FFCP PHASE1:Mm9::chr7:139508941..139508962,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77590|HGNC=|UniProt=Q91XQ5|association_with_transcript=-30bp_to_ENSMUST00000080215_5end|description=CAGE_peak_2_at_Chst15_5end|id=chr7:139508941..139508962,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!3.43e-09!131;UBERON:0009142!3.43e-09!131;UBERON:0009569!2.46e-08!66;UBERON:0005177!9.34e-08!85;UBERON:0001041!9.35e-08!92;UBERON:0002048!7.98e-07!14;UBERON:0000117!7.98e-07!14;UBERON:0000171!7.98e-07!14;UBERON:0000170!7.98e-07!14;UBERON:0005597!7.98e-07!14;UBERON:0000118!7.98e-07!14;UBERON:0000077!9.97e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.27e-08,79;UBERON:0009569,2.14e-08,66;UBERON:0001041,1.42e-07,80;UBERON:0002048,7.22e-07,14;UBERON:0000117,7.22e-07,14;UBERON:0000171,7.22e-07,14;UBERON:0000170,7.22e-07,14;UBERON:0005597,7.22e-07,14;UBERON:0000118,7.22e-07,14|phase1_expression=8.48788889655408,0,0,0,0,0.16787927191189,0.467225281191051,5.93967287831251,15.0643932702283,18.4910975794375,2.22583358693156,3.82906363177615,3.42401459862411,4.89554253546385,8.32774404539157,7.08663435864391,1.39912375625629,33.5967206106523,40.4487579136929,44.1365237869951,2.55129870453209,3.67376519443276,2.35079810225042,3.35984087866154,1.60586496747019,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0.498703936075477,0.204169356262369,2.51118978442145,2.3440060335714,2.61761871986899,7.64700934440319,4.09827290975067,3.88408282424923,0,0.506884656097573,0.917733760808408,1.56478268869608,0,0.219686182734472,1.74986909166855,1.39986421625363,1.43752564364972,35.7376950902978,4.35217285206807,9.07453257684653,1.80081605225163,1.14613375975503,2.06268836910977,4.04632921719196,2.64495489636016,4.43681982454325,1.35537812827653,2.66788438833342,0,0,0,0,0.768436610643109,5.80661828927475,7.42532660824299,5.25812403378455,1.42825492201902,2.65042249141936,2.9397791811589,2.77951865952885,2.75765635983006,1.10115880999389,0.893811366596314,0.768032666281217,0.923204014111357,1.18933936683133,1.56274011167028,0.558365998002762,0,0.763991238884051,2.06240009831567,3.55929201997757,4.28718725398191,0.37863096666592,0.151143120213571,33.3344162006929,12.9063581547208,0,0,1.29955283489534,1.34408066129201,3.08977724289854,1.53387290320252,0.519572009205738,0.35333957451034,30.844708931093,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,3.65388415100992,23.0454716445983,7.86743337043571,4.3371331691534,4.26251669636998,5.76538743140146,6.17962826265753,5.99702406392095,3.89566433121994,8.89901883843746,6.07317299063629,13.2691582792481,2.42650274921114,10.1587098491781,7.75800405016355,3.72783522436244,1.46390398505774,2.30391377494801,4.08731288333746,3.59445373517761,2.99951365496704,2.54140454146129,1.19832511523858,2.28750301409313,2.38743269014442,1.91206752211504,1.79000820131231,1.24672826735736,1.29793010454206,2.74966282395854,14.0579876789405,1.0108910337347,1.26265113531884,1.95180664444056,3.90833577536904,2.88099407688559,1.50704817835715,2.85753296435577,1.5373646434182,2.34254311399322,3.3631438196072,2.80238390812695,5.10586416453112,8.09375171154165,5.91828477554452,6.67313398141435,3.83077383174383,3.90986059175093,3.98068533636986,0.702213187313235,1.28673953557358,1.42081749697796,0.207125772535502,0.703578179943289,0.540186184383045,1.42046841351126,1.77087808572663,1.54267112887378,1.39520366850245,1.3413670069981,2.10177616260905,1.81015834904829,4.26835406605648,3.97237166774693,4.67839959761063,5.48875288227627,2.68412837520744,3.78521907415429,5.24813523134351,0.330418782983798,1.05780226665418,13.4371597837197,6.96710015581316,7.34544529535932,9.07575860805041,8.45036566610507,6.46767128782701,1.89811624617805,6.91735609840846,6.28338022000674,6.96347652144028,5.8489226135736,3.59527763461689,2.80979464837102,2.19055400579804,2.65535061334314,3.31320686568214,3.38123207019241,2.44381593414377,3.87904974335251,3.22624771495465,7.52514791778662,5.46157547524528,7.84993639206874,4.93588655687202,4.15033677922008,3.33690211432188,1.96558995113203,2.24862112384854,2.02860121388503,3.85883455603867,3.8193877767213,6.61701116136864,9.07957269940198,5.49122826376163,8.62609239164127,8.93138274404408,9.04909252032226,2.77836765741823,2.33216637578486,3.85954817090694,14.7802552133284,2.84237117655727,6.51859905768104,5.94107800213158,8.91822943496308,10.5528942188344,13.0924002487308,5.46374214001837,7.09358148477859,7.30833475840957,5.42146213435456,14.5838350097007,8.46156411142888,11.5719246865209,0,0,3.93411418415229,4.41498794087572,1.12385412991454,1.05490517932983,0,3.28212205365685,0.94652465824877,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0.584511715822624,0,0.963963949265421,4.11626247103979,4.45164009168138,2.76907830901079,2.8044920905331,3.98235415019888,2.42780636154981,2.11626489875326,1.88605079755898,3.54362271456927,4.61152721915891,5.16856586336442,4.72593848320757,5.34746067577082,4.10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| ||
|EntrezGene=77590 | |||
|HGNC= | |||
|UniProt=Q91XQ5 | |||
|association_with_transcript=-30bp_to_ENSMUST00000080215_5end | |||
|description=CAGE_peak_2_at_Chst15_5end | |||
|id=chr7:139508941..139508962,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!3.43e-09!131;UBERON:0009142!3.43e-09!131;UBERON:0009569!2.46e-08!66;UBERON:0005177!9.34e-08!85;UBERON:0001041!9.35e-08!92;UBERON:0002048!7.98e-07!14;UBERON:0000117!7.98e-07!14;UBERON:0000171!7.98e-07!14;UBERON:0000170!7.98e-07!14;UBERON:0005597!7.98e-07!14;UBERON:0000118!7.98e-07!14;UBERON:0000077!9.97e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.27e-08,79;UBERON:0009569,2.14e-08,66;UBERON:0001041,1.42e-07,80;UBERON:0002048,7.22e-07,14;UBERON:0000117,7.22e-07,14;UBERON:0000171,7.22e-07,14;UBERON:0000170,7.22e-07,14;UBERON:0005597,7.22e-07,14;UBERON:0000118,7.22e-07,14 | |||
|phase1_expression=8.48788889655408,0,0,0,0,0.16787927191189,0.467225281191051,5.93967287831251,15.0643932702283,18.4910975794375,2.22583358693156,3.82906363177615,3.42401459862411,4.89554253546385,8.32774404539157,7.08663435864391,1.39912375625629,33.5967206106523,40.4487579136929,44.1365237869951,2.55129870453209,3.67376519443276,2.35079810225042,3.35984087866154,1.60586496747019,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0.498703936075477,0.204169356262369,2.51118978442145,2.3440060335714,2.61761871986899,7.64700934440319,4.09827290975067,3.88408282424923,0,0.506884656097573,0.917733760808408,1.56478268869608,0,0.219686182734472,1.74986909166855,1.39986421625363,1.43752564364972,35.7376950902978,4.35217285206807,9.07453257684653,1.80081605225163,1.14613375975503,2.06268836910977,4.04632921719196,2.64495489636016,4.43681982454325,1.35537812827653,2.66788438833342,0,0,0,0,0.768436610643109,5.80661828927475,7.42532660824299,5.25812403378455,1.42825492201902,2.65042249141936,2.9397791811589,2.77951865952885,2.75765635983006,1.10115880999389,0.893811366596314,0.768032666281217,0.923204014111357,1.18933936683133,1.56274011167028,0.558365998002762,0,0.763991238884051,2.06240009831567,3.55929201997757,4.28718725398191,0.37863096666592,0.151143120213571,33.3344162006929,12.9063581547208,0,0,1.29955283489534,1.34408066129201,3.08977724289854,1.53387290320252,0.519572009205738,0.35333957451034,30.844708931093,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,3.65388415100992,23.0454716445983,7.86743337043571,4.3371331691534,4.26251669636998,5.76538743140146,6.17962826265753,5.99702406392095,3.89566433121994,8.89901883843746,6.07317299063629,13.2691582792481,2.42650274921114,10.1587098491781,7.75800405016355,3.72783522436244,1.46390398505774,2.30391377494801,4.08731288333746,3.59445373517761,2.99951365496704,2.54140454146129,1.19832511523858,2.28750301409313,2.38743269014442,1.91206752211504,1.79000820131231,1.24672826735736,1.29793010454206,2.74966282395854,14.0579876789405,1.0108910337347,1.26265113531884,1.95180664444056,3.90833577536904,2.88099407688559,1.50704817835715,2.85753296435577,1.5373646434182,2.34254311399322,3.3631438196072,2.80238390812695,5.10586416453112,8.09375171154165,5.91828477554452,6.67313398141435,3.83077383174383,3.90986059175093,3.98068533636986,0.702213187313235,1.28673953557358,1.42081749697796,0.207125772535502,0.703578179943289,0.540186184383045,1.42046841351126,1.77087808572663,1.54267112887378,1.39520366850245,1.3413670069981,2.10177616260905,1.81015834904829,4.26835406605648,3.97237166774693,4.67839959761063,5.48875288227627,2.68412837520744,3.78521907415429,5.24813523134351,0.330418782983798,1.05780226665418,13.4371597837197,6.96710015581316,7.34544529535932,9.07575860805041,8.45036566610507,6.46767128782701,1.89811624617805,6.91735609840846,6.28338022000674,6.96347652144028,5.8489226135736,3.59527763461689,2.80979464837102,2.19055400579804,2.65535061334314,3.31320686568214,3.38123207019241,2.44381593414377,3.87904974335251,3.22624771495465,7.52514791778662,5.46157547524528,7.84993639206874,4.93588655687202,4.15033677922008,3.33690211432188,1.96558995113203,2.24862112384854,2.02860121388503,3.85883455603867,3.8193877767213,6.61701116136864,9.07957269940198,5.49122826376163,8.62609239164127,8.93138274404408,9.04909252032226,2.77836765741823,2.33216637578486,3.85954817090694,14.7802552133284,2.84237117655727,6.51859905768104,5.94107800213158,8.91822943496308,10.5528942188344,13.0924002487308,5.46374214001837,7.09358148477859,7.30833475840957,5.42146213435456,14.5838350097007,8.46156411142888,11.5719246865209,0,0,3.93411418415229,4.41498794087572,1.12385412991454,1.05490517932983,0,3.28212205365685,0.94652465824877,0,0.215423397732799,0.238968797952552,0.222798674082394,0,0,0.584511715822624,0,0.963963949265421,4.11626247103979,4.45164009168138,2.76907830901079,2.8044920905331,3.98235415019888,2.42780636154981,2.11626489875326,1.88605079755898,3.54362271456927,4.61152721915891,5.16856586336442,4.72593848320757,5.34746067577082,4.10847785316561,4.21674434299995,2.06271086496374,0.680879211507576,2.16073312837572,1.94038025674132,4.07240366560025,2.83744373827638,3.38900753443934,4.11372551505302,3.04464949114599,0.469343416127421,0.847328283455281,0.661585194164886,2.30840754118072,3.71368181400583,3.79971427047382,2.98430860007841,3.11867709515616,3.78925087618806,1.29797711407357,10.2522528478712,8.66824845445534,17.0378965180135,8.09984365120171,15.5831419601969,13.4979122191848,4.9293744698218,3.63873776041511,3.73139929271944,4.77335309007557,12.1789357528737,8.74273708645449,5.72428306355547,5.22720740036172,5.8957892211468,5.12484516262319,5.78574190077352,3.66458318777641,1.94422459937689,4.34937519160848,0,3.58839710505549,5.29467169462712,1.75006069509643,2.45403664607689,1.68956125490778,2.22978753426933,1.8228613878153,1.36317147753424,0,0.576060012515731,3.47612232690996,3.85177909051312,4.00572732942826,3.50786222040047,3.93858730468459,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| |||
|short_description=p2@Chst15 | |||
}} | |||
Revision as of 12:05, 14 September 2013
| Short description: | p2@Chst15 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Chst15_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -30bp_to_ENSMUST00000080215_5end |
| EntrezGene: | Chst15 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trunk region element | 1.27e-08 | 79 |
| subdivision of trunk | 2.14e-08 | 66 |
| foregut | 1.42e-07 | 80 |
| lung | 7.22e-07 | 14 |
| respiratory tube | 7.22e-07 | 14 |
| respiration organ | 7.22e-07 | 14 |
| pair of lungs | 7.22e-07 | 14 |
| lung primordium | 7.22e-07 | 14 |
| lung bud | 7.22e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
