FFCP PHASE1:Mm9::chr10:34618028..34618035,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=550|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:34618028..34618035,+|id=chr10:34618028..34618035,+|ontology_enrichment_celltype=CL:0002563!1.71e-23!9;CL:0002251!1.71e-23!9;CL:0000066!2.05e-21!25;CL:0002076!9.09e-20!15;CL:0000223!5.05e-17!20;CL:0000239!8.73e-17!6;CL:0000677!8.73e-17!6;CL:0000212!8.73e-17!6;CL:0000584!8.73e-17!6;CL:0000075!2.79e-14!7;CL:0000473!2.75e-09!3;CL:0000627!2.75e-09!3;CL:0000682!2.75e-09!3;CL:0002250!2.71e-08!3;CL:0000063!4.18e-07!66|ontology_enrichment_celltype_v019_2=CL:0002563,9.24e-31,9;CL:0002251,9.24e-31,9;CL:0000239,5.96e-27,6;CL:0000677,5.96e-27,6;CL:0000584,5.96e-27,6;CL:0000066,7.49e-24,25;CL:0000075,4.76e-23,7;CL:0002076,4.38e-18,15;CL:0000223,1.07e-16,20;CL:0000682,1.96e-14,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.05e-38!15;UBERON:0001242!3.58e-33!13;UBERON:0000060!3.58e-33!13;UBERON:0001262!3.58e-33!13;UBERON:0004786!3.58e-33!13;UBERON:0003350!1.71e-23!9;UBERON:0004808!1.71e-23!9;UBERON:0001277!1.71e-23!9;UBERON:0004923!7.16e-23!24;UBERON:0000485!6.57e-19!11;UBERON:0000160!6.08e-18!43;UBERON:0005409!2.63e-13!59;UBERON:0001007!2.10e-10!128;UBERON:0001555!2.10e-10!128;UBERON:0007026!2.10e-10!128;UBERON:0004119!3.77e-10!130;UBERON:0000925!3.77e-10!130;UBERON:0006595!3.77e-10!130;UBERON:0000331!6.91e-09!3;UBERON:0002116!6.91e-09!3;UBERON:0001204!6.91e-09!3;UBERON:0001168!6.91e-09!3;UBERON:0004921!1.64e-08!126;UBERON:0004185!1.64e-08!126;UBERON:0001962!5.54e-07!2;UBERON:0001961!5.54e-07!2;UBERON:0001744!5.54e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.57e-48,15;UBERON:0001242,1.34e-39,13;UBERON:0001262,1.34e-39,13;UBERON:0004786,1.34e-39,13;UBERON:0003350,9.24e-31,9;UBERON:0004808,9.24e-31,9;UBERON:0001277,9.24e-31,9;UBERON:0004923,1.34e-29,24;UBERON:0000485,5.28e-25,11;UBERON:0000160,1.18e-15,31;UBERON:0000331,9.11e-14,3;UBERON:0002116,9.11e-14,3;UBERON:0001204,9.11e-14,3;UBERON:0001168,9.11e-14,3;UBERON:0001962,1.32e-10,2;UBERON:0001961,1.32e-10,2;UBERON:0001744,1.32e-10,2;UBERON:0002108,1.85e-10,4;UBERON:0005409,9.66e-10,47;UBERON:0003929,1.16e-09,55;UBERON:0001007,1.84e-08,116;UBERON:0001555,1.84e-08,116;UBERON:0007026,1.84e-08,116;UBERON:0004119,2.85e-08,118;UBERON:0000925,2.85e-08,118;UBERON:0006595,2.85e-08,118;UBERON:0000490,9.94e-08,66;UBERON:0002465,2.44e-07,3;UBERON:0005911,2.62e-07,69|phase1_expression=0,3.83872948403297,2.72999543633722,47.7893453864791,31.0555352566735,1.51091344720701,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.1979541542198,15.1410125504332,6.31655160526522,8.18447792702242,4.52489588640367,6.65081968097309,2.01624103807945,1.33038306393183,0,0,0,1.1554064790051,1.66234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0459342777394,0,0,1.29955283489534,0,0,0,0,0,0,0,0,0,0,0.506719730950197,0.505524445014783,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.864552199498777,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4351793081753,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:34618028..34618035,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=550 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:34618028..34618035,+ | |||
|id=chr10:34618028..34618035,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.71e-23!9;CL:0002251!1.71e-23!9;CL:0000066!2.05e-21!25;CL:0002076!9.09e-20!15;CL:0000223!5.05e-17!20;CL:0000239!8.73e-17!6;CL:0000677!8.73e-17!6;CL:0000212!8.73e-17!6;CL:0000584!8.73e-17!6;CL:0000075!2.79e-14!7;CL:0000473!2.75e-09!3;CL:0000627!2.75e-09!3;CL:0000682!2.75e-09!3;CL:0002250!2.71e-08!3;CL:0000063!4.18e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.24e-31,9;CL:0002251,9.24e-31,9;CL:0000239,5.96e-27,6;CL:0000677,5.96e-27,6;CL:0000584,5.96e-27,6;CL:0000066,7.49e-24,25;CL:0000075,4.76e-23,7;CL:0002076,4.38e-18,15;CL:0000223,1.07e-16,20;CL:0000682,1.96e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.05e-38!15;UBERON:0001242!3.58e-33!13;UBERON:0000060!3.58e-33!13;UBERON:0001262!3.58e-33!13;UBERON:0004786!3.58e-33!13;UBERON:0003350!1.71e-23!9;UBERON:0004808!1.71e-23!9;UBERON:0001277!1.71e-23!9;UBERON:0004923!7.16e-23!24;UBERON:0000485!6.57e-19!11;UBERON:0000160!6.08e-18!43;UBERON:0005409!2.63e-13!59;UBERON:0001007!2.10e-10!128;UBERON:0001555!2.10e-10!128;UBERON:0007026!2.10e-10!128;UBERON:0004119!3.77e-10!130;UBERON:0000925!3.77e-10!130;UBERON:0006595!3.77e-10!130;UBERON:0000331!6.91e-09!3;UBERON:0002116!6.91e-09!3;UBERON:0001204!6.91e-09!3;UBERON:0001168!6.91e-09!3;UBERON:0004921!1.64e-08!126;UBERON:0004185!1.64e-08!126;UBERON:0001962!5.54e-07!2;UBERON:0001961!5.54e-07!2;UBERON:0001744!5.54e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.57e-48,15;UBERON:0001242,1.34e-39,13;UBERON:0001262,1.34e-39,13;UBERON:0004786,1.34e-39,13;UBERON:0003350,9.24e-31,9;UBERON:0004808,9.24e-31,9;UBERON:0001277,9.24e-31,9;UBERON:0004923,1.34e-29,24;UBERON:0000485,5.28e-25,11;UBERON:0000160,1.18e-15,31;UBERON:0000331,9.11e-14,3;UBERON:0002116,9.11e-14,3;UBERON:0001204,9.11e-14,3;UBERON:0001168,9.11e-14,3;UBERON:0001962,1.32e-10,2;UBERON:0001961,1.32e-10,2;UBERON:0001744,1.32e-10,2;UBERON:0002108,1.85e-10,4;UBERON:0005409,9.66e-10,47;UBERON:0003929,1.16e-09,55;UBERON:0001007,1.84e-08,116;UBERON:0001555,1.84e-08,116;UBERON:0007026,1.84e-08,116;UBERON:0004119,2.85e-08,118;UBERON:0000925,2.85e-08,118;UBERON:0006595,2.85e-08,118;UBERON:0000490,9.94e-08,66;UBERON:0002465,2.44e-07,3;UBERON:0005911,2.62e-07,69 | |||
|phase1_expression=0,3.83872948403297,2.72999543633722,47.7893453864791,31.0555352566735,1.51091344720701,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.1979541542198,15.1410125504332,6.31655160526522,8.18447792702242,4.52489588640367,6.65081968097309,2.01624103807945,1.33038306393183,0,0,0,1.1554064790051,1.66234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0459342777394,0,0,1.29955283489534,0,0,0,0,0,0,0,0,0,0,0.506719730950197,0.505524445014783,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.864552199498777,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4351793081753,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:34618028..34618035,+ | |||
}} |
Revision as of 16:38, 12 September 2013
Short description: | p@chr10:34618028..34618035, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:34618028..34618035, + |
Coexpression cluster: | MCL_coexpression_mm9:550 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.24e-31 | 9 |
epithelial cell of alimentary canal | 9.24e-31 | 9 |
brush border epithelial cell | 5.96e-27 | 6 |
gut absorptive cell | 5.96e-27 | 6 |
enterocyte | 5.96e-27 | 6 |
epithelial cell | 7.49e-24 | 25 |
columnar/cuboidal epithelial cell | 4.76e-23 | 7 |
endo-epithelial cell | 4.38e-18 | 15 |
endodermal cell | 1.07e-16 | 20 |
M cell of gut | 1.96e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.57e-48 | 15 |
intestinal mucosa | 1.34e-39 | 13 |
wall of intestine | 1.34e-39 | 13 |
gastrointestinal system mucosa | 1.34e-39 | 13 |
epithelium of mucosa | 9.24e-31 | 9 |
gastrointestinal system epithelium | 9.24e-31 | 9 |
intestinal epithelium | 9.24e-31 | 9 |
organ component layer | 1.34e-29 | 24 |
simple columnar epithelium | 5.28e-25 | 11 |
intestine | 1.18e-15 | 31 |
ileal mucosa | 9.11e-14 | 3 |
ileum | 9.11e-14 | 3 |
mucosa of small intestine | 9.11e-14 | 3 |
wall of small intestine | 9.11e-14 | 3 |
gut-associated lymphoid tissue | 1.32e-10 | 2 |
mucosa-associated lymphoid tissue | 1.32e-10 | 2 |
lymphoid tissue | 1.32e-10 | 2 |
small intestine | 1.85e-10 | 4 |
gastrointestinal system | 9.66e-10 | 47 |
gut epithelium | 1.16e-09 | 55 |
digestive system | 1.84e-08 | 116 |
digestive tract | 1.84e-08 | 116 |
primitive gut | 1.84e-08 | 116 |
endoderm-derived structure | 2.85e-08 | 118 |
endoderm | 2.85e-08 | 118 |
presumptive endoderm | 2.85e-08 | 118 |
unilaminar epithelium | 9.94e-08 | 66 |
lymphoid system | 2.44e-07 | 3 |
endo-epithelium | 2.62e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.