FFCP PHASE1:Mm9::chr10:122063906..122063911,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2523|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:122063906..122063911,+|id=chr10:122063906..122063911,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!1.10e-10!14;UBERON:0003918!1.10e-10!14;UBERON:0005095!1.10e-10!14;UBERON:0007687!1.10e-10!14;UBERON:0005172!8.66e-10!49;UBERON:0005173!8.66e-10!49;UBERON:0002417!8.66e-10!49;UBERON:0000916!8.66e-10!49;UBERON:0006554!4.11e-09!16;UBERON:0001008!1.82e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.02e-08,22;UBERON:0007499,6.02e-08,22;UBERON:0006925,6.02e-08,22;UBERON:0009497,6.02e-08,22;UBERON:0000015,6.02e-08,22;UBERON:0002423,6.02e-08,22;UBERON:0006235,6.02e-08,22;UBERON:0008835,6.02e-08,22;UBERON:0003894,6.02e-08,22;UBERON:0004161,6.02e-08,22;UBERON:0008836,6.02e-08,22;UBERON:0009854,1.24e-07,23;UBERON:0009856,1.24e-07,23;UBERON:0001301,4.17e-07,3;UBERON:0006555,4.17e-07,3;UBERON:0005103,4.17e-07,3;UBERON:0000083,4.17e-07,3;UBERON:0009201,4.17e-07,3;UBERON:0004819,4.17e-07,3;UBERON:0006553,4.17e-07,3;UBERON:0003074,4.17e-07,3;UBERON:0003060,4.17e-07,3;UBERON:0002365,4.44e-07,25;UBERON:0002330,4.44e-07,25;UBERON:0005256,7.45e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0217820674694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.610953983535943,0.581857461502877,0.280543279561274,0.379419222745544,0.295220295959204,0.627994911365499,0.493588655687202,0,0,0,0,0,0.72353147925725,1.01850340712568,4.02774592431135,0.324270453550071,0.823684239564244,2.87536413054709,0.744281895337007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.448176066834085,0.34461281373368,0.476293691283074,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr10:122063906..122063911,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2523 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:122063906..122063911,+ | |||
|id=chr10:122063906..122063911,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.10e-10!14;UBERON:0003918!1.10e-10!14;UBERON:0005095!1.10e-10!14;UBERON:0007687!1.10e-10!14;UBERON:0005172!8.66e-10!49;UBERON:0005173!8.66e-10!49;UBERON:0002417!8.66e-10!49;UBERON:0000916!8.66e-10!49;UBERON:0006554!4.11e-09!16;UBERON:0001008!1.82e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.02e-08,22;UBERON:0007499,6.02e-08,22;UBERON:0006925,6.02e-08,22;UBERON:0009497,6.02e-08,22;UBERON:0000015,6.02e-08,22;UBERON:0002423,6.02e-08,22;UBERON:0006235,6.02e-08,22;UBERON:0008835,6.02e-08,22;UBERON:0003894,6.02e-08,22;UBERON:0004161,6.02e-08,22;UBERON:0008836,6.02e-08,22;UBERON:0009854,1.24e-07,23;UBERON:0009856,1.24e-07,23;UBERON:0001301,4.17e-07,3;UBERON:0006555,4.17e-07,3;UBERON:0005103,4.17e-07,3;UBERON:0000083,4.17e-07,3;UBERON:0009201,4.17e-07,3;UBERON:0004819,4.17e-07,3;UBERON:0006553,4.17e-07,3;UBERON:0003074,4.17e-07,3;UBERON:0003060,4.17e-07,3;UBERON:0002365,4.44e-07,25;UBERON:0002330,4.44e-07,25;UBERON:0005256,7.45e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0217820674694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.610953983535943,0.581857461502877,0.280543279561274,0.379419222745544,0.295220295959204,0.627994911365499,0.493588655687202,0,0,0,0,0,0.72353147925725,1.01850340712568,4.02774592431135,0.324270453550071,0.823684239564244,2.87536413054709,0.744281895337007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.448176066834085,0.34461281373368,0.476293691283074,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr10:122063906..122063911,+ | |||
}} |
Revision as of 15:55, 12 September 2013
Short description: | p@chr10:122063906..122063911, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:122063906..122063911, + |
Coexpression cluster: | MCL_coexpression_mm9:2523 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 6.02e-08 | 22 |
epithelial sac | 6.02e-08 | 22 |
digestive gland | 6.02e-08 | 22 |
epithelium of foregut-midgut junction | 6.02e-08 | 22 |
anatomical boundary | 6.02e-08 | 22 |
hepatobiliary system | 6.02e-08 | 22 |
foregut-midgut junction | 6.02e-08 | 22 |
hepatic diverticulum | 6.02e-08 | 22 |
liver primordium | 6.02e-08 | 22 |
septum transversum | 6.02e-08 | 22 |
liver bud | 6.02e-08 | 22 |
digestive tract diverticulum | 1.24e-07 | 23 |
sac | 1.24e-07 | 23 |
epididymis | 4.17e-07 | 3 |
excretory tube | 4.17e-07 | 3 |
mesonephric epithelium | 4.17e-07 | 3 |
mesonephric tubule | 4.17e-07 | 3 |
nephric duct | 4.17e-07 | 3 |
kidney epithelium | 4.17e-07 | 3 |
renal duct | 4.17e-07 | 3 |
mesonephric duct | 4.17e-07 | 3 |
pronephric duct | 4.17e-07 | 3 |
exocrine gland | 4.44e-07 | 25 |
exocrine system | 4.44e-07 | 25 |
trunk mesenchyme | 7.45e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.