4.85e-16,13;UBERON:0005085,4.85e-16,13;UBERON:0006834,8.69e-14,1;UBERON:0005795,2.39e-13,4;UBERON:0000995,2.39e-13,4;UBERON:0003975,7.03e-11,5;UBERON:0001896,2.35e-07,2;UBERON:0002298,2.35e-07,2;UBERON:0005290,2.35e-07,2;UBERON:0010096,2.35e-07,2;UBERON:0003134,3.77e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0,0.210324961351382,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.307213066512487,0.263772575460388,0.182975287204819,0,0,0,0,0.294628585473668,0,0.372798891650601,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0,0.324482526135515,0,0,0,0.631325567659422,0.130120442962704,0.229902104433473,0.720248519221397,0.90422890701429,1.7009124787832,2.3060469651273,2.24884138943349,1.29351685369508,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295220295959204,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.17211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.709700426041343,0.534196811001766,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50145980360946,1.28206136987086,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p20@Bcat1}} | ||
|EntrezGene=12035 | |||
|HGNC= | |||
|MCL_coexpression_id=53 | |||
|UniProt=B2KFA9 | |||
|association_with_transcript=46bp_to_ENSMUST00000149769_5end | |||
|description=CAGE_peak_20_at_Bcat1_5end | |||
|id=chr6:144996125..144996134,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.86e-16!63;UBERON:0002346!1.79e-15!71;UBERON:0003075!1.79e-15!71;UBERON:0007284!1.79e-15!71;UBERON:0000970!1.76e-14!9;UBERON:0000019!1.76e-14!9;UBERON:0000047!1.76e-14!9;UBERON:0004088!1.76e-14!9;UBERON:0002104!1.76e-14!9;UBERON:0001456!1.76e-14!9;UBERON:0003072!1.76e-14!9;UBERON:0003071!1.76e-14!9;UBERON:0004128!1.76e-14!9;UBERON:0004121!2.99e-12!102;UBERON:0000924!2.99e-12!102;UBERON:0006601!2.99e-12!102;UBERON:0003056!6.19e-12!49;UBERON:0001444!1.98e-11!11;UBERON:0000020!2.74e-10!12;UBERON:0001032!2.74e-10!12;UBERON:0004456!2.74e-10!12;UBERON:0001049!2.11e-09!52;UBERON:0005068!2.11e-09!52;UBERON:0006241!2.11e-09!52;UBERON:0007135!2.11e-09!52;UBERON:0005085!2.52e-09!13;UBERON:0007811!2.87e-09!86;UBERON:0000153!3.09e-09!94;UBERON:0002616!5.37e-09!49;UBERON:0000955!1.05e-08!50;UBERON:0006238!1.05e-08!50;UBERON:0000073!2.09e-08!75;UBERON:0001016!2.09e-08!75;UBERON:0001017!5.40e-08!73;UBERON:0005743!5.40e-08!73;UBERON:0003076!1.31e-07!12;UBERON:0003057!1.31e-07!12;UBERON:0004733!7.16e-07!6;UBERON:0004732!7.16e-07!6;UBERON:0002028!7.16e-07!6;UBERON:0007277!7.16e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,6.67e-23,9;UBERON:0000019,6.67e-23,9;UBERON:0000047,6.67e-23,9;UBERON:0010312,6.67e-23,9;UBERON:0004088,6.67e-23,9;UBERON:0002104,6.67e-23,9;UBERON:0001456,6.67e-23,9;UBERON:0003072,6.67e-23,9;UBERON:0004128,6.67e-23,9;UBERON:0003071,6.67e-23,9;UBERON:0001444,7.50e-19,11;UBERON:0000020,2.49e-17,12;UBERON:0001032,2.49e-17,12;UBERON:0004456,2.49e-17,12;UBERON:0000033,4.85e-16,13;UBERON:0005085,4.85e-16,13;UBERON:0006834,8.69e-14,1;UBERON:0005795,2.39e-13,4;UBERON:0000995,2.39e-13,4;UBERON:0003975,7.03e-11,5;UBERON:0001896,2.35e-07,2;UBERON:0002298,2.35e-07,2;UBERON:0005290,2.35e-07,2;UBERON:0010096,2.35e-07,2;UBERON:0003134,3.77e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0,0.210324961351382,0,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.307213066512487,0.263772575460388,0.182975287204819,0,0,0,0,0.294628585473668,0,0.372798891650601,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0,0.324482526135515,0,0,0,0.631325567659422,0.130120442962704,0.229902104433473,0.720248519221397,0.90422890701429,1.7009124787832,2.3060469651273,2.24884138943349,1.29351685369508,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295220295959204,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.17211686592203,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.709700426041343,0.534196811001766,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50145980360946,1.28206136987086,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p20@Bcat1 | |||
}} |
Revision as of 09:20, 14 September 2013
Short description: | p20@Bcat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_Bcat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 46bp_to_ENSMUST00000149769_5end |
EntrezGene: | Bcat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 6.67e-23 | 9 |
camera-type eye | 6.67e-23 | 9 |
simple eye | 6.67e-23 | 9 |
immature eye | 6.67e-23 | 9 |
ocular region | 6.67e-23 | 9 |
visual system | 6.67e-23 | 9 |
face | 6.67e-23 | 9 |
optic cup | 6.67e-23 | 9 |
optic vesicle | 6.67e-23 | 9 |
eye primordium | 6.67e-23 | 9 |
subdivision of head | 7.50e-19 | 11 |
sense organ | 2.49e-17 | 12 |
sensory system | 2.49e-17 | 12 |
entire sense organ system | 2.49e-17 | 12 |
head | 4.85e-16 | 13 |
ectodermal placode | 4.85e-16 | 13 |
uterus or analog | 8.69e-14 | 1 |
embryonic uterus | 2.39e-13 | 4 |
uterus | 2.39e-13 | 4 |
internal female genitalia | 7.03e-11 | 5 |
medulla oblongata | 2.35e-07 | 2 |
brainstem | 2.35e-07 | 2 |
myelencephalon | 2.35e-07 | 2 |
future myelencephalon | 2.35e-07 | 2 |
female reproductive organ | 3.77e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.