FFCP PHASE1:Mm9::chr10:127838274..127838290,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72002|HGNC=|MCL_coexpression_id=12|UniProt=Q9D856|association_with_transcript=0bp_to_ENSMUST00000042666,NM_001136237,uc007hmp.2_5end|description=CAGE_peak_1_at_Slc39a5_5end|id=chr10:127838274..127838290,-|ontology_enrichment_celltype=CL:0002563!3.82e-08!9;CL:0002251!3.82e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,5.67e-09,9;CL:0002251,5.67e-09,9;CL:0000239,9.19e-07,6;CL:0000677,9.19e-07,6;CL:0000584,9.19e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.03e-26!43;UBERON:0005409!2.40e-23!59;UBERON:0004119!2.01e-13!130;UBERON:0000925!2.01e-13!130;UBERON:0006595!2.01e-13!130;UBERON:0000344!3.84e-13!15;UBERON:0001007!6.28e-13!128;UBERON:0001555!6.28e-13!128;UBERON:0007026!6.28e-13!128;UBERON:0004921!7.99e-12!126;UBERON:0004185!7.99e-12!126;UBERON:0001242!1.33e-11!13;UBERON:0000060!1.33e-11!13;UBERON:0001262!1.33e-11!13;UBERON:0004786!1.33e-11!13;UBERON:0004923!7.77e-10!24;UBERON:0003350!3.82e-08!9;UBERON:0004808!3.82e-08!9;UBERON:0001277!3.82e-08!9;UBERON:0005172!8.57e-08!49;UBERON:0005173!8.57e-08!49;UBERON:0002417!8.57e-08!49;UBERON:0000916!8.57e-08!49;UBERON:0002108!2.24e-07!16;UBERON:0009854!7.20e-07!23;UBERON:0009856!7.20e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.02e-25,31;UBERON:0005409,3.12e-18,47;UBERON:0000344,1.35e-14,15;UBERON:0001242,7.28e-13,13;UBERON:0001262,7.28e-13,13;UBERON:0004786,7.28e-13,13;UBERON:0004923,1.07e-09,24;UBERON:0003350,5.67e-09,9;UBERON:0004808,5.67e-09,9;UBERON:0001277,5.67e-09,9;UBERON:0004119,1.56e-08,118;UBERON:0000925,1.56e-08,118;UBERON:0006595,1.56e-08,118;UBERON:0001007,4.13e-08,116;UBERON:0001555,4.13e-08,116;UBERON:0007026,4.13e-08,116;UBERON:0004921,3.46e-07,114;UBERON:0000485,8.91e-07,11|phase1_expression=0,75.378688050102,50.049916332849,52.3263085560816,76.6370466817911,24.6782529710478,16.3528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0,0,44.3179011137737,35.099620003277,72.3532274784925,64.6142994238612,56.4534629637029,102.992693345355,106.356714758691,49.2241733654776,0,0,0,28.3074587356249,24.1040235769814,27.3586937391575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,5.05599912474307,0,0,0,0,0,0,0,0,0,0,10.6191008138726,0,0,0.867426633830679,1.82679286987285,4.15107895060905,0.452167921657868,0.587943535678524,0,15.8204779349999,0.144599356919912,0,0,0,0,18.6391761218122,0,0,47.7704693240066,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0.567318240503458,0,0,0,0,0,1.39323986772945,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,46.5890484007155,42.8409917994942,0.853153002140936,1.85789337488351,15.5929628199733,33.4794650874749,44.2532307251292,46.605278397577,42.2330864774615,35.2455763109383,29.4062194296315,33.8226002469956,25.7352594997239,47.6374286586737,35.0143640797005,38.4342657380929,2.84501851429623,5.82667414309617,10.1436962105772,10.1825663922657,14.9343415119072,14.307707257625,20.1092188055138,19.4845395333075,21.0378295307442,17.1522057851303,0.296452627087149,3.17005700860579,6.09332884850929,12.367416181167,16.2288097110802,21.9471215374699,30.5551022137704,26.7557407829254,12.6465476884528,41.4587733914003,12.9391385874619,22.3284568601102,14.6657706363843,5.30415643688935,4.66433275156972,6.27176577772377,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,1.42452482933804,0,0,0,0.242780636154981,3.93020624054176,7.35559811048003,10.9261700365886,11.6825356218692,8.01127708821486,7.27067458955011,9.9819265947722,6.0046984007805,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,2.58138878870081,1.90648863777438,0,0,0,0,0,0.164140899745061,36.4351045787313,0,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,6.69633113095168,2.71814784818809,2.83871332870031,2.15782954215713,2.97552440611209,0,20.2199358335197,0,0,0,0,0,0,0,0.234714477291508,0.781226309063701,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,2.39027048055788,2.91728060481953,1.04806581313991,2.02227859295016,4.4449345560323,3.29656091582231,3.85103051510178,4.04315538822076,5.32306529769503,5.28153755881013,5.80577346313271,5.31408764960415,4.88201486122713,4.28664322154766,4.28772005995965,3.27945674788299,4.94503080963968,4.12156976376312,5.48590803816665,4.61437096014278,4.29185141905178,4.65108533223451,4.23492211868988,5.4153349050673,5.48783918618318,4.47218509444333,5.02475221229689,5.05028044491965,5.57584585183618,5.31924204828043,1.63692417267876,3.09873682371932,5.98010494041538,0,4.21076895201735,6.87587372954555,0,0,0|short_description=p1@Slc39a5}} | ||
|EntrezGene=72002 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q9D856 | |||
|association_with_transcript=0bp_to_ENSMUST00000042666,NM_001136237,uc007hmp.2_5end | |||
|description=CAGE_peak_1_at_Slc39a5_5end | |||
|id=chr10:127838274..127838290,- | |||
|ontology_enrichment_celltype=CL:0002563!3.82e-08!9;CL:0002251!3.82e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.67e-09,9;CL:0002251,5.67e-09,9;CL:0000239,9.19e-07,6;CL:0000677,9.19e-07,6;CL:0000584,9.19e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.03e-26!43;UBERON:0005409!2.40e-23!59;UBERON:0004119!2.01e-13!130;UBERON:0000925!2.01e-13!130;UBERON:0006595!2.01e-13!130;UBERON:0000344!3.84e-13!15;UBERON:0001007!6.28e-13!128;UBERON:0001555!6.28e-13!128;UBERON:0007026!6.28e-13!128;UBERON:0004921!7.99e-12!126;UBERON:0004185!7.99e-12!126;UBERON:0001242!1.33e-11!13;UBERON:0000060!1.33e-11!13;UBERON:0001262!1.33e-11!13;UBERON:0004786!1.33e-11!13;UBERON:0004923!7.77e-10!24;UBERON:0003350!3.82e-08!9;UBERON:0004808!3.82e-08!9;UBERON:0001277!3.82e-08!9;UBERON:0005172!8.57e-08!49;UBERON:0005173!8.57e-08!49;UBERON:0002417!8.57e-08!49;UBERON:0000916!8.57e-08!49;UBERON:0002108!2.24e-07!16;UBERON:0009854!7.20e-07!23;UBERON:0009856!7.20e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.02e-25,31;UBERON:0005409,3.12e-18,47;UBERON:0000344,1.35e-14,15;UBERON:0001242,7.28e-13,13;UBERON:0001262,7.28e-13,13;UBERON:0004786,7.28e-13,13;UBERON:0004923,1.07e-09,24;UBERON:0003350,5.67e-09,9;UBERON:0004808,5.67e-09,9;UBERON:0001277,5.67e-09,9;UBERON:0004119,1.56e-08,118;UBERON:0000925,1.56e-08,118;UBERON:0006595,1.56e-08,118;UBERON:0001007,4.13e-08,116;UBERON:0001555,4.13e-08,116;UBERON:0007026,4.13e-08,116;UBERON:0004921,3.46e-07,114;UBERON:0000485,8.91e-07,11 | |||
|phase1_expression=0,75.378688050102,50.049916332849,52.3263085560816,76.6370466817911,24.6782529710478,16.3528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0,0,44.3179011137737,35.099620003277,72.3532274784925,64.6142994238612,56.4534629637029,102.992693345355,106.356714758691,49.2241733654776,0,0,0,28.3074587356249,24.1040235769814,27.3586937391575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,5.05599912474307,0,0,0,0,0,0,0,0,0,0,10.6191008138726,0,0,0.867426633830679,1.82679286987285,4.15107895060905,0.452167921657868,0.587943535678524,0,15.8204779349999,0.144599356919912,0,0,0,0,18.6391761218122,0,0,47.7704693240066,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0.567318240503458,0,0,0,0,0,1.39323986772945,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,46.5890484007155,42.8409917994942,0.853153002140936,1.85789337488351,15.5929628199733,33.4794650874749,44.2532307251292,46.605278397577,42.2330864774615,35.2455763109383,29.4062194296315,33.8226002469956,25.7352594997239,47.6374286586737,35.0143640797005,38.4342657380929,2.84501851429623,5.82667414309617,10.1436962105772,10.1825663922657,14.9343415119072,14.307707257625,20.1092188055138,19.4845395333075,21.0378295307442,17.1522057851303,0.296452627087149,3.17005700860579,6.09332884850929,12.367416181167,16.2288097110802,21.9471215374699,30.5551022137704,26.7557407829254,12.6465476884528,41.4587733914003,12.9391385874619,22.3284568601102,14.6657706363843,5.30415643688935,4.66433275156972,6.27176577772377,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,1.42452482933804,0,0,0,0.242780636154981,3.93020624054176,7.35559811048003,10.9261700365886,11.6825356218692,8.01127708821486,7.27067458955011,9.9819265947722,6.0046984007805,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,2.58138878870081,1.90648863777438,0,0,0,0,0,0.164140899745061,36.4351045787313,0,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,6.69633113095168,2.71814784818809,2.83871332870031,2.15782954215713,2.97552440611209,0,20.2199358335197,0,0,0,0,0,0,0,0.234714477291508,0.781226309063701,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,2.39027048055788,2.91728060481953,1.04806581313991,2.02227859295016,4.4449345560323,3.29656091582231,3.85103051510178,4.04315538822076,5.32306529769503,5.28153755881013,5.80577346313271,5.31408764960415,4.88201486122713,4.28664322154766,4.28772005995965,3.27945674788299,4.94503080963968,4.12156976376312,5.48590803816665,4.61437096014278,4.29185141905178,4.65108533223451,4.23492211868988,5.4153349050673,5.48783918618318,4.47218509444333,5.02475221229689,5.05028044491965,5.57584585183618,5.31924204828043,1.63692417267876,3.09873682371932,5.98010494041538,0,4.21076895201735,6.87587372954555,0,0,0 | |||
|short_description=p1@Slc39a5 | |||
}} |
Revision as of 16:09, 12 September 2013
Short description: | p1@Slc39a5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc39a5_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000042666, NM_001136237, uc007hmp.2_5end |
EntrezGene: | Slc39a5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.67e-09 | 9 |
epithelial cell of alimentary canal | 5.67e-09 | 9 |
brush border epithelial cell | 9.19e-07 | 6 |
gut absorptive cell | 9.19e-07 | 6 |
enterocyte | 9.19e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.02e-25 | 31 |
gastrointestinal system | 3.12e-18 | 47 |
mucosa | 1.35e-14 | 15 |
intestinal mucosa | 7.28e-13 | 13 |
wall of intestine | 7.28e-13 | 13 |
gastrointestinal system mucosa | 7.28e-13 | 13 |
organ component layer | 1.07e-09 | 24 |
epithelium of mucosa | 5.67e-09 | 9 |
gastrointestinal system epithelium | 5.67e-09 | 9 |
intestinal epithelium | 5.67e-09 | 9 |
endoderm-derived structure | 1.56e-08 | 118 |
endoderm | 1.56e-08 | 118 |
presumptive endoderm | 1.56e-08 | 118 |
digestive system | 4.13e-08 | 116 |
digestive tract | 4.13e-08 | 116 |
primitive gut | 4.13e-08 | 116 |
subdivision of digestive tract | 3.46e-07 | 114 |
simple columnar epithelium | 8.91e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.