FFCP PHASE1:Mm9::chr8:113464851..113464875,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=20444|HGNC=|MCL_coexpression_id=9|UniProt=|association_with_transcript=47bp_to_ENSMUST00000138332_5end|description=CAGE_peak_11_at_St3gal2_5end|id=chr8:113464851..113464875,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.63e-12,3;CL:0002202,1.63e-12,3;CL:0000069,1.63e-12,3;CL:0002632,1.63e-12,3;CL:0002368,1.63e-12,3;CL:0000307,1.63e-12,3;CL:0000377,1.63e-12,3;CL:0000349,2.42e-12,3;CL:0000351,2.42e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!8.91e-10!5;UBERON:0001003!8.91e-10!5;UBERON:0002097!8.91e-10!5;UBERON:0002199!8.91e-10!5;UBERON:0007029!8.91e-10!5;UBERON:0007376!8.91e-10!5;UBERON:0002416!8.91e-10!5;UBERON:0007383!8.91e-10!5;UBERON:0004175!3.69e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.66e-13,3;UBERON:0006555,3.66e-13,3;UBERON:0005103,3.66e-13,3;UBERON:0000083,3.66e-13,3;UBERON:0009201,3.66e-13,3;UBERON:0004819,3.66e-13,3;UBERON:0006553,3.66e-13,3;UBERON:0003074,3.66e-13,3;UBERON:0003060,3.66e-13,3;UBERON:0004871,5.52e-13,3;UBERON:0003126,1.63e-12,3;UBERON:0001005,1.63e-12,3;UBERON:0007196,1.63e-12,3;UBERON:0001558,1.63e-12,3;UBERON:0000358,2.42e-12,3;UBERON:0000307,2.42e-12,3;UBERON:0007010,2.42e-12,3;UBERON:0000996,2.48e-10,1;UBERON:0000305,3.04e-10,1;UBERON:0000080,4.16e-10,4;UBERON:0005904,4.16e-10,4;UBERON:0006947,4.16e-10,4;UBERON:0002120,4.16e-10,4;UBERON:0004054,4.16e-10,4;UBERON:0004875,4.16e-10,4;UBERON:0004876,4.16e-10,4;UBERON:0005721,4.16e-10,4;UBERON:0005754,4.16e-10,4;UBERON:0007297,4.16e-10,4;UBERON:0004175,9.79e-10,9;UBERON:0004122,3.41e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.771778308107841,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,1.52015919285059,1.01104889002957,0.22836775943812,0,0,0,0,0,0,0,0,1.73036477414062,0.144599356919912,0,0.323533699894818,0,0,0,0.585561594023094,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,3.85661608891288,37.4029682481839,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0.655739781506702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0.98931751764888,0.807322133479528,0.663442174209714,0.835606408021955,1.47726809770555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0.523511883968059,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.887943813496259,1.34570784914214,1.00730769818447,0,0.375364950902364,0,2.14368379079066,0,0,0,1.14579102687879,0,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p11@St3gal2}} | ||
|EntrezGene=20444 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENSMUST00000138332_5end | |||
|description=CAGE_peak_11_at_St3gal2_5end | |||
|id=chr8:113464851..113464875,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.63e-12,3;CL:0002202,1.63e-12,3;CL:0000069,1.63e-12,3;CL:0002632,1.63e-12,3;CL:0002368,1.63e-12,3;CL:0000307,1.63e-12,3;CL:0000377,1.63e-12,3;CL:0000349,2.42e-12,3;CL:0000351,2.42e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!8.91e-10!5;UBERON:0001003!8.91e-10!5;UBERON:0002097!8.91e-10!5;UBERON:0002199!8.91e-10!5;UBERON:0007029!8.91e-10!5;UBERON:0007376!8.91e-10!5;UBERON:0002416!8.91e-10!5;UBERON:0007383!8.91e-10!5;UBERON:0004175!3.69e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.66e-13,3;UBERON:0006555,3.66e-13,3;UBERON:0005103,3.66e-13,3;UBERON:0000083,3.66e-13,3;UBERON:0009201,3.66e-13,3;UBERON:0004819,3.66e-13,3;UBERON:0006553,3.66e-13,3;UBERON:0003074,3.66e-13,3;UBERON:0003060,3.66e-13,3;UBERON:0004871,5.52e-13,3;UBERON:0003126,1.63e-12,3;UBERON:0001005,1.63e-12,3;UBERON:0007196,1.63e-12,3;UBERON:0001558,1.63e-12,3;UBERON:0000358,2.42e-12,3;UBERON:0000307,2.42e-12,3;UBERON:0007010,2.42e-12,3;UBERON:0000996,2.48e-10,1;UBERON:0000305,3.04e-10,1;UBERON:0000080,4.16e-10,4;UBERON:0005904,4.16e-10,4;UBERON:0006947,4.16e-10,4;UBERON:0002120,4.16e-10,4;UBERON:0004054,4.16e-10,4;UBERON:0004875,4.16e-10,4;UBERON:0004876,4.16e-10,4;UBERON:0005721,4.16e-10,4;UBERON:0005754,4.16e-10,4;UBERON:0007297,4.16e-10,4;UBERON:0004175,9.79e-10,9;UBERON:0004122,3.41e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0.771778308107841,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,1.52015919285059,1.01104889002957,0.22836775943812,0,0,0,0,0,0,0,0,1.73036477414062,0.144599356919912,0,0.323533699894818,0,0,0,0.585561594023094,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,3.85661608891288,37.4029682481839,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0.655739781506702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0.98931751764888,0.807322133479528,0.663442174209714,0.835606408021955,1.47726809770555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0.523511883968059,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.887943813496259,1.34570784914214,1.00730769818447,0,0.375364950902364,0,2.14368379079066,0,0,0,1.14579102687879,0,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p11@St3gal2 | |||
}} |
Revision as of 14:46, 14 September 2013
Short description: | p11@St3gal2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_St3gal2_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 47bp_to_ENSMUST00000138332_5end |
EntrezGene: | St3gal2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.63e-12 | 3 |
epithelial cell of tracheobronchial tree | 1.63e-12 | 3 |
branched duct epithelial cell | 1.63e-12 | 3 |
epithelial cell of lower respiratory tract | 1.63e-12 | 3 |
respiratory epithelial cell | 1.63e-12 | 3 |
tracheal epithelial cell | 1.63e-12 | 3 |
tracheoblast | 1.63e-12 | 3 |
extraembryonic cell | 2.42e-12 | 3 |
trophoblast cell | 2.42e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 3.66e-13 | 3 |
excretory tube | 3.66e-13 | 3 |
mesonephric epithelium | 3.66e-13 | 3 |
mesonephric tubule | 3.66e-13 | 3 |
nephric duct | 3.66e-13 | 3 |
kidney epithelium | 3.66e-13 | 3 |
renal duct | 3.66e-13 | 3 |
mesonephric duct | 3.66e-13 | 3 |
pronephric duct | 3.66e-13 | 3 |
somatic layer of lateral plate mesoderm | 5.52e-13 | 3 |
trachea | 1.63e-12 | 3 |
respiratory airway | 1.63e-12 | 3 |
tracheobronchial tree | 1.63e-12 | 3 |
lower respiratory tract | 1.63e-12 | 3 |
blastocyst | 2.42e-12 | 3 |
blastula | 2.42e-12 | 3 |
cleaving embryo | 2.42e-12 | 3 |
vagina | 2.48e-10 | 1 |
amnion | 3.04e-10 | 1 |
mesonephros | 4.16e-10 | 4 |
duct of male reproductive system | 4.16e-10 | 4 |
male genital duct | 4.16e-10 | 4 |
pronephros | 4.16e-10 | 4 |
internal male genitalia | 4.16e-10 | 4 |
nephrogenic cord | 4.16e-10 | 4 |
urogenital ridge | 4.16e-10 | 4 |
pronephric mesoderm | 4.16e-10 | 4 |
rostral part of nephrogenic cord | 4.16e-10 | 4 |
presumptive pronephric mesoderm | 4.16e-10 | 4 |
internal genitalia | 9.79e-10 | 9 |
genitourinary system | 3.41e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.