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FFCP PHASE1:Mm9::chr14:55513415..55513464,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=54196|HGNC=|UniProt=D3Z055,G3UWS5|association_with_transcript=0bp_to_ENSMUST00000139985,ENSMUST00000172557_5end|description=CAGE_peak_2_at_Pabpn1_5end|id=chr14:55513415..55513464,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!2.24e-09!24;UBERON:0005156!5.17e-09!26;UBERON:0000990!5.17e-09!26;UBERON:0000991!8.07e-09!18;UBERON:0005564!8.07e-09!18;UBERON:0004176!3.19e-08!17;UBERON:0009196!3.19e-08!17;UBERON:0009117!3.19e-08!17;UBERON:0003135!1.97e-07!15;UBERON:0003101!5.34e-07!16;UBERON:0000079!5.34e-07!16;UBERON:0000473!6.00e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0003133,2.42e-09,24;UBERON:0005156,5.55e-09,26;UBERON:0000990,5.55e-09,26;UBERON:0000991,9.08e-09,18;UBERON:0005564,9.08e-09,18;UBERON:0004176,3.62e-08,17;UBERON:0009196,3.62e-08,17;UBERON:0009117,3.62e-08,17;UBERON:0003135,2.28e-07,15;UBERON:0003101,6.12e-07,16;UBERON:0000079,6.12e-07,16;UBERON:0000473,7.01e-07,14|phase1_expression=2.7225304007815,3.48975407639361,1.81999695755814,1.81478526784098,1.00179145989269,4.36486106970913,5.84031601488814,0,1.40788722151667,2.34064526321993,1.02730780935303,1.99430397488341,0.171200729931206,0.0874204024189974,0.666219523631325,1.21485160433896,0,0,0.274228867211478,0.84877930359606,3.57181818634493,2.48227378002213,2.08959831311148,2.87986361028132,1.60586496747019,2.29692785646008,2.15380998079537,4.09395342103189,0.950117097281869,1.51218077855958,3.10422714917427,0.635030673459631,1.23012957516914,0,1.1554064790051,1.16364251750945,2.85837098767317,0,0,0.523523743973798,0,0,0,1.76255545165808,1.01376931219515,3.12029478674859,3.12956537739216,3.2703773457067,2.85592037554813,1.74986909166855,3.21968769738334,4.31257693094915,0.503347818173209,0,0,2.82985379639542,0.85960031981627,3.09403255366465,3.23706337375356,2.11596391708813,1.90149421051854,4.06613438482959,3.55717918444456,0.899899717281399,0,3.5524005747305,0.898800331555214,1.15265491596466,3.21437798156281,2.43010688997043,1.89292465216244,3.99911378165325,2.87129103237098,2.81728838194394,3.83381884072945,1.83843757322004,1.10115880999389,2.29837208553338,1.0752457327937,5.14356522147756,5.6722339033494,4.16730696445408,2.79182999001381,1.12552522006336,2.59757021220577,2.06240009831567,2.70506193518296,4.28718725398191,3.63485727999283,3.09843396437821,0,3.44169550792555,0.679971333707751,4.31762553310254,7.79731700937203,1.34408066129201,1.12355536105401,2.72688516124892,4.93593408745451,3.18005617059306,3.38024207464033,0,0,0,1.94841936910093,3.80039798212648,2.02209778005913,1.48439043634778,1.03575153458869,2.67195850316685,2.94925055502431,2.43572382649713,2.99800146432876,2.86373017049983,3.29248379979973,1.75933227861546,1.48316980640624,0.433798070759735,0.884610551949874,1.13236794963186,0.662524555381181,2.42437626567611,0,0.585561594023094,0.209446706813455,0.510914110417183,2.75574786363617,1.19980546198682,1.14363204365758,3.14560342750128,1.37250180845588,2.51308704225729,2.08589184230732,2.81287003063364,2.0778804455956,2.59586020908412,3.1570202793598,0.746441823660558,5.05445516867349,0.420883711772948,2.60240885925407,2.5289231487682,2.34080768746954,2.26057226753573,2.10913147369116,3.07472928683639,1.78033276663485,0.258703370739016,2.58681591519411,4.53854592402766,3.69497360744293,3.28793598641362,3.05851974148158,1.74126083261083,1.02891068203972,6.96619933864726,2.1066395619397,2.57347907114715,1.42081749697796,3.10688658803253,2.57978665979206,2.34080679899319,2.3674473558521,1.18058539048442,2.1597395804233,1.86027155800326,0.268273401399619,0.700592054203017,0.658239399653922,0.492502392237286,0.162137619091711,0.146199987425332,0.439100230582101,0,1.89260953707715,3.60166143327496,1.32167513193519,2.90895623329899,4.47905326123991,5.80591679651096,3.73715637834071,5.44545516483025,3.11329261382818,2.85338439168839,0,1.64698954724011,1.50801125280162,1.39269530428806,0.974820435595601,0.898819408654221,1.51296634912286,1.39398891278057,9.86273084956025,4.45569199177942,6.76246414038483,3.86937522906097,3.87904974335251,3.71719845418688,3.03535378196435,1.91893192373483,1.8839847340965,1.48076596706161,1.1858105083486,2.16898637430922,1.96558995113203,2.69834534861824,2.02860121388503,2.17059443777175,1.78238096246994,2.5892652370573,2.59416362840057,5.21666685057355,8.62609239164127,4.09355042435354,6.55279113540577,6.31447194867779,5.38192240565737,3.85954817090694,0.184753190166605,3.7898282354097,1.79261474086228,2.03694102930226,3.28566347603903,1.17254380209271,0.238043640886014,0.780534591431195,0.788175720530955,0.44292937929755,0.637819074629948,0.655453258862952,0.172684981865896,0.433947175744535,0,0.54390568381871,1.96705709207614,0.551873492609465,2.88991061978026,2.69586879162067,3.77050374366353,0,3.15508219416257,6.24701990874622,4.30846795465598,3.10659437338318,3.56477878531831,3.96307143104365,4.85772842009873,4.38383786866968,3.16230222357219,1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|EntrezGene=54196
|HGNC=
|UniProt=D3Z055,G3UWS5
|association_with_transcript=0bp_to_ENSMUST00000139985,ENSMUST00000172557_5end
|description=CAGE_peak_2_at_Pabpn1_5end
|id=chr14:55513415..55513464,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003133!2.24e-09!24;UBERON:0005156!5.17e-09!26;UBERON:0000990!5.17e-09!26;UBERON:0000991!8.07e-09!18;UBERON:0005564!8.07e-09!18;UBERON:0004176!3.19e-08!17;UBERON:0009196!3.19e-08!17;UBERON:0009117!3.19e-08!17;UBERON:0003135!1.97e-07!15;UBERON:0003101!5.34e-07!16;UBERON:0000079!5.34e-07!16;UBERON:0000473!6.00e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0003133,2.42e-09,24;UBERON:0005156,5.55e-09,26;UBERON:0000990,5.55e-09,26;UBERON:0000991,9.08e-09,18;UBERON:0005564,9.08e-09,18;UBERON:0004176,3.62e-08,17;UBERON:0009196,3.62e-08,17;UBERON:0009117,3.62e-08,17;UBERON:0003135,2.28e-07,15;UBERON:0003101,6.12e-07,16;UBERON:0000079,6.12e-07,16;UBERON:0000473,7.01e-07,14
|phase1_expression=2.7225304007815,3.48975407639361,1.81999695755814,1.81478526784098,1.00179145989269,4.36486106970913,5.84031601488814,0,1.40788722151667,2.34064526321993,1.02730780935303,1.99430397488341,0.171200729931206,0.0874204024189974,0.666219523631325,1.21485160433896,0,0,0.274228867211478,0.84877930359606,3.57181818634493,2.48227378002213,2.08959831311148,2.87986361028132,1.60586496747019,2.29692785646008,2.15380998079537,4.09395342103189,0.950117097281869,1.51218077855958,3.10422714917427,0.635030673459631,1.23012957516914,0,1.1554064790051,1.16364251750945,2.85837098767317,0,0,0.523523743973798,0,0,0,1.76255545165808,1.01376931219515,3.12029478674859,3.12956537739216,3.2703773457067,2.85592037554813,1.74986909166855,3.21968769738334,4.31257693094915,0.503347818173209,0,0,2.82985379639542,0.85960031981627,3.09403255366465,3.23706337375356,2.11596391708813,1.90149421051854,4.06613438482959,3.55717918444456,0.899899717281399,0,3.5524005747305,0.898800331555214,1.15265491596466,3.21437798156281,2.43010688997043,1.89292465216244,3.99911378165325,2.87129103237098,2.81728838194394,3.83381884072945,1.83843757322004,1.10115880999389,2.29837208553338,1.0752457327937,5.14356522147756,5.6722339033494,4.16730696445408,2.79182999001381,1.12552522006336,2.59757021220577,2.06240009831567,2.70506193518296,4.28718725398191,3.63485727999283,3.09843396437821,0,3.44169550792555,0.679971333707751,4.31762553310254,7.79731700937203,1.34408066129201,1.12355536105401,2.72688516124892,4.93593408745451,3.18005617059306,3.38024207464033,0,0,0,1.94841936910093,3.80039798212648,2.02209778005913,1.48439043634778,1.03575153458869,2.67195850316685,2.94925055502431,2.43572382649713,2.99800146432876,2.86373017049983,3.29248379979973,1.75933227861546,1.48316980640624,0.433798070759735,0.884610551949874,1.13236794963186,0.662524555381181,2.42437626567611,0,0.585561594023094,0.209446706813455,0.510914110417183,2.75574786363617,1.19980546198682,1.14363204365758,3.14560342750128,1.37250180845588,2.51308704225729,2.08589184230732,2.81287003063364,2.0778804455956,2.59586020908412,3.1570202793598,0.746441823660558,5.05445516867349,0.420883711772948,2.60240885925407,2.5289231487682,2.34080768746954,2.26057226753573,2.10913147369116,3.07472928683639,1.78033276663485,0.258703370739016,2.58681591519411,4.53854592402766,3.69497360744293,3.28793598641362,3.05851974148158,1.74126083261083,1.02891068203972,6.96619933864726,2.1066395619397,2.57347907114715,1.42081749697796,3.10688658803253,2.57978665979206,2.34080679899319,2.3674473558521,1.18058539048442,2.1597395804233,1.86027155800326,0.268273401399619,0.700592054203017,0.658239399653922,0.492502392237286,0.162137619091711,0.146199987425332,0.439100230582101,0,1.89260953707715,3.60166143327496,1.32167513193519,2.90895623329899,4.47905326123991,5.80591679651096,3.73715637834071,5.44545516483025,3.11329261382818,2.85338439168839,0,1.64698954724011,1.50801125280162,1.39269530428806,0.974820435595601,0.898819408654221,1.51296634912286,1.39398891278057,9.86273084956025,4.45569199177942,6.76246414038483,3.86937522906097,3.87904974335251,3.71719845418688,3.03535378196435,1.91893192373483,1.8839847340965,1.48076596706161,1.1858105083486,2.16898637430922,1.96558995113203,2.69834534861824,2.02860121388503,2.17059443777175,1.78238096246994,2.5892652370573,2.59416362840057,5.21666685057355,8.62609239164127,4.09355042435354,6.55279113540577,6.31447194867779,5.38192240565737,3.85954817090694,0.184753190166605,3.7898282354097,1.79261474086228,2.03694102930226,3.28566347603903,1.17254380209271,0.238043640886014,0.780534591431195,0.788175720530955,0.44292937929755,0.637819074629948,0.655453258862952,0.172684981865896,0.433947175744535,0,0.54390568381871,1.96705709207614,0.551873492609465,2.88991061978026,2.69586879162067,3.77050374366353,0,3.15508219416257,6.24701990874622,4.30846795465598,3.10659437338318,3.56477878531831,3.96307143104365,4.85772842009873,4.38383786866968,3.16230222357219,1.92792789853084,6.38730383437209,5.52003371368491,3.25773918707152,2.8044920905331,1.32745138339963,3.8844901784797,5.13950046840077,3.58349651536206,3.54362271456927,1.53717573971964,3.10113951801865,2.90826983582004,4.9909632973861,2.84433082142234,1.05418608574999,5.15677716240934,1.02131881726136,2.70091641046965,2.8458910432206,1.71469628025274,4.78818630834139,2.67553226403106,1.81003922662333,0.913394847343798,4.4587624532105,6.77862626764225,1.98475558249466,0.49465875882444,0.968786560175433,1.5078231232039,0.596861720015682,1.31312719796049,1.1659233465194,2.03967832211561,0.512612642393558,1.857481811669,1.48155621895769,1.31857919903284,1.23024804948923,1.60144721244566,1.5298058699447,1.95932033253121,1.38199973804424,0,4.74503990371703,3.45643094115643,3.99619761040665,2.92723614420256,2.62035076495413,2.02296519577231,1.90102948168273,1.83229159388821,0.777689839750757,1.86401793926078,6.76431526421028,11.2137409532984,9.10021697514037,7.77804753376191,6.07051170345336,8.61676240002969,13.2613679669702,18.358818262997,22.7544777403793,14.4950472495604,10.0810502190253,0.316011120628178,2.22997736819181,2.87590680061516,1.16928740680016,1.25318686967237,0.39736270956253,1.08175904567972,0.590758108698309,1.00966449948148,0.457240839929999,0.705783295957884,0.292373642219257,0.769694733122636,0.584384510907845,1.36038230169127,2.66383144048878,7.71539166841491,9.23365390002431,0.772758376128762,2.81523713176773,2.19781949120718,1.50057865355346,2.00628841614145,3.3885110557024,1.84130094602871,2.86447756719698,0.68741272937475,2.74033007908257,1.5107877947794,2.02506750069542,2.2516060161211,0.906284817968409,2.5888015587591,1.97195960409936,1.99512436700516,4.78054096111576,5.34834777550247,2.09613162627982,1.65459157605013,1.55572709461131,3.29656091582231,2.56735367673452,0.758091635291392,2.5347929989024,2.64076877940507,2.90288673156635,3.26528277264833,2.87177344778066,3.33405583898152,2.20180219295225,3.8581844092741,2.06042950401653,3.82717192349433,1.37147700954166,1.24233064311536,2.86123427936785,1.74415699958794,2.1645157495526,2.45382362885862,2.37806364734604,2.36762740294059,2.17286582153379,2.80571135828869,1.89816028998679,1.77308068276014,2.04615521584845,2.47898945897546,0.771626443924566,1.99848462350357,2.33931608445408,2.36358159453128,1.72159498861959,0.220591419119515,0.927471342481686
|short_description=p2@Pabpn1
}}

Revision as of 02:26, 13 September 2013

Short description:p2@Pabpn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pabpn1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000139985, ENSMUST00000172557_5end
EntrezGene:Pabpn1
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p2@Pabpn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I24.09
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D93.63
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.60
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C62.11
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D83.74
intestine, embryo E16.CNhs10585.463-22H45.45
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I99.86
kidney, embryo E15.CNhs10997.434-16F84.46
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G73.72
kidney, neonate N10.CNhs11206.758-6D53.04
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B96.55
liver, neonate N20.CNhs11220.823-25A36.31
liver, neonate N25.CNhs11198.1368-26H15.38
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G36.78
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.51
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.75
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D44.00
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F511.21
testis, embryo E15.CNhs11034.443-27C59.10
testis, embryo E16.CNhs11033.470-26G57.78
testis, embryo E17.CNhs11029.486-18I56.07
testis, embryo E18.CNhs11027.503-18G58.62
testis, neonate N00.CNhs11189.1300-22B713.26
testis, neonate N07.CNhs11222.726-26I418.36
testis, neonate N10.CNhs11204.763-44D922.75
testis, neonate N20.CNhs11110.839-18H314.50
testis, neonate N30.CNhs11130.1391-42E210.08
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I22.88
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.23
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
reproductive organ2.42e-0924
reproductive structure5.55e-0926
reproductive system5.55e-0926
gonad9.08e-0918
gonad primordium9.08e-0918
external genitalia3.62e-0817
indifferent external genitalia3.62e-0817
indifferent gonad3.62e-0817
male reproductive organ2.28e-0715
male organism6.12e-0716
male reproductive system6.12e-0716
testis7.01e-0714







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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