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FFCP PHASE1:Mm9::chr2:6134026..6134048,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=67856|HGNC=|MCL_coexpression_id=8|UniProt=Q9D7J9|association_with_transcript=0bp_to_NM_024208,uc008igi.1_5end|description=CAGE_peak_1_at_Echdc3_5end|id=chr2:6134026..6134048,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.21e-14!66;UBERON:0000466!2.98e-14!79;UBERON:0005177!6.09e-14!85;UBERON:0002365!1.20e-13!25;UBERON:0002330!1.20e-13!25;UBERON:0003914!1.65e-13!47;UBERON:0005172!1.54e-12!49;UBERON:0005173!1.54e-12!49;UBERON:0002417!1.54e-12!49;UBERON:0000916!1.54e-12!49;UBERON:0002100!2.39e-12!98;UBERON:0002107!5.68e-12!22;UBERON:0007499!5.68e-12!22;UBERON:0006925!5.68e-12!22;UBERON:0009497!5.68e-12!22;UBERON:0000015!5.68e-12!22;UBERON:0002423!5.68e-12!22;UBERON:0006235!5.68e-12!22;UBERON:0008835!5.68e-12!22;UBERON:0003894!5.68e-12!22;UBERON:0004161!5.68e-12!22;UBERON:0008836!5.68e-12!22;UBERON:0009854!9.78e-12!23;UBERON:0009856!9.78e-12!23;UBERON:0005256!1.42e-10!47;UBERON:0000926!4.49e-09!193;UBERON:0004120!4.49e-09!193;UBERON:0006603!4.49e-09!193;UBERON:0003104!1.11e-08!131;UBERON:0009142!1.11e-08!131|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.11e-17,79;UBERON:0002100,2.70e-16,90;UBERON:0009569,1.62e-14,66;UBERON:0002365,8.70e-14,25;UBERON:0002330,8.70e-14,25;UBERON:0003914,1.21e-13,47;UBERON:0005172,2.23e-12,49;UBERON:0005173,2.23e-12,49;UBERON:0002417,2.23e-12,49;UBERON:0000916,2.23e-12,49;UBERON:0002107,4.32e-12,22;UBERON:0007499,4.32e-12,22;UBERON:0006925,4.32e-12,22;UBERON:0009497,4.32e-12,22;UBERON:0000015,4.32e-12,22;UBERON:0002423,4.32e-12,22;UBERON:0006235,4.32e-12,22;UBERON:0008835,4.32e-12,22;UBERON:0003894,4.32e-12,22;UBERON:0004161,4.32e-12,22;UBERON:0008836,4.32e-12,22;UBERON:0003104,5.14e-12,61;UBERON:0009142,5.14e-12,61;UBERON:0009854,7.48e-12,23;UBERON:0009856,7.48e-12,23;UBERON:0005256,1.21e-11,45|phase1_expression=1.44133962394315,1.04692622291808,0.454999239389536,1.20985684522732,1.50268718983904,3.3575854382378,2.33612640595526,0.258246646883153,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.404950534779652,0.699561878128147,1.10411757875383,1.23402990245165,2.54633791078818,12.5013636522073,0.297872853602656,0,2.55987876469451,3.89995777814189,1.72269589234506,1.29228598847722,1.50829862880122,3.6104449696711,5.29263272495855,1.10865255327652,0,1.23012957516914,0,9.53210345179206,4.82080471539628,3.87921776898501,0,0,0,0.588231488031014,0,0,24.6757763232131,20.1740093126834,9.36088436024576,10.1710874765245,4.57852828398938,14.2796018777407,8.55491555926847,4.33957907038624,4.31257693094915,1.34226084846189,0,0,9.26133969729409,8.30946975822394,7.73508138416164,0,0,0,2.71075625655306,5.33576877666684,0.899899717281399,0.988866362566974,3.5524005747305,3.59520132622086,7.68436610643109,0.207379224616955,0,0,1.42825492201902,0.441737081903227,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.127687338085188,0.921639199537461,0.131886287730194,0.365950574409639,0,0.279182999001381,1.12552522006336,2.44477196442896,0.294628585473668,0.142371680799103,0.186399445825301,0.681535739998656,0.831287161174641,8.69593466105033,123.040614408338,113.555212729194,230.992966020986,187.135608224929,184.587077484102,81.3173192562843,11.2484012901518,12.7295142255406,12.0135455333516,3.09855523508697,11.5493829672886,12.7402619853323,0,11.9070072556168,12.92135313923,15.6712577954583,82.3265772774422,1.29468941823586,22.1178787206589,2.94925055502431,17.9634632204163,17.0655467969483,29.9938054699719,26.5750478126693,37.1973110335839,15.5732829672656,39.7648231529757,3.5384422077995,2.91180329905337,2.65009822152472,2.90925151881133,5.59175283654366,1.75668478206928,1.8850203613211,3.32094171771169,1.43778149407104,2.99951365496704,0.889491589511453,1.49790639404823,0.457500602818626,0,1.04294592115366,0.767146371990992,0.83115217823824,0.973447578406546,3.1570202793598,5.97153458928446,19.2069296409593,13.0473950649614,1.82168620147785,0.919608417733892,1.80062129805349,2.56198190320716,2.17716797284249,2.3060469651273,2.15513966487376,5.69147415625834,0.646703978798527,1.70195472151037,1.40760899331159,0.43839146485515,2.50242524303038,4.52727816478817,5.76189981942242,2.7864797354589,2.1066395619397,2.83082697826187,0.852490498186778,1.86413195281952,4.22146907965973,3.42117916775928,4.49814997611899,3.93528463494808,4.31947916084659,4.65067889500816,5.90201483079162,6.07179780309281,8.88623189532794,13.2975645904067,17.7540692905424,20.7603982143972,19.1008600303214,21.0704077453784,1.26173969138476,0.514523061896422,0.660837565967596,1.85115396664481,2.98603550749328,4.18026009348789,4.25262622362908,5.84882221407693,4.22518283305254,5.32631753115166,2.84717436926707,3.78807595865225,3.77002813200404,3.18330355265841,3.11942539390592,0.898819408654221,2.16138049874694,2.98711909881551,4.55202962287396,4.91268604221834,6.76246414038483,7.53509913027663,7.5641469995374,7.99548346749632,18.5915419145316,37.1977572908597,37.67969468193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|EntrezGene=67856
|HGNC=
|MCL_coexpression_id=8
|UniProt=Q9D7J9
|association_with_transcript=0bp_to_NM_024208,uc008igi.1_5end
|description=CAGE_peak_1_at_Echdc3_5end
|id=chr2:6134026..6134048,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!1.21e-14!66;UBERON:0000466!2.98e-14!79;UBERON:0005177!6.09e-14!85;UBERON:0002365!1.20e-13!25;UBERON:0002330!1.20e-13!25;UBERON:0003914!1.65e-13!47;UBERON:0005172!1.54e-12!49;UBERON:0005173!1.54e-12!49;UBERON:0002417!1.54e-12!49;UBERON:0000916!1.54e-12!49;UBERON:0002100!2.39e-12!98;UBERON:0002107!5.68e-12!22;UBERON:0007499!5.68e-12!22;UBERON:0006925!5.68e-12!22;UBERON:0009497!5.68e-12!22;UBERON:0000015!5.68e-12!22;UBERON:0002423!5.68e-12!22;UBERON:0006235!5.68e-12!22;UBERON:0008835!5.68e-12!22;UBERON:0003894!5.68e-12!22;UBERON:0004161!5.68e-12!22;UBERON:0008836!5.68e-12!22;UBERON:0009854!9.78e-12!23;UBERON:0009856!9.78e-12!23;UBERON:0005256!1.42e-10!47;UBERON:0000926!4.49e-09!193;UBERON:0004120!4.49e-09!193;UBERON:0006603!4.49e-09!193;UBERON:0003104!1.11e-08!131;UBERON:0009142!1.11e-08!131
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.11e-17,79;UBERON:0002100,2.70e-16,90;UBERON:0009569,1.62e-14,66;UBERON:0002365,8.70e-14,25;UBERON:0002330,8.70e-14,25;UBERON:0003914,1.21e-13,47;UBERON:0005172,2.23e-12,49;UBERON:0005173,2.23e-12,49;UBERON:0002417,2.23e-12,49;UBERON:0000916,2.23e-12,49;UBERON:0002107,4.32e-12,22;UBERON:0007499,4.32e-12,22;UBERON:0006925,4.32e-12,22;UBERON:0009497,4.32e-12,22;UBERON:0000015,4.32e-12,22;UBERON:0002423,4.32e-12,22;UBERON:0006235,4.32e-12,22;UBERON:0008835,4.32e-12,22;UBERON:0003894,4.32e-12,22;UBERON:0004161,4.32e-12,22;UBERON:0008836,4.32e-12,22;UBERON:0003104,5.14e-12,61;UBERON:0009142,5.14e-12,61;UBERON:0009854,7.48e-12,23;UBERON:0009856,7.48e-12,23;UBERON:0005256,1.21e-11,45
|phase1_expression=1.44133962394315,1.04692622291808,0.454999239389536,1.20985684522732,1.50268718983904,3.3575854382378,2.33612640595526,0.258246646883153,0,0,0,0,0,0.0874204024189974,0.333109761815663,0.404950534779652,0.699561878128147,1.10411757875383,1.23402990245165,2.54633791078818,12.5013636522073,0.297872853602656,0,2.55987876469451,3.89995777814189,1.72269589234506,1.29228598847722,1.50829862880122,3.6104449696711,5.29263272495855,1.10865255327652,0,1.23012957516914,0,9.53210345179206,4.82080471539628,3.87921776898501,0,0,0,0.588231488031014,0,0,24.6757763232131,20.1740093126834,9.36088436024576,10.1710874765245,4.57852828398938,14.2796018777407,8.55491555926847,4.33957907038624,4.31257693094915,1.34226084846189,0,0,9.26133969729409,8.30946975822394,7.73508138416164,0,0,0,2.71075625655306,5.33576877666684,0.899899717281399,0.988866362566974,3.5524005747305,3.59520132622086,7.68436610643109,0.207379224616955,0,0,1.42825492201902,0.441737081903227,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.127687338085188,0.921639199537461,0.131886287730194,0.365950574409639,0,0.279182999001381,1.12552522006336,2.44477196442896,0.294628585473668,0.142371680799103,0.186399445825301,0.681535739998656,0.831287161174641,8.69593466105033,123.040614408338,113.555212729194,230.992966020986,187.135608224929,184.587077484102,81.3173192562843,11.2484012901518,12.7295142255406,12.0135455333516,3.09855523508697,11.5493829672886,12.7402619853323,0,11.9070072556168,12.92135313923,15.6712577954583,82.3265772774422,1.29468941823586,22.1178787206589,2.94925055502431,17.9634632204163,17.0655467969483,29.9938054699719,26.5750478126693,37.1973110335839,15.5732829672656,39.7648231529757,3.5384422077995,2.91180329905337,2.65009822152472,2.90925151881133,5.59175283654366,1.75668478206928,1.8850203613211,3.32094171771169,1.43778149407104,2.99951365496704,0.889491589511453,1.49790639404823,0.457500602818626,0,1.04294592115366,0.767146371990992,0.83115217823824,0.973447578406546,3.1570202793598,5.97153458928446,19.2069296409593,13.0473950649614,1.82168620147785,0.919608417733892,1.80062129805349,2.56198190320716,2.17716797284249,2.3060469651273,2.15513966487376,5.69147415625834,0.646703978798527,1.70195472151037,1.40760899331159,0.43839146485515,2.50242524303038,4.52727816478817,5.76189981942242,2.7864797354589,2.1066395619397,2.83082697826187,0.852490498186778,1.86413195281952,4.22146907965973,3.42117916775928,4.49814997611899,3.93528463494808,4.31947916084659,4.65067889500816,5.90201483079162,6.07179780309281,8.88623189532794,13.2975645904067,17.7540692905424,20.7603982143972,19.1008600303214,21.0704077453784,1.26173969138476,0.514523061896422,0.660837565967596,1.85115396664481,2.98603550749328,4.18026009348789,4.25262622362908,5.84882221407693,4.22518283305254,5.32631753115166,2.84717436926707,3.78807595865225,3.77002813200404,3.18330355265841,3.11942539390592,0.898819408654221,2.16138049874694,2.98711909881551,4.55202962287396,4.91268604221834,6.76246414038483,7.53509913027663,7.5641469995374,7.99548346749632,18.5915419145316,37.1977572908597,37.67969468193,43.5591988643956,169.570902693849,3.17005700860579,8.05891879964132,11.6928298440124,16.0259495896917,25.5647789337562,61.6194561311036,129.463261852865,25.1309601501305,129.867548437963,107.826154895516,199.467547950318,187.534641541851,184.635159779339,163.610441131984,169.337675998542,9.79191907883005,1.70542270593436,1.95557971730431,2.54617628662782,8.91822943496308,16.5831194867398,29.0413241880937,17.7571619550597,11.6650006638581,9.52298165489732,7.49437412690189,12.2897486036803,7.42545422023351,8.67894351489069,7.53956419696361,0.54390568381871,46.7176059368084,23.1786866895975,1.28440471990234,0.703270119553219,4.75411341592359,10.3513080153793,0,0.390438744296638,0.430846795465598,0.955875191810208,0.222798674082394,1.13230612315533,1.21443210502468,1.16902343164525,1.58115111178609,0.321321316421807,20.1554920995741,7.12262414669021,2.93196526836437,6.92874516484649,17.2568679841952,8.74010290157933,12.09294227859,10.7504895460862,10.9261700365886,11.0676653259814,5.16856586336442,9.45187696641514,16.7553767840819,16.7499481705982,17.9211634577498,11.3449097573006,15.6602218646742,1.98067203434441,1.29358683782755,1.50035924522115,0.532020700926821,2.14042581122485,1.97458824722545,3.95804433848979,1.40803024838226,4.87213762986786,0.882113592219848,6.10079135883476,3.39075296061402,4.22190474497091,6.68485126417564,5.25250879184196,2.33184669303881,0.927126510052548,0.854354403989263,4.74689796315412,5.00025223898222,1.50694765603753,0.956859594047176,0.228778173206523,1.35982743995084,1.6794174278839,1.65839968565309,20.0480829783174,1.58167996790568,5.28630614529807,6.48032044930808,16.517975385143,15.0670168984863,11.7331981354794,19.8368293740806,12.3025292732494,2.85152941241944,22.3682152711293,7.89170114157866,6.27969493384711,6.12196414691261,9.72255941720238,11.3660644660403,11.3200604078821,13.2613679669702,10.2861464026721,6.39642000996836,3.8653459332161,5.18454011264158,2.52808896502543,1.01362607645082,1.33524244314275,1.55904987573354,0.716106782669926,1.58945083825012,1.08175904567972,1.18151621739662,1.00966449948148,0.457240839929999,0.604957110821043,0.584747284438515,0.673482891482306,1.05189211963412,6.57518112484113,2.44184548711471,1.88399098879899,1.84673078000486,10.0458588896739,6.19352168988901,5.31139710375069,5.14484109789758,5.517293144389,0,0.920650473014354,0,0.171853182343688,0,0,0,0.900642406448441,0.906284817968409,1.03552062350364,1.03787347584177,0.798049746802062,2.21953687480374,5.83456120963906,7.54607385460736,17.2812897943013,20.224452229947,19.5733304376949,16.6877988987744,17.1834103999382,14.4483200937437,13.5810965797975,14.7953581802414,14.213583833881,14.0716898941253,14.7651044297753,13.5584661355481,11.3816440073586,10.3021475200827,14.8670909335741,18.172070376427,16.5052499728184,14.7830437767339,18.7496877455704,16.3750321922675,15.3998586362851,18.8415812058956,15.7841826862706,11.5433496768983,17.9565526930476,13.1684870117833,13.3966096030766,11.867700251921,13.789378865551,19.2906610981141,3.49734809113124,13.5680332898337,13.9666185131394,6.88637995447836,10.8089795368563,10.6659204385394
|short_description=p1@Echdc3
}}

Revision as of 00:14, 14 September 2013

Short description:p1@Echdc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Echdc3_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_NM_024208, uc008igi.1_5end
EntrezGene:Echdc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Echdc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C15.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.36
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.28
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.31
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7123.04
Mouse hepatocyte, donor1.CNhs13078.11714-123C4113.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C8230.99
Mouse hepatocyte, donor6.CNhs13090.11822-124F4187.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F6184.59
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A781.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B682.33
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D722.12
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D617.96
adrenal gland, embryo E17.CNhs11043.1263-45I117.07
adrenal gland, embryo E18.CNhs11026.1262-18F529.99
adrenal gland, neonate N00.CNhs11191.1311-23C126.58
adrenal gland, neonate N25.CNhs11223.1377-27I337.20
amnion, adult pregnant day17.5.CNhs10488.583-22A815.57
aorta, adult.CNhs10498.46-23H139.76
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.97
epididymis, adult.CNhs10490.58-23B219.21
eyeball, adult.CNhs10484.31-12G413.05
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E54.65
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I28.89
heart, neonate N10.CNhs11118.749-24G113.30
heart, neonate N16.CNhs11209.782-15G117.75
heart, neonate N20.CNhs11127.821-26I620.76
heart, neonate N25.CNhs11196.1351-25D319.10
heart, neonate N30.CNhs11202.1390-42D221.07
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F75.33
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F84.91
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I27.54
kidney, embryo E18.CNhs11001.1288-20C77.56
kidney, neonate N00.CNhs11214.646-21G78.00
kidney, neonate N10.CNhs11206.758-6D518.59
kidney, neonate N20.CNhs11113.832-19I137.20
kidney, neonate N25.CNhs11122.1353-25F337.68
kidney, neonate N30.CNhs11203.1385-42H143.56
liver, adult pregnant day01.CNhs10466.508-5B2169.57
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H68.06
liver, embryo E14.CNhs10594.409-16E111.69
liver, embryo E15.CNhs10520.433-16D716.03
liver, embryo E16.CNhs10523.462-17F525.56
liver, embryo E17.CNhs10510.481-18A361.62
liver, embryo E18.CNhs10579.499-43G4129.46
liver, neonate N00.CNhs11117.641-24F425.13
liver, neonate N03.CNhs11123.1345-25G2129.87
liver, neonate N06.CNhs11101.684-20A8107.83
liver, neonate N07.CNhs11103.716-20H2199.47
liver, neonate N10.CNhs11115.751-24B9187.53
liver, neonate N20.CNhs11220.823-25A3184.64
liver, neonate N25.CNhs11198.1368-26H1163.61
liver, neonate N30.CNhs11106.1382-42D1169.34
lung, adult.CNhs10474.28-22B19.79
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A616.58
lung, embryo E18.CNhs10583.1287-20I629.04
lung, neonate N00.CNhs11224.640-42C617.76
lung, neonate N06.CNhs11212.683-20E511.67
lung, neonate N07.CNhs11111.715-19A39.52
lung, neonate N10.CNhs11219.750-23E67.49
lung, neonate N20.CNhs11109.822-18A412.29
lung, neonate N25.CNhs11119.1359-25C77.43
lung, neonate N30.CNhs11133.1394-42H28.68
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B646.72
mammary gland, adult pregnant day19.CNhs10476.588-5H223.18
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.35
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I720.16
ovary, embryo E18.CNhs11040.505-44H77.12
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G66.93
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F48.74
pancreas, embryo E15.CNhs11042.1556-45F212.09
pancreas, embryo E16.CNhs11003.460-26E510.75
pancreas, embryo E17.CNhs10599.1558-45G310.93
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D79.45
pancreas, neonate N02.CNhs11139.1539-43D816.76
pancreas, neonate N16.CNhs11136.787-43B616.75
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G815.66
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C36.10
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H34.22
skin, neonate N06.CNhs11097.693-20I56.68
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F25.00
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H620.05
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D46.48
stomach, embryo E17.CNhs11006.1035-18D516.52
stomach, embryo E18.CNhs10999.1286-20C615.07
stomach, neonate N03.CNhs11193.1340-24B811.73
stomach, neonate N07.CNhs11210.718-18A919.84
stomach, neonate N25.CNhs11104.1355-25E412.30
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C122.37
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F56.28
testis, embryo E15.CNhs11034.443-27C56.12
testis, embryo E16.CNhs11033.470-26G59.72
testis, embryo E17.CNhs11029.486-18I511.37
testis, embryo E18.CNhs11027.503-18G511.32
testis, neonate N00.CNhs11189.1300-22B713.26
testis, neonate N07.CNhs11222.726-26I410.29
testis, neonate N10.CNhs11204.763-44D96.40
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E410.05
uterus, adult pregnant day19.CNhs10497.590-15F56.19
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B17.55
whole body, embryo E16.CNhs10514.453-14F217.28
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.57
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.18
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.87
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.51
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.75
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.40
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.79
whole body, embryo E17.5.CNhs10513.490-9F919.29
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B313.57
whole body, neonate N00.CNhs10525.657-19C213.97
whole body, neonate N01.CNhs10576.659-23C66.89
whole body, neonate N06.CNhs10515.692-21D110.81
whole body, neonate N10.CNhs10518.761-6B410.67





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element1.11e-1779
trunk2.70e-1690
subdivision of trunk1.62e-1466
exocrine gland8.70e-1425
exocrine system8.70e-1425
epithelial tube1.21e-1347
abdomen element2.23e-1249
abdominal segment element2.23e-1249
abdominal segment of trunk2.23e-1249
abdomen2.23e-1249
liver4.32e-1222
epithelial sac4.32e-1222
digestive gland4.32e-1222
epithelium of foregut-midgut junction4.32e-1222
anatomical boundary4.32e-1222
hepatobiliary system4.32e-1222
foregut-midgut junction4.32e-1222
hepatic diverticulum4.32e-1222
liver primordium4.32e-1222
septum transversum4.32e-1222
liver bud4.32e-1222
mesenchyme5.14e-1261
entire embryonic mesenchyme5.14e-1261
digestive tract diverticulum7.48e-1223
sac7.48e-1223
trunk mesenchyme1.21e-1145







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