FFCP PHASE1:Mm9::chr7:148021447..148021512,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76974|HGNC=|MCL_coexpression_id=8|UniProt=Q9CRB3|association_with_transcript=52bp_to_NM_029821,uc009kif.1_5end|description=CAGE_peak_1_at_1190003J15Rik_5end|id=chr7:148021447..148021512,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!2.82e-15!25;UBERON:0002330!2.82e-15!25;UBERON:0002107!2.26e-13!22;UBERON:0007499!2.26e-13!22;UBERON:0006925!2.26e-13!22;UBERON:0009497!2.26e-13!22;UBERON:0000015!2.26e-13!22;UBERON:0002423!2.26e-13!22;UBERON:0006235!2.26e-13!22;UBERON:0008835!2.26e-13!22;UBERON:0003894!2.26e-13!22;UBERON:0004161!2.26e-13!22;UBERON:0008836!2.26e-13!22;UBERON:0009854!2.69e-12!23;UBERON:0009856!2.69e-12!23;UBERON:0001007!7.00e-08!128;UBERON:0001555!7.00e-08!128;UBERON:0007026!7.00e-08!128;UBERON:0004921!1.52e-07!126;UBERON:0004185!1.52e-07!126;UBERON:0005256!1.87e-07!47;UBERON:0004119!2.20e-07!130;UBERON:0000925!2.20e-07!130;UBERON:0006595!2.20e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002365,9.30e-21,25;UBERON:0002330,9.30e-21,25;UBERON:0002107,7.58e-18,22;UBERON:0007499,7.58e-18,22;UBERON:0006925,7.58e-18,22;UBERON:0009497,7.58e-18,22;UBERON:0000015,7.58e-18,22;UBERON:0002423,7.58e-18,22;UBERON:0006235,7.58e-18,22;UBERON:0008835,7.58e-18,22;UBERON:0003894,7.58e-18,22;UBERON:0004161,7.58e-18,22;UBERON:0008836,7.58e-18,22;UBERON:0009854,9.22e-17,23;UBERON:0009856,9.22e-17,23;UBERON:0005256,4.42e-10,45;UBERON:0005177,1.12e-07,79;UBERON:0005172,3.74e-07,49;UBERON:0005173,3.74e-07,49;UBERON:0002417,3.74e-07,49;UBERON:0000916,3.74e-07,49|phase1_expression=0.80074423552397,0,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.47997726838022,0.91763712426868,0,0.430761996159075,0.430942465371778,0.570070258369122,0,0.886922042621219,0,0,0,0.288851619751275,1.16364251750945,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,0,0,0.579728977403356,863.865572489312,755.448151749311,1002.22882687143,769.33527825804,776.87862222678,169.656859519156,0,0,0,0.704217098883403,0,0,0,2.16491041011214,1.01343946190039,1.01104889002957,204.274960817398,0,1.33597925158342,0,0.608930956624282,0.691846491768175,1.50722640552623,2.93971767839262,2.63899841792318,0.494389935468748,0,0,0,0.220841518460394,0,0,0,0,0.766371165625774,0,0,0,0.149790639404823,0,0,0,0,0,0.324482526135515,0.101839363850316,0,0,7.15502310014011,0,0,0,0.753524089178575,0.0680364991513279,0,0,2.58703370739016,0,0,0,0,0,0.348252166522167,0.823128545631774,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0.292399974850665,0,0.134206418760372,0,0,0.991256348951394,1.32225283331772,0,0,0,0,0.22237804384487,1.71203063501303,0.949058123089023,0.164698954724011,0.754005626400808,0.397912944082302,1.16978452271472,0,0.648414149624083,0.995706366271836,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.442830443938806,0.156998727841375,0,723.64086271973,0,0.589676985339609,2.47348323623339,2.43432145666204,3.37648023653384,9.16653066413111,82.8564875858335,161.97309154826,253.145622959411,87.6986059816863,206.910366903688,292.379299708343,350.074324834697,616.768307688334,482.443521363367,0.184753190166605,0,0,0,0,0,1.19021820443007,0.780534591431195,0.157635144106191,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,5.4094070032094,6.62248191131358,0,0,0,0,1.26203287766503,0,0,0,0.445597348164788,0.566153061577665,0.809621403349789,0,0,0,0,2.49291845134157,0,0.164970122972535,2.65490276679926,0.242780636154981,0.302323556964751,1.13163047853539,0.295301892880773,0.307435147943927,0.258428293168221,1.81766864738753,1.78248689192361,5.05658812697306,4.21674434299995,6.18813259489121,0,0,0,0,0,0,0,0,0,0,0.661585194164886,1.48397627647332,0.484393280087717,0.663442174209714,1.67121281604391,2.29797259643086,0.582961673259701,0,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0,0.324016022465404,0.209088296014469,0.87345025498471,8.09186078308924,15.0429289420111,1.30877970992015,1.03691978633434,4.34937519160848,0,0,0,0.388902376688095,0,0.168956125490778,0,1.8228613878153,0.104859344425711,0,0,0.632022241256357,0,0.205421914329655,0,0,0,0.120195449519969,0,0,0.15241361331,0,0,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,2.12508553435409,0.563047426353546,0.36630324853453,1.92931541171159,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.512200817262403,0.729320151204882,1.04806581313991,2.38996560985018,3.33370091702423,2.47242068686673,2.56735367673452,5.05394423527595,4.56262739802432,3.2066478035633,3.7456602987953,3.39333307745807,2.98664438569189,2.38146845641537,2.66533949673168,3.47236596834669,3.70877310722976,1.91358596174717,3.42869252385415,2.6621370923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| ||
|EntrezGene=76974 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q9CRB3 | |||
|association_with_transcript=52bp_to_NM_029821,uc009kif.1_5end | |||
|description=CAGE_peak_1_at_1190003J15Rik_5end | |||
|id=chr7:148021447..148021512,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!2.82e-15!25;UBERON:0002330!2.82e-15!25;UBERON:0002107!2.26e-13!22;UBERON:0007499!2.26e-13!22;UBERON:0006925!2.26e-13!22;UBERON:0009497!2.26e-13!22;UBERON:0000015!2.26e-13!22;UBERON:0002423!2.26e-13!22;UBERON:0006235!2.26e-13!22;UBERON:0008835!2.26e-13!22;UBERON:0003894!2.26e-13!22;UBERON:0004161!2.26e-13!22;UBERON:0008836!2.26e-13!22;UBERON:0009854!2.69e-12!23;UBERON:0009856!2.69e-12!23;UBERON:0001007!7.00e-08!128;UBERON:0001555!7.00e-08!128;UBERON:0007026!7.00e-08!128;UBERON:0004921!1.52e-07!126;UBERON:0004185!1.52e-07!126;UBERON:0005256!1.87e-07!47;UBERON:0004119!2.20e-07!130;UBERON:0000925!2.20e-07!130;UBERON:0006595!2.20e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,9.30e-21,25;UBERON:0002330,9.30e-21,25;UBERON:0002107,7.58e-18,22;UBERON:0007499,7.58e-18,22;UBERON:0006925,7.58e-18,22;UBERON:0009497,7.58e-18,22;UBERON:0000015,7.58e-18,22;UBERON:0002423,7.58e-18,22;UBERON:0006235,7.58e-18,22;UBERON:0008835,7.58e-18,22;UBERON:0003894,7.58e-18,22;UBERON:0004161,7.58e-18,22;UBERON:0008836,7.58e-18,22;UBERON:0009854,9.22e-17,23;UBERON:0009856,9.22e-17,23;UBERON:0005256,4.42e-10,45;UBERON:0005177,1.12e-07,79;UBERON:0005172,3.74e-07,49;UBERON:0005173,3.74e-07,49;UBERON:0002417,3.74e-07,49;UBERON:0000916,3.74e-07,49 | |||
|phase1_expression=0.80074423552397,0,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.47997726838022,0.91763712426868,0,0.430761996159075,0.430942465371778,0.570070258369122,0,0.886922042621219,0,0,0,0.288851619751275,1.16364251750945,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,0,0,0.579728977403356,863.865572489312,755.448151749311,1002.22882687143,769.33527825804,776.87862222678,169.656859519156,0,0,0,0.704217098883403,0,0,0,2.16491041011214,1.01343946190039,1.01104889002957,204.274960817398,0,1.33597925158342,0,0.608930956624282,0.691846491768175,1.50722640552623,2.93971767839262,2.63899841792318,0.494389935468748,0,0,0,0.220841518460394,0,0,0,0,0.766371165625774,0,0,0,0.149790639404823,0,0,0,0,0,0.324482526135515,0.101839363850316,0,0,7.15502310014011,0,0,0,0.753524089178575,0.0680364991513279,0,0,2.58703370739016,0,0,0,0,0,0.348252166522167,0.823128545631774,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0.292399974850665,0,0.134206418760372,0,0,0.991256348951394,1.32225283331772,0,0,0,0,0.22237804384487,1.71203063501303,0.949058123089023,0.164698954724011,0.754005626400808,0.397912944082302,1.16978452271472,0,0.648414149624083,0.995706366271836,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0.442830443938806,0.156998727841375,0,723.64086271973,0,0.589676985339609,2.47348323623339,2.43432145666204,3.37648023653384,9.16653066413111,82.8564875858335,161.97309154826,253.145622959411,87.6986059816863,206.910366903688,292.379299708343,350.074324834697,616.768307688334,482.443521363367,0.184753190166605,0,0,0,0,0,1.19021820443007,0.780534591431195,0.157635144106191,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,5.4094070032094,6.62248191131358,0,0,0,0,1.26203287766503,0,0,0,0.445597348164788,0.566153061577665,0.809621403349789,0,0,0,0,2.49291845134157,0,0.164970122972535,2.65490276679926,0.242780636154981,0.302323556964751,1.13163047853539,0.295301892880773,0.307435147943927,0.258428293168221,1.81766864738753,1.78248689192361,5.05658812697306,4.21674434299995,6.18813259489121,0,0,0,0,0,0,0,0,0,0,0.661585194164886,1.48397627647332,0.484393280087717,0.663442174209714,1.67121281604391,2.29797259643086,0.582961673259701,0,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0,0.324016022465404,0.209088296014469,0.87345025498471,8.09186078308924,15.0429289420111,1.30877970992015,1.03691978633434,4.34937519160848,0,0,0,0.388902376688095,0,0.168956125490778,0,1.8228613878153,0.104859344425711,0,0,0.632022241256357,0,0.205421914329655,0,0,0,0.120195449519969,0,0,0.15241361331,0,0,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,2.12508553435409,0.563047426353546,0.36630324853453,1.92931541171159,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.512200817262403,0.729320151204882,1.04806581313991,2.38996560985018,3.33370091702423,2.47242068686673,2.56735367673452,5.05394423527595,4.56262739802432,3.2066478035633,3.7456602987953,3.39333307745807,2.98664438569189,2.38146845641537,2.66533949673168,3.47236596834669,3.70877310722976,1.91358596174717,3.42869252385415,2.66213709239006,3.33810665926249,4.21504608233753,3.10560955370591,4.23073039458383,3.47563148458268,4.20911538300549,2.8518863907631,5.61142271657738,2.60997039873183,2.46261205938909,4.50154147486658,2.32405261778949,4.24394544158511,0.249810577937946,8.4215379040347,16.9748132698156,1.14772999241306,1.98532277207564,0.927471342481686 | |||
|short_description=p1@1190003J15Rik | |||
}} |
Revision as of 12:15, 14 September 2013
Short description: | p1@1190003J15Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1190003J15Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 52bp_to_NM_029821, uc009kif.1_5end |
EntrezGene: | 1190003J15Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 9.30e-21 | 25 |
exocrine system | 9.30e-21 | 25 |
liver | 7.58e-18 | 22 |
epithelial sac | 7.58e-18 | 22 |
digestive gland | 7.58e-18 | 22 |
epithelium of foregut-midgut junction | 7.58e-18 | 22 |
anatomical boundary | 7.58e-18 | 22 |
hepatobiliary system | 7.58e-18 | 22 |
foregut-midgut junction | 7.58e-18 | 22 |
hepatic diverticulum | 7.58e-18 | 22 |
liver primordium | 7.58e-18 | 22 |
septum transversum | 7.58e-18 | 22 |
liver bud | 7.58e-18 | 22 |
digestive tract diverticulum | 9.22e-17 | 23 |
sac | 9.22e-17 | 23 |
trunk mesenchyme | 4.42e-10 | 45 |
trunk region element | 1.12e-07 | 79 |
abdomen element | 3.74e-07 | 49 |
abdominal segment element | 3.74e-07 | 49 |
abdominal segment of trunk | 3.74e-07 | 49 |
abdomen | 3.74e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.