FFCP PHASE1:Mm9::chr1:72330822..72330840,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=111175|HGNC=|MCL_coexpression_id=8|UniProt=Q3UXD9,D6RHN4|association_with_transcript=0bp_to_ENSMUST00000097698,ENSMUST00000134840_5end|description=CAGE_peak_1_at_Pecr_5end|id=chr1:72330822..72330840,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!2.03e-12!25;UBERON:0002330!2.03e-12!25;UBERON:0005172!3.76e-12!49;UBERON:0005173!3.76e-12!49;UBERON:0002417!3.76e-12!49;UBERON:0000916!3.76e-12!49;UBERON:0002107!6.48e-12!22;UBERON:0007499!6.48e-12!22;UBERON:0006925!6.48e-12!22;UBERON:0009497!6.48e-12!22;UBERON:0000015!6.48e-12!22;UBERON:0002423!6.48e-12!22;UBERON:0006235!6.48e-12!22;UBERON:0008835!6.48e-12!22;UBERON:0003894!6.48e-12!22;UBERON:0004161!6.48e-12!22;UBERON:0008836!6.48e-12!22;UBERON:0009854!9.73e-11!23;UBERON:0009856!9.73e-11!23;UBERON:0000160!3.29e-10!43;UBERON:0002108!1.00e-08!16;UBERON:0005409!1.12e-08!59;UBERON:0005256!6.14e-08!47;UBERON:0001264!2.27e-07!12;UBERON:0003922!2.27e-07!12;UBERON:0002114!2.27e-07!12;UBERON:0003923!2.27e-07!12;UBERON:0003924!2.27e-07!12;UBERON:0003921!2.27e-07!12;UBERON:0005177!3.39e-07!85;UBERON:0003914!3.91e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.03e-12,25;UBERON:0002330,2.03e-12,25;UBERON:0005172,3.76e-12,49;UBERON:0005173,3.76e-12,49;UBERON:0002417,3.76e-12,49;UBERON:0000916,3.76e-12,49;UBERON:0002107,6.48e-12,22;UBERON:0007499,6.48e-12,22;UBERON:0006925,6.48e-12,22;UBERON:0009497,6.48e-12,22;UBERON:0000015,6.48e-12,22;UBERON:0002423,6.48e-12,22;UBERON:0006235,6.48e-12,22;UBERON:0008835,6.48e-12,22;UBERON:0003894,6.48e-12,22;UBERON:0004161,6.48e-12,22;UBERON:0008836,6.48e-12,22;UBERON:0009854,9.73e-11,23;UBERON:0009856,9.73e-11,23;UBERON:0003104,1.83e-10,61;UBERON:0009142,1.83e-10,61;UBERON:0005177,1.67e-09,79;UBERON:0002100,1.35e-07,90;UBERON:0005256,2.10e-07,45;UBERON:0001264,2.27e-07,12;UBERON:0003914,3.91e-07,47|phase1_expression=20.4990524294136,5.93258192986914,8.64498554840118,13.0059610861937,9.5170188689806,14.6054966563344,14.7175963575181,2.32421982194837,1.83025338797167,0.70219357896598,11.9852577757853,10.6894693053751,1.71200729931206,1.31130603628496,6.66219523631325,3.84703008040669,7.69518065940961,2.68142840554502,5.07323404341233,5.09267582157636,45.6682468111245,0.992909512008853,0.522399578277871,7.51964387129011,8.48814339948529,12.6331032105304,9.47676391549965,7.97243560937789,38.7647775691003,22.6827116783938,16.8515188098032,8.89042942843484,4.30545351309199,15.8481681015439,31.7736781726402,28.0936550655852,33.4837744270285,0,0.7813353445238,1.57057123192139,0.588231488031014,0,0.485510353031154,12.3378881616066,11.3542162965856,11.9305388905093,11.7358701652206,6.5407546914134,6.59058548203415,7.58276606389705,7.55926676776958,7.18762821824858,1.8456086666351,2.17608642603403,2.35265659399725,8.2323019531503,8.30946975822394,6.70373719960675,2.02316460859598,3.1739458756322,1.26766280701236,7.45457970552091,8.00365316500025,6.29929802096979,7.9109309005358,7.8152812644071,7.49000276296012,5.76327457982332,4.04389488003063,3.10513658162888,2.94454945891935,4.28476476605705,5.52171352379034,3.1847607795888,3.73797336971122,5.51531271966013,12.1127469099328,4.21368215681119,4.14737639791857,2.37395317914349,1.64677758484337,2.08365348222704,5.58365998002762,7.87867654044352,3.66715794664344,2.94628585473668,4.27115042397309,2.42319279572891,4.92220256665696,4.23200736597999,6.95674772884027,448.280839907302,172.032747428061,522.972392697045,485.382983833409,393.815633758558,134.68619890635,10.9075406449957,12.7295142255406,9.54016851177919,16.760366953425,8.98285341900225,20.3844191765317,7.11066703153331,4.5463118612355,3.80039798212648,2.52762222507392,199.136686230041,4.14300613835475,11.5784868470563,11.1030609130327,10.3518262626128,13.6063143381075,14.1679282119465,12.346814249249,18.598655516792,20.2699873542187,23.8588938917854,1.76922110389975,8.8971767471075,9.27534377533653,9.21262980956922,3.72783522436244,3.51336956413857,2.93225389538837,9.96282515313506,5.27186547826049,2.39961092397363,5.33694953706872,3.89455662452539,5.03250663100489,3.76963056338593,4.17178368461463,4.60287823194595,2.90903262383384,5.02947915510049,11.915205570487,6.71797641294502,11.3725241295154,19.1502088856691,10.4096354370163,11.0353010128067,6.48223667299257,11.0014517020072,6.46346741937615,8.07116437794554,5.24729657534481,9.8307280880826,7.32931175971664,11.9136830505726,10.7330185740009,8.76782929710299,13.9023624612799,9.75106066262066,13.1700567301084,12.7381930763836,7.02213187313235,5.91900186363845,5.68326998791185,6.00664740352955,10.5536726991493,7.20248245844059,7.10234206755631,7.47704080640135,5.55361606394562,7.20855228726264,9.12129564758705,9.80828875884224,10.8609500942897,7.88003827579657,11.0253580982364,11.2573990317506,14.9294078397914,9.5286557319864,4.6263788684108,5.04232600658494,7.26921322564356,15.6025834331491,11.5175655289026,10.4506502337197,10.1805294444454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| ||
|EntrezGene=111175 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q3UXD9,D6RHN4 | |||
|association_with_transcript=0bp_to_ENSMUST00000097698,ENSMUST00000134840_5end | |||
|description=CAGE_peak_1_at_Pecr_5end | |||
|id=chr1:72330822..72330840,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!2.03e-12!25;UBERON:0002330!2.03e-12!25;UBERON:0005172!3.76e-12!49;UBERON:0005173!3.76e-12!49;UBERON:0002417!3.76e-12!49;UBERON:0000916!3.76e-12!49;UBERON:0002107!6.48e-12!22;UBERON:0007499!6.48e-12!22;UBERON:0006925!6.48e-12!22;UBERON:0009497!6.48e-12!22;UBERON:0000015!6.48e-12!22;UBERON:0002423!6.48e-12!22;UBERON:0006235!6.48e-12!22;UBERON:0008835!6.48e-12!22;UBERON:0003894!6.48e-12!22;UBERON:0004161!6.48e-12!22;UBERON:0008836!6.48e-12!22;UBERON:0009854!9.73e-11!23;UBERON:0009856!9.73e-11!23;UBERON:0000160!3.29e-10!43;UBERON:0002108!1.00e-08!16;UBERON:0005409!1.12e-08!59;UBERON:0005256!6.14e-08!47;UBERON:0001264!2.27e-07!12;UBERON:0003922!2.27e-07!12;UBERON:0002114!2.27e-07!12;UBERON:0003923!2.27e-07!12;UBERON:0003924!2.27e-07!12;UBERON:0003921!2.27e-07!12;UBERON:0005177!3.39e-07!85;UBERON:0003914!3.91e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.03e-12,25;UBERON:0002330,2.03e-12,25;UBERON:0005172,3.76e-12,49;UBERON:0005173,3.76e-12,49;UBERON:0002417,3.76e-12,49;UBERON:0000916,3.76e-12,49;UBERON:0002107,6.48e-12,22;UBERON:0007499,6.48e-12,22;UBERON:0006925,6.48e-12,22;UBERON:0009497,6.48e-12,22;UBERON:0000015,6.48e-12,22;UBERON:0002423,6.48e-12,22;UBERON:0006235,6.48e-12,22;UBERON:0008835,6.48e-12,22;UBERON:0003894,6.48e-12,22;UBERON:0004161,6.48e-12,22;UBERON:0008836,6.48e-12,22;UBERON:0009854,9.73e-11,23;UBERON:0009856,9.73e-11,23;UBERON:0003104,1.83e-10,61;UBERON:0009142,1.83e-10,61;UBERON:0005177,1.67e-09,79;UBERON:0002100,1.35e-07,90;UBERON:0005256,2.10e-07,45;UBERON:0001264,2.27e-07,12;UBERON:0003914,3.91e-07,47 | |||
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| |||
|short_description=p1@Pecr | |||
}} |
Revision as of 20:51, 13 September 2013
Short description: | p1@Pecr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pecr_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000097698, ENSMUST00000134840_5end |
EntrezGene: | Pecr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 2.03e-12 | 25 |
exocrine system | 2.03e-12 | 25 |
abdomen element | 3.76e-12 | 49 |
abdominal segment element | 3.76e-12 | 49 |
abdominal segment of trunk | 3.76e-12 | 49 |
abdomen | 3.76e-12 | 49 |
liver | 6.48e-12 | 22 |
epithelial sac | 6.48e-12 | 22 |
digestive gland | 6.48e-12 | 22 |
epithelium of foregut-midgut junction | 6.48e-12 | 22 |
anatomical boundary | 6.48e-12 | 22 |
hepatobiliary system | 6.48e-12 | 22 |
foregut-midgut junction | 6.48e-12 | 22 |
hepatic diverticulum | 6.48e-12 | 22 |
liver primordium | 6.48e-12 | 22 |
septum transversum | 6.48e-12 | 22 |
liver bud | 6.48e-12 | 22 |
digestive tract diverticulum | 9.73e-11 | 23 |
sac | 9.73e-11 | 23 |
mesenchyme | 1.83e-10 | 61 |
entire embryonic mesenchyme | 1.83e-10 | 61 |
trunk region element | 1.67e-09 | 79 |
trunk | 1.35e-07 | 90 |
trunk mesenchyme | 2.10e-07 | 45 |
pancreas | 2.27e-07 | 12 |
epithelial tube | 3.91e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.