FFCP PHASE1:Mm9::chr17:34404447..34404457,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14961|HGNC=|MCL_coexpression_id=48|UniProt=|association_with_transcript=400bp_to_ENSMUST00000173103_5end|description=CAGE_peak_7_at_H2-Ab1_5end|id=chr17:34404447..34404457,+|ontology_enrichment_celltype=CL:0000553!2.01e-08!6;CL:0000556!2.01e-08!6|ontology_enrichment_celltype_v019_2=CL:0000553,1.60e-15,6;CL:0000556,1.60e-15,6;CL:0000839,1.75e-12,13;CL:0000945,1.83e-11,1;CL:0000236,1.83e-11,1;CL:0000826,1.83e-11,1;CL:0000050,1.43e-10,9;CL:0000763,3.25e-10,16;CL:0002031,4.72e-10,25;CL:0000049,1.18e-08,19;CL:0000988,7.12e-08,32;CL:0002032,7.12e-08,32;CL:0000037,7.12e-08,32;CL:0000837,7.12e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.27e-13!48;UBERON:0000344!9.17e-11!15;UBERON:0002390!1.95e-10!45;UBERON:0003061!1.95e-10!45;UBERON:0007023!9.60e-09!51;UBERON:0002371!1.80e-08!16;UBERON:0001242!6.30e-08!13;UBERON:0000060!6.30e-08!13;UBERON:0001262!6.30e-08!13;UBERON:0004786!6.30e-08!13;UBERON:0002405!1.77e-07!70;UBERON:0004923!3.38e-07!24;UBERON:0001474!5.13e-07!22;UBERON:0004765!5.13e-07!22;UBERON:0001434!5.13e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0001962,9.51e-20,2;UBERON:0001961,9.51e-20,2;UBERON:0001744,9.51e-20,2;UBERON:0000331,5.73e-14,3;UBERON:0002116,5.73e-14,3;UBERON:0001204,5.73e-14,3;UBERON:0001168,5.73e-14,3;UBERON:0002465,1.62e-13,3;UBERON:0003199,8.99e-11,1;UBERON:0002108,1.01e-10,4;UBERON:0000344,1.29e-10,15;UBERON:0002371,3.25e-10,16;UBERON:0001474,1.62e-07,22;UBERON:0004765,1.62e-07,22;UBERON:0001434,1.62e-07,22;UBERON:0002193,3.13e-07,48;UBERON:0002405,3.13e-07,48;UBERON:0004923,9.31e-07,24|phase1_expression=0,0.697950815278722,0,0.90739263392049,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0.699561878128147,2.83915948822414,1.91960207048034,4.2438965179803,0.255129870453209,0,0,1.11994695955385,1.14704640533585,0,0.430761996159075,0.215471232685889,2.66032787238923,1.51218077855958,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55021727259814,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.512612642393558,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.513554785824136,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@H2-Ab1}} | ||
|EntrezGene=14961 | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|UniProt= | |||
|association_with_transcript=400bp_to_ENSMUST00000173103_5end | |||
|description=CAGE_peak_7_at_H2-Ab1_5end | |||
|id=chr17:34404447..34404457,+ | |||
|ontology_enrichment_celltype=CL:0000553!2.01e-08!6;CL:0000556!2.01e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.60e-15,6;CL:0000556,1.60e-15,6;CL:0000839,1.75e-12,13;CL:0000945,1.83e-11,1;CL:0000236,1.83e-11,1;CL:0000826,1.83e-11,1;CL:0000050,1.43e-10,9;CL:0000763,3.25e-10,16;CL:0002031,4.72e-10,25;CL:0000049,1.18e-08,19;CL:0000988,7.12e-08,32;CL:0002032,7.12e-08,32;CL:0000037,7.12e-08,32;CL:0000837,7.12e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.27e-13!48;UBERON:0000344!9.17e-11!15;UBERON:0002390!1.95e-10!45;UBERON:0003061!1.95e-10!45;UBERON:0007023!9.60e-09!51;UBERON:0002371!1.80e-08!16;UBERON:0001242!6.30e-08!13;UBERON:0000060!6.30e-08!13;UBERON:0001262!6.30e-08!13;UBERON:0004786!6.30e-08!13;UBERON:0002405!1.77e-07!70;UBERON:0004923!3.38e-07!24;UBERON:0001474!5.13e-07!22;UBERON:0004765!5.13e-07!22;UBERON:0001434!5.13e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,9.51e-20,2;UBERON:0001961,9.51e-20,2;UBERON:0001744,9.51e-20,2;UBERON:0000331,5.73e-14,3;UBERON:0002116,5.73e-14,3;UBERON:0001204,5.73e-14,3;UBERON:0001168,5.73e-14,3;UBERON:0002465,1.62e-13,3;UBERON:0003199,8.99e-11,1;UBERON:0002108,1.01e-10,4;UBERON:0000344,1.29e-10,15;UBERON:0002371,3.25e-10,16;UBERON:0001474,1.62e-07,22;UBERON:0004765,1.62e-07,22;UBERON:0001434,1.62e-07,22;UBERON:0002193,3.13e-07,48;UBERON:0002405,3.13e-07,48;UBERON:0004923,9.31e-07,24 | |||
|phase1_expression=0,0.697950815278722,0,0.90739263392049,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0.699561878128147,2.83915948822414,1.91960207048034,4.2438965179803,0.255129870453209,0,0,1.11994695955385,1.14704640533585,0,0.430761996159075,0.215471232685889,2.66032787238923,1.51218077855958,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55021727259814,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.512612642393558,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.513554785824136,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@H2-Ab1 | |||
}} |
Revision as of 14:13, 13 September 2013
Short description: | p7@H2-Ab1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_H2-Ab1_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | 400bp_to_ENSMUST00000173103_5end |
EntrezGene: | H2-Ab1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.60e-15 | 6 |
megakaryocyte | 1.60e-15 | 6 |
myeloid lineage restricted progenitor cell | 1.75e-12 | 13 |
lymphocyte of B lineage | 1.83e-11 | 1 |
B cell | 1.83e-11 | 1 |
pro-B cell | 1.83e-11 | 1 |
megakaryocyte-erythroid progenitor cell | 1.43e-10 | 9 |
myeloid cell | 3.25e-10 | 16 |
hematopoietic lineage restricted progenitor cell | 4.72e-10 | 25 |
common myeloid progenitor | 1.18e-08 | 19 |
hematopoietic cell | 7.12e-08 | 32 |
hematopoietic oligopotent progenitor cell | 7.12e-08 | 32 |
hematopoietic stem cell | 7.12e-08 | 32 |
hematopoietic multipotent progenitor cell | 7.12e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 9.51e-20 | 2 |
mucosa-associated lymphoid tissue | 9.51e-20 | 2 |
lymphoid tissue | 9.51e-20 | 2 |
ileal mucosa | 5.73e-14 | 3 |
ileum | 5.73e-14 | 3 |
mucosa of small intestine | 5.73e-14 | 3 |
wall of small intestine | 5.73e-14 | 3 |
lymphoid system | 1.62e-13 | 3 |
egg chamber | 8.99e-11 | 1 |
small intestine | 1.01e-10 | 4 |
mucosa | 1.29e-10 | 15 |
bone marrow | 3.25e-10 | 16 |
bone element | 1.62e-07 | 22 |
skeletal element | 1.62e-07 | 22 |
skeletal system | 1.62e-07 | 22 |
hemolymphoid system | 3.13e-07 | 48 |
immune system | 3.13e-07 | 48 |
organ component layer | 9.31e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.