FFCP PHASE1:Mm9::chr17:88512729..88512739,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=518|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:88512729..88512739,-|id=chr17:88512729..88512739,-|ontology_enrichment_celltype=CL:0000988!6.44e-20!32;CL:0002032!6.44e-20!32;CL:0000037!6.44e-20!32;CL:0000566!6.44e-20!32;CL:0000837!6.44e-20!32;CL:0000838!2.74e-14!12;CL:0000542!3.96e-13!13;CL:0000051!3.96e-13!13;CL:0002320!4.41e-13!46;CL:0000134!4.41e-13!46;CL:0000219!1.86e-12!54;CL:0000084!1.22e-11!11;CL:0000827!1.22e-11!11;CL:0000624!1.34e-11!8;CL:0000034!1.47e-10!97;CL:0002031!1.68e-10!25;CL:0000791!2.76e-10!9;CL:0000789!2.76e-10!9;CL:0002420!2.76e-10!9;CL:0002419!2.76e-10!9;CL:0000790!2.76e-10!9;CL:0000893!3.00e-10!6;CL:0002489!3.00e-10!6;CL:0000898!3.00e-10!6;CL:0000809!3.00e-10!6;CL:0000810!3.00e-10!6;CL:0000895!3.00e-10!6;CL:0000808!3.00e-10!6;CL:0000894!3.00e-10!6;CL:0000806!3.00e-10!6;CL:0000807!3.00e-10!6;CL:0000805!3.00e-10!6;CL:0002425!3.00e-10!6;CL:0002436!3.00e-10!6;CL:0002427!3.00e-10!6;CL:0002428!3.00e-10!6;CL:0002429!3.00e-10!6;CL:0002433!3.00e-10!6;CL:0002431!3.00e-10!6;CL:0002432!3.00e-10!6;CL:0000738!7.56e-10!17;CL:0002087!7.56e-10!17;CL:0000144!8.28e-09!121;CL:0000012!8.28e-09!121;CL:0000049!1.23e-08!19;CL:0000063!2.41e-08!66;CL:0000723!1.80e-07!91;CL:0000048!1.80e-07!91|ontology_enrichment_celltype_v019_2=CL:0000893,3.16e-07,6;CL:0002489,3.16e-07,6;CL:0000898,3.16e-07,6;CL:0000809,3.16e-07,6;CL:0000810,3.16e-07,6;CL:0000895,3.16e-07,6;CL:0000808,3.16e-07,6;CL:0000894,3.16e-07,6;CL:0000806,3.16e-07,6;CL:0000807,3.16e-07,6;CL:0000805,3.16e-07,6;CL:0002425,3.16e-07,6;CL:0002436,3.16e-07,6;CL:0002427,3.16e-07,6;CL:0002428,3.16e-07,6;CL:0002429,3.16e-07,6;CL:0002433,3.16e-07,6;CL:0002431,3.16e-07,6;CL:0002432,3.16e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.41e-13!46|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,1.68946466582,1.17032263160997,0.513653904676515,0.319088635981346,0,0,0.333109761815663,0,0,0.315462165358238,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,3.1253413780952,0,3.52938892818609,7.5135003345429,3.88408282424923,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63593273913025,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71965487990169,3.35883485576779,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:88512729..88512739,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=518 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:88512729..88512739,- | |||
|id=chr17:88512729..88512739,- | |||
|ontology_enrichment_celltype=CL:0000988!6.44e-20!32;CL:0002032!6.44e-20!32;CL:0000037!6.44e-20!32;CL:0000566!6.44e-20!32;CL:0000837!6.44e-20!32;CL:0000838!2.74e-14!12;CL:0000542!3.96e-13!13;CL:0000051!3.96e-13!13;CL:0002320!4.41e-13!46;CL:0000134!4.41e-13!46;CL:0000219!1.86e-12!54;CL:0000084!1.22e-11!11;CL:0000827!1.22e-11!11;CL:0000624!1.34e-11!8;CL:0000034!1.47e-10!97;CL:0002031!1.68e-10!25;CL:0000791!2.76e-10!9;CL:0000789!2.76e-10!9;CL:0002420!2.76e-10!9;CL:0002419!2.76e-10!9;CL:0000790!2.76e-10!9;CL:0000893!3.00e-10!6;CL:0002489!3.00e-10!6;CL:0000898!3.00e-10!6;CL:0000809!3.00e-10!6;CL:0000810!3.00e-10!6;CL:0000895!3.00e-10!6;CL:0000808!3.00e-10!6;CL:0000894!3.00e-10!6;CL:0000806!3.00e-10!6;CL:0000807!3.00e-10!6;CL:0000805!3.00e-10!6;CL:0002425!3.00e-10!6;CL:0002436!3.00e-10!6;CL:0002427!3.00e-10!6;CL:0002428!3.00e-10!6;CL:0002429!3.00e-10!6;CL:0002433!3.00e-10!6;CL:0002431!3.00e-10!6;CL:0002432!3.00e-10!6;CL:0000738!7.56e-10!17;CL:0002087!7.56e-10!17;CL:0000144!8.28e-09!121;CL:0000012!8.28e-09!121;CL:0000049!1.23e-08!19;CL:0000063!2.41e-08!66;CL:0000723!1.80e-07!91;CL:0000048!1.80e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,3.16e-07,6;CL:0002489,3.16e-07,6;CL:0000898,3.16e-07,6;CL:0000809,3.16e-07,6;CL:0000810,3.16e-07,6;CL:0000895,3.16e-07,6;CL:0000808,3.16e-07,6;CL:0000894,3.16e-07,6;CL:0000806,3.16e-07,6;CL:0000807,3.16e-07,6;CL:0000805,3.16e-07,6;CL:0002425,3.16e-07,6;CL:0002436,3.16e-07,6;CL:0002427,3.16e-07,6;CL:0002428,3.16e-07,6;CL:0002429,3.16e-07,6;CL:0002433,3.16e-07,6;CL:0002431,3.16e-07,6;CL:0002432,3.16e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.41e-13!46 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,1.68946466582,1.17032263160997,0.513653904676515,0.319088635981346,0,0,0.333109761815663,0,0,0.315462165358238,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,3.1253413780952,0,3.52938892818609,7.5135003345429,3.88408282424923,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63593273913025,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71965487990169,3.35883485576779,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:88512729..88512739,- | |||
}} |
Revision as of 15:36, 13 September 2013
Short description: | p@chr17:88512729..88512739, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:88512729..88512739, - |
Coexpression cluster: | MCL_coexpression_mm9:518 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 3.16e-07 | 6 |
double negative thymocyte | 3.16e-07 | 6 |
naive T cell | 3.16e-07 | 6 |
double-positive, alpha-beta thymocyte | 3.16e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 3.16e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.16e-07 | 6 |
DN4 thymocyte | 3.16e-07 | 6 |
DN1 thymic pro-T cell | 3.16e-07 | 6 |
DN2 thymocyte | 3.16e-07 | 6 |
DN3 thymocyte | 3.16e-07 | 6 |
immature single positive thymocyte | 3.16e-07 | 6 |
early T lineage precursor | 3.16e-07 | 6 |
mature CD4 single-positive thymocyte | 3.16e-07 | 6 |
resting double-positive thymocyte | 3.16e-07 | 6 |
double-positive blast | 3.16e-07 | 6 |
CD69-positive double-positive thymocyte | 3.16e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 3.16e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.16e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 3.16e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.