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FFCP PHASE1:Mm9::chr3:116671630..116671686,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=114301|HGNC=|MCL_coexpression_id=1452|UniProt=Q3UVT7|association_with_transcript=89bp_to_ENSMUST00000119557_5end|description=CAGE_peak_1_at_Palmd_5end|id=chr3:116671630..116671686,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!5.06e-11!122;UBERON:0000468!1.15e-10!333;UBERON:0000025!2.19e-09!114;UBERON:0003914!2.84e-08!47;UBERON:0002365!5.60e-08!25;UBERON:0002330!5.60e-08!25;UBERON:0000479!8.38e-08!349;UBERON:0003102!1.78e-07!23;UBERON:0002107!5.82e-07!22;UBERON:0007499!5.82e-07!22;UBERON:0006925!5.82e-07!22;UBERON:0009497!5.82e-07!22;UBERON:0000015!5.82e-07!22;UBERON:0002423!5.82e-07!22;UBERON:0006235!5.82e-07!22;UBERON:0008835!5.82e-07!22;UBERON:0003894!5.82e-07!22;UBERON:0004161!5.82e-07!22;UBERON:0008836!5.82e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.10e-11,122;UBERON:0000025,1.44e-09,114;UBERON:0003914,1.67e-08,47;UBERON:0002365,4.47e-08,25;UBERON:0002330,4.47e-08,25;UBERON:0003102,1.17e-07,22;UBERON:0002107,4.81e-07,22;UBERON:0007499,4.81e-07,22;UBERON:0006925,4.81e-07,22;UBERON:0009497,4.81e-07,22;UBERON:0000015,4.81e-07,22;UBERON:0002423,4.81e-07,22;UBERON:0006235,4.81e-07,22;UBERON:0008835,4.81e-07,22;UBERON:0003894,4.81e-07,22;UBERON:0004161,4.81e-07,22;UBERON:0008836,4.81e-07,22|phase1_expression=7.52699581392532,1.04692622291808,0.454999239389536,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0,0,7.99406927420056,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.09843091367236,3.4997381833371,0.279972843250725,0,0,0,0,0.257259436035947,2.0057340795713,3.09403255366465,2.63011399117477,4.23192783417626,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,12.6501327016343,13.6355997715008,11.3575479129746,1.71390590642282,1.98781686856452,3.06226998037385,2.49198224647415,1.83843757322004,9.91042928994498,4.08599481872601,5.83704826373725,1.18697658957174,1.73826522844578,3.64639359389732,2.79182999001381,1.68828783009504,6.41752640662602,1.47314292736834,3.41692033917847,1.4911955666024,0.454357159999104,1.058001841495,39.7114349521299,21.5105969245347,45.5580793584193,29.1439723484421,24.6915038630114,45.2507155968309,20.7857741794993,0.340860645156116,0.519572009205738,0,3.94361575374705,0,0,0,2.16491041011214,3.54703811665138,4.04419556011827,25.2346374179123,5.95557132388495,13.8051189330287,3.64319186208885,5.78484408793068,4.38169444786511,4.82312449768392,9.17191915658498,14.2003248202533,0.741584903203122,179.88160000837,5.30766331169925,18.9267214438469,9.27534377533653,8.727754556434,0,4.39171195517321,2.72280718857492,0.766371165625774,0,0,0,4.94309110035915,8.6925114535539,4.02093926761166,11.4724051326902,8.43861009190091,9.3504620051802,8.4365456795234,3.66621709861139,8.9573018839267,10.3616330957807,44.6136734479325,2.08192708740326,4.82794419310293,8.82304436046211,7.9873553452929,8.02830689985669,9.60852902136373,7.02762934197966,19.9201595469042,1.72454394346274,10.5899404893979,12.6684809398043,12.9325482132269,16.6828349535359,28.5566776548177,28.3979348242962,1.59227413454795,0,0,0,4.76389276831654,8.91199027928165,6.30217215113552,14.678173606283,7.67380503814875,13.884040159864,11.39416329277,15.8281306825775,20.4339349142547,17.4433440908289,57.9511148199206,52.0461757284394,66.3747942911009,72.4515380460467,71.3978147805178,18.5055154736432,18.4199256158919,0.330418782983798,0.793351699990633,0.639864751605702,1.62565670302307,2.57734922644187,2.01683524623343,0.889512175379481,2.09248188723815,0.474529061544512,2.30578536613615,2.26201687920243,3.18330355265841,3.11942539390592,1.79763881730844,1.94524244887225,1.1948476395262,0.189667900953082,1.02823661348756,1.1270773567308,0.610953983535943,1.16371492300575,1.26244475802573,3.54124607895841,1.47610147979602,2.66897837330337,3.08492909804501,45.3572519443338,1.33476084572875,2.35870794135844,2.69834534861824,1.82574109249653,4.82354319504834,5.0925170356284,17.5494643844994,37.4532373850332,29.1035097979366,44.5681440234799,44.6569137202204,40.2528598317783,39.4023049597494,28.7035861635059,28.946611281802,23.0941487708256,2.27389694124582,4.23708938749267,2.71592137240301,2.81628297946203,8.5428191295326,11.9021820443007,10.1469496886055,18.128041572212,21.9250042752287,20.2507556195009,30.4785765371273,26.0754322617502,19.3829738499225,0,0,11.3105782794378,17.6599517635029,7.54587772942622,5.86058432961016,0,20.1976741763498,0,0.390438744296638,0.646270193198397,0.477937595905104,1.55959071857676,1.98153571552183,1.21443210502468,1.16902343164525,0.395287777946524,3.53453448063988,12.0649072427028,2.84904965867608,3.90928702448583,7.09371528781903,2.65490276679926,1.69946445308487,1.51161778482376,4.71512699389745,9.7449624650655,10.4527950300935,10.5955600198971,14.1778154496227,12.1209108650805,10.1131762539461,7.37930260024991,10.3135543248187,8.17055053809091,1.98067203434441,1.16422815404479,2.57204442037911,5.67488747655275,6.77801506887868,7.73380396829969,5.78483403317739,0.469343416127421,2.96564899209348,4.85162475720916,137.680021206136,49.4081145689471,39.6859046027266,42.2578097771103,56.300328612556,1.1659233465194,10.198391610578,0.341741761595705,5.77883230297023,6.66700298530962,0.941842285023455,0.27338845544205,0.228778173206523,0,0,0,7.63736494412091,0.632671987162271,3.86306987541013,4.86024033698106,4.39085421630384,8.29777742235475,7.41753905116514,11.7367907129977,9.42321391142507,2.07383957266869,130.481255748254,0.56369293868419,2.8408143748356,0.66183396182839,1.75006069509643,2.19571699912143,3.04121025883401,3.16864544343536,1.95306577265925,0.943734099831398,0.724752362478018,3.16833006883652,4.74016680942267,1.21635129174099,2.05421914329655,1.16928740680016,2.32734704367726,0.79472541912506,1.32214994471966,1.62458479892035,2.72609414859999,1.295515713135,1.31074040677893,1.26695244961678,0.577271049841977,1.5193997283604,55.775674369342,0,0,0,9.65947970160952,3.19060208267009,8.97442958909599,72.0277753705661,4.51414893631827,8.471277639256,16.5717085142584,12.0308057822273,10.6548973053086,4.7955776383945,5.2877572817279,9.45031500324528,9.00642406448441,8.60970577069989,10.8729665467882,3.32119512269365,5.1873233542134,7.85374586469017,16.0450433265074,9.4325923182592,14.3397936591011,27.3363475195987,25.1362769831451,29.2036480728552,30.3236654116557,32.6988296858409,25.0873034043481,24.721357972049,23.1130800181578,21.9977846099999,18.0991602687568,18.7732608030666,21.7987419123987,21.8405527425753,29.8813807872827,25.3723246765207,20.9421451268018,23.1283104248901,29.0692833264657,26.3506265162926,23.1844025623194,21.5855007989872,22.3609254722166,24.1731322645634,21.3234063229941,16.8461725736327,17.7308068276014,23.735400503842,20.9164735601054,16.5899685443782,14.7388240983388,22.92529762765,39.5362739448869,42.8485863834209,37.2799498311981,36.1713823567857|short_description=p1@Palmd}}
|EntrezGene=114301
|HGNC=
|MCL_coexpression_id=1452
|UniProt=Q3UVT7
|association_with_transcript=89bp_to_ENSMUST00000119557_5end
|description=CAGE_peak_1_at_Palmd_5end
|id=chr3:116671630..116671686,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!5.06e-11!122;UBERON:0000468!1.15e-10!333;UBERON:0000025!2.19e-09!114;UBERON:0003914!2.84e-08!47;UBERON:0002365!5.60e-08!25;UBERON:0002330!5.60e-08!25;UBERON:0000479!8.38e-08!349;UBERON:0003102!1.78e-07!23;UBERON:0002107!5.82e-07!22;UBERON:0007499!5.82e-07!22;UBERON:0006925!5.82e-07!22;UBERON:0009497!5.82e-07!22;UBERON:0000015!5.82e-07!22;UBERON:0002423!5.82e-07!22;UBERON:0006235!5.82e-07!22;UBERON:0008835!5.82e-07!22;UBERON:0003894!5.82e-07!22;UBERON:0004161!5.82e-07!22;UBERON:0008836!5.82e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.10e-11,122;UBERON:0000025,1.44e-09,114;UBERON:0003914,1.67e-08,47;UBERON:0002365,4.47e-08,25;UBERON:0002330,4.47e-08,25;UBERON:0003102,1.17e-07,22;UBERON:0002107,4.81e-07,22;UBERON:0007499,4.81e-07,22;UBERON:0006925,4.81e-07,22;UBERON:0009497,4.81e-07,22;UBERON:0000015,4.81e-07,22;UBERON:0002423,4.81e-07,22;UBERON:0006235,4.81e-07,22;UBERON:0008835,4.81e-07,22;UBERON:0003894,4.81e-07,22;UBERON:0004161,4.81e-07,22;UBERON:0008836,4.81e-07,22
|phase1_expression=7.52699581392532,1.04692622291808,0.454999239389536,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0,0,0,0,0,7.99406927420056,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.09843091367236,3.4997381833371,0.279972843250725,0,0,0,0,0.257259436035947,2.0057340795713,3.09403255366465,2.63011399117477,4.23192783417626,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,12.6501327016343,13.6355997715008,11.3575479129746,1.71390590642282,1.98781686856452,3.06226998037385,2.49198224647415,1.83843757322004,9.91042928994498,4.08599481872601,5.83704826373725,1.18697658957174,1.73826522844578,3.64639359389732,2.79182999001381,1.68828783009504,6.41752640662602,1.47314292736834,3.41692033917847,1.4911955666024,0.454357159999104,1.058001841495,39.7114349521299,21.5105969245347,45.5580793584193,29.1439723484421,24.6915038630114,45.2507155968309,20.7857741794993,0.340860645156116,0.519572009205738,0,3.94361575374705,0,0,0,2.16491041011214,3.54703811665138,4.04419556011827,25.2346374179123,5.95557132388495,13.8051189330287,3.64319186208885,5.78484408793068,4.38169444786511,4.82312449768392,9.17191915658498,14.2003248202533,0.741584903203122,179.88160000837,5.30766331169925,18.9267214438469,9.27534377533653,8.727754556434,0,4.39171195517321,2.72280718857492,0.766371165625774,0,0,0,4.94309110035915,8.6925114535539,4.02093926761166,11.4724051326902,8.43861009190091,9.3504620051802,8.4365456795234,3.66621709861139,8.9573018839267,10.3616330957807,44.6136734479325,2.08192708740326,4.82794419310293,8.82304436046211,7.9873553452929,8.02830689985669,9.60852902136373,7.02762934197966,19.9201595469042,1.72454394346274,10.5899404893979,12.6684809398043,12.9325482132269,16.6828349535359,28.5566776548177,28.3979348242962,1.59227413454795,0,0,0,4.76389276831654,8.91199027928165,6.30217215113552,14.678173606283,7.67380503814875,13.884040159864,11.39416329277,15.8281306825775,20.4339349142547,17.4433440908289,57.9511148199206,52.0461757284394,66.3747942911009,72.4515380460467,71.3978147805178,18.5055154736432,18.4199256158919,0.330418782983798,0.793351699990633,0.639864751605702,1.62565670302307,2.57734922644187,2.01683524623343,0.889512175379481,2.09248188723815,0.474529061544512,2.30578536613615,2.26201687920243,3.18330355265841,3.11942539390592,1.79763881730844,1.94524244887225,1.1948476395262,0.189667900953082,1.02823661348756,1.1270773567308,0.610953983535943,1.16371492300575,1.26244475802573,3.54124607895841,1.47610147979602,2.66897837330337,3.08492909804501,45.3572519443338,1.33476084572875,2.35870794135844,2.69834534861824,1.82574109249653,4.82354319504834,5.0925170356284,17.5494643844994,37.4532373850332,29.1035097979366,44.5681440234799,44.6569137202204,40.2528598317783,39.4023049597494,28.7035861635059,28.946611281802,23.0941487708256,2.27389694124582,4.23708938749267,2.71592137240301,2.81628297946203,8.5428191295326,11.9021820443007,10.1469496886055,18.128041572212,21.9250042752287,20.2507556195009,30.4785765371273,26.0754322617502,19.3829738499225,0,0,11.3105782794378,17.6599517635029,7.54587772942622,5.86058432961016,0,20.1976741763498,0,0.390438744296638,0.646270193198397,0.477937595905104,1.55959071857676,1.98153571552183,1.21443210502468,1.16902343164525,0.395287777946524,3.53453448063988,12.0649072427028,2.84904965867608,3.90928702448583,7.09371528781903,2.65490276679926,1.69946445308487,1.51161778482376,4.71512699389745,9.7449624650655,10.4527950300935,10.5955600198971,14.1778154496227,12.1209108650805,10.1131762539461,7.37930260024991,10.3135543248187,8.17055053809091,1.98067203434441,1.16422815404479,2.57204442037911,5.67488747655275,6.77801506887868,7.73380396829969,5.78483403317739,0.469343416127421,2.96564899209348,4.85162475720916,137.680021206136,49.4081145689471,39.6859046027266,42.2578097771103,56.300328612556,1.1659233465194,10.198391610578,0.341741761595705,5.77883230297023,6.66700298530962,0.941842285023455,0.27338845544205,0.228778173206523,0,0,0,7.63736494412091,0.632671987162271,3.86306987541013,4.86024033698106,4.39085421630384,8.29777742235475,7.41753905116514,11.7367907129977,9.42321391142507,2.07383957266869,130.481255748254,0.56369293868419,2.8408143748356,0.66183396182839,1.75006069509643,2.19571699912143,3.04121025883401,3.16864544343536,1.95306577265925,0.943734099831398,0.724752362478018,3.16833006883652,4.74016680942267,1.21635129174099,2.05421914329655,1.16928740680016,2.32734704367726,0.79472541912506,1.32214994471966,1.62458479892035,2.72609414859999,1.295515713135,1.31074040677893,1.26695244961678,0.577271049841977,1.5193997283604,55.775674369342,0,0,0,9.65947970160952,3.19060208267009,8.97442958909599,72.0277753705661,4.51414893631827,8.471277639256,16.5717085142584,12.0308057822273,10.6548973053086,4.7955776383945,5.2877572817279,9.45031500324528,9.00642406448441,8.60970577069989,10.8729665467882,3.32119512269365,5.1873233542134,7.85374586469017,16.0450433265074,9.4325923182592,14.3397936591011,27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|short_description=p1@Palmd
}}

Revision as of 01:20, 14 September 2013

Short description:p1@Palmd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Palmd_5end
Coexpression cluster:MCL_coexpression_mm9:1452
Association with transcript: 89bp_to_ENSMUST00000119557_5end
EntrezGene:Palmd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Palmd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.65
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G339.71
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C445.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C829.14
Mouse hepatocyte, donor6.CNhs13090.11822-124F424.69
Mouse hepatocyte, donor8.CNhs13091.11824-124F645.25
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B625.23
accessory axillary lymph node, adult.CNhs10475.1063-29H95.96
adrenal gland, adult.CNhs10508.49-24D713.81
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C19.17
adrenal gland, neonate N25.CNhs11223.1377-27I314.20
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H1179.88
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F518.93
bone (os femoris), neonate N16.CNhs11225.1525-43A69.28
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.94
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F14.02
cortex, adult.CNhs10473.12-14D511.47
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F29.35
diencephalon, neonate N30.CNhs11201.1388-42B28.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.96
epididymis, adult.CNhs10490.58-23B210.36
eyeball, adult.CNhs10484.31-12G444.61
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C98.82
eyeball, embryo E17.CNhs11023.1261-18D47.99
eyeball, neonate N00.CNhs11207.633-15C68.03
eyeball, neonate N01.CNhs11140.1532-43E79.61
eyeball, neonate N02.CNhs11205.1551-44G87.03
eyeball, neonate N16.CNhs11188.777-19A219.92
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H210.59
forelimb, embryo E13.CNhs10589.384-1E212.67
forelimb, embryo E14.CNhs10577.413-26A812.93
forelimb, embryo E15.CNhs11007.437-20E716.68
forelimb, embryo E17.CNhs10598.1517-43C428.56
forelimb, embryo E18.CNhs11008.1520-43B528.40
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.76
heart, embryo E12.CNhs11015.353-12F58.91
heart, embryo E13.CNhs11013.376-3I96.30
heart, embryo E14.CNhs10597.403-26D414.68
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C613.88
heart, embryo E17.CNhs11025.479-18E511.39
heart, embryo E18.CNhs11030.1283-20G315.83
heart, neonate N00.CNhs11213.639-21E320.43
heart, neonate N03.CNhs11221.1349-25I217.44
heart, neonate N10.CNhs11118.749-24G157.95
heart, neonate N16.CNhs11209.782-15G152.05
heart, neonate N20.CNhs11127.821-26I666.37
heart, neonate N25.CNhs11196.1351-25D372.45
heart, neonate N30.CNhs11202.1390-42D271.40
hippocampus, adult.CNhs10478.13-16E818.51
hippocampus, neonate N00.CNhs11228.627-43G118.42
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D53.54
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B245.36
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G417.55
liver, neonate N00.CNhs11117.641-24F437.45
liver, neonate N03.CNhs11123.1345-25G229.10
liver, neonate N06.CNhs11101.684-20A844.57
liver, neonate N07.CNhs11103.716-20H244.66
liver, neonate N10.CNhs11115.751-24B940.25
liver, neonate N20.CNhs11220.823-25A339.40
liver, neonate N25.CNhs11198.1368-26H128.70
liver, neonate N30.CNhs11106.1382-42D128.95
lung, adult.CNhs10474.28-22B123.09
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A68.54
lung, embryo E18.CNhs10583.1287-20I611.90
lung, neonate N00.CNhs11224.640-42C610.15
lung, neonate N06.CNhs11212.683-20E518.13
lung, neonate N07.CNhs11111.715-19A321.93
lung, neonate N10.CNhs11219.750-23E620.25
lung, neonate N20.CNhs11109.822-18A430.48
lung, neonate N25.CNhs11119.1359-25C726.08
lung, neonate N30.CNhs11133.1394-42H219.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B611.31
mammary gland, adult pregnant day19.CNhs10476.588-5H217.66
medulla oblongata, adult.CNhs10477.17-12C27.55
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C220.20
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I712.06
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G67.09
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G39.74
pancreas, embryo E18.CNhs10580.1535-43I710.45
pancreas, neonate N00.CNhs11105.645-26G910.60
pancreas, neonate N01.CNhs11138.1531-43D714.18
pancreas, neonate N02.CNhs11139.1539-43D812.12
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F66.78
pituitary gland, embryo E17.CNhs11039.1265-44F57.73
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F84.85
skin, adult.CNhs10492.30-1C3137.68
skin, neonate N00.CNhs11124.650-25G449.41
skin, neonate N03.CNhs11215.662-22H339.69
skin, neonate N06.CNhs11097.693-20I542.26
skin, neonate N10.CNhs11108.762-6C456.30
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C910.20
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C15.78
spleen, embryo E18.CNhs11011.1271-21F26.67
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D44.86
stomach, embryo E17.CNhs11006.1035-18D54.39
stomach, embryo E18.CNhs10999.1286-20C68.30
stomach, neonate N03.CNhs11193.1340-24B87.42
stomach, neonate N07.CNhs11210.718-18A911.74
stomach, neonate N25.CNhs11104.1355-25E49.42
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C1130.48
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B73.17
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C42.73
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B455.78
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E49.66
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E58.97
vagina, adult.CNhs10502.89-27D572.03
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I83.32
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H27.85
whole body, embryo E14.5.CNhs10578.420-27D216.05
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F214.34
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G527.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.14
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G529.20
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G530.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G532.70
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G525.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G524.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.77
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.80
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.84
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G529.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G525.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.94
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G523.13
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G529.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G526.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G524.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.73
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G523.74
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.92
whole body, embryo E17.5.CNhs10513.490-9F916.59
whole body, embryo E17.CNhs10517.475-3I514.74
whole body, embryo E18.CNhs10516.493-3B322.93
whole body, neonate N00.CNhs10525.657-19C239.54
whole body, neonate N01.CNhs10576.659-23C642.85
whole body, neonate N06.CNhs10515.692-21D137.28
whole body, neonate N10.CNhs10518.761-6B436.17





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit3.10e-11122
tube1.44e-09114
epithelial tube1.67e-0847
exocrine gland4.47e-0825
exocrine system4.47e-0825
surface structure1.17e-0722
liver4.81e-0722
epithelial sac4.81e-0722
digestive gland4.81e-0722
epithelium of foregut-midgut junction4.81e-0722
anatomical boundary4.81e-0722
hepatobiliary system4.81e-0722
foregut-midgut junction4.81e-0722
hepatic diverticulum4.81e-0722
liver primordium4.81e-0722
septum transversum4.81e-0722
liver bud4.81e-0722







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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