FFCP PHASE1:Mm9::chr7:112936058..112936069,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=233651|HGNC=|MCL_coexpression_id=108|UniProt=E9PVD3,F6PYJ6|association_with_transcript=0bp_to_ENSMUST00000078482,ENSMUST00000154659,NM_001162943,uc009izh.2,uc009izk.2_5end|description=CAGE_peak_3_at_Dchs1_5end|id=chr7:112936058..112936069,-|ontology_enrichment_celltype=CL:0000393!1.40e-08!39;CL:0000211!1.40e-08!39;CL:0000540!2.07e-08!33;CL:0000047!2.07e-08!33;CL:0000031!2.07e-08!33;CL:0000404!2.07e-08!33|ontology_enrichment_celltype_v019_2=CL:0000540,2.49e-12,33;CL:0000047,2.49e-12,33;CL:0000031,2.49e-12,33;CL:0000404,2.49e-12,33;CL:0000117,6.47e-11,23;CL:0000337,6.47e-11,23;CL:0000393,1.61e-09,39;CL:0000211,1.61e-09,39;CL:0002319,2.66e-09,43;CL:0002609,4.28e-09,6;CL:0000221,5.94e-09,44;CL:0000133,5.94e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.85e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.46e-07,73;UBERON:0002346,1.75e-07,64;UBERON:0003075,1.75e-07,64;UBERON:0007284,1.75e-07,64;UBERON:0001016,3.66e-07,75|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.917733760808408,3.12956537739216,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,4.45096213891115,0.528990979272033,1.26766280701236,3.72728985276045,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,1.97010263386108,3.78016627328734,2.73422449756797,0.571301968807607,1.10434270475807,2.44981598429908,2.1086003624012,1.83843757322004,0,0.127687338085188,0.46081959976873,3.03338461779446,3.01909223887952,3.64639359389732,0.279182999001381,0,0.15279824777681,1.17851434189467,1.56608848879013,2.79599168737951,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.445326417194474,0.693941307064543,0.608930956624282,0,0.60289056221049,0.470354828542819,0.502666365318702,0,0.144599356919912,0,0.808834249737046,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0.457500602818626,2.1361239859187,0.173824320192276,0.511430914660661,0.41557608911912,0.162241263067758,2.44414473240759,0.124406970610093,0,0.210441855886474,1.04096354370163,0.919608417733892,1.80062129805349,0.753524089178575,1.02054748726992,0.896796041993948,0.843315521037559,0.258703370739016,0.862271971731369,1.32374256117473,2.46331573829528,1.31517439456545,2.50242524303038,1.74126083261083,0.61734640922383,1.19420560091096,0,0,0,0.414251545071004,0.703578179943289,0.720248245844059,0.946978942340841,0.590292695242212,0.617068451549513,0,1.07309360559848,0.233530684734339,0.493679549740441,1.14917224855367,0.405344047729279,0.584799949701329,0.219550115291051,0.805238512562231,0.210289948564127,1.9551876352064,0,0,1.06644125267617,1.39342003116263,0.77320476793256,0.605050573870028,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.58489226135736,0.898819408654221,0,0.199141273254367,0.379335801906163,0.799739588268102,1.1270773567308,0.814605311381257,0.775809948670503,0.701358198903186,1.3279672796094,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0.786235980452812,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0.312037673114561,0.505157755894224,0,0,0.184753190166605,0.189491411770485,1.46668478797823,1.18821560042632,0.469380496577004,0.335012514883631,0.952174563544055,1.17080188714679,0.630540576424764,0.8858587585951,1.11618338060241,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,1.57754109708128,1.17131623288992,0.215423397732799,0.238968797952552,0.445597348164788,0.283076530788832,1.61924280669958,1.75353514746787,0.790575555893047,0.642642632843614,0.283880170416537,1.78065603667255,3.09485222771795,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0.922305443831782,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.540183282093931,0.776152102696527,1.71469628025274,1.59606210278046,1.24858172321449,1.31639216481697,1.2178597964584,0.23467170806371,0.21183207086382,0,0,0.645857706783622,0.301564624640779,0.477489376012546,0.164140899745061,0.291480836629851,0.370850604021019,0,1.857481811669,0.555583582109135,0.376736914009382,0,0.686334519619568,0,0,0,0,1.89801596148681,0.609958401380546,0.648032044930808,0.836353184057875,0.218362563746178,0.539457385539283,0.41326727862668,0.26175594198403,0,0,0,0.897099276263873,0.827292452285488,2.13896307178452,0.774958940866387,0.844780627453891,1.05621514781179,0.39061315453185,0.104859344425711,0,0.576060012515731,0,0.810900861160657,0.410843828659309,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,0.563047426353546,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0.906284817968409,0,0.830298780673413,2.79317411380722,1.70733605754134,1.21553358534147,0.209613162627982,0.551530525350042,0.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| ||
|EntrezGene=233651 | |||
|HGNC= | |||
|MCL_coexpression_id=108 | |||
|UniProt=E9PVD3,F6PYJ6 | |||
|association_with_transcript=0bp_to_ENSMUST00000078482,ENSMUST00000154659,NM_001162943,uc009izh.2,uc009izk.2_5end | |||
|description=CAGE_peak_3_at_Dchs1_5end | |||
|id=chr7:112936058..112936069,- | |||
|ontology_enrichment_celltype=CL:0000393!1.40e-08!39;CL:0000211!1.40e-08!39;CL:0000540!2.07e-08!33;CL:0000047!2.07e-08!33;CL:0000031!2.07e-08!33;CL:0000404!2.07e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.49e-12,33;CL:0000047,2.49e-12,33;CL:0000031,2.49e-12,33;CL:0000404,2.49e-12,33;CL:0000117,6.47e-11,23;CL:0000337,6.47e-11,23;CL:0000393,1.61e-09,39;CL:0000211,1.61e-09,39;CL:0002319,2.66e-09,43;CL:0002609,4.28e-09,6;CL:0000221,5.94e-09,44;CL:0000133,5.94e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.85e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.46e-07,73;UBERON:0002346,1.75e-07,64;UBERON:0003075,1.75e-07,64;UBERON:0007284,1.75e-07,64;UBERON:0001016,3.66e-07,75 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.917733760808408,3.12956537739216,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,4.45096213891115,0.528990979272033,1.26766280701236,3.72728985276045,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,1.97010263386108,3.78016627328734,2.73422449756797,0.571301968807607,1.10434270475807,2.44981598429908,2.1086003624012,1.83843757322004,0,0.127687338085188,0.46081959976873,3.03338461779446,3.01909223887952,3.64639359389732,0.279182999001381,0,0.15279824777681,1.17851434189467,1.56608848879013,2.79599168737951,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.445326417194474,0.693941307064543,0.608930956624282,0,0.60289056221049,0.470354828542819,0.502666365318702,0,0.144599356919912,0,0.808834249737046,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0.457500602818626,2.1361239859187,0.173824320192276,0.511430914660661,0.41557608911912,0.162241263067758,2.44414473240759,0.124406970610093,0,0.210441855886474,1.04096354370163,0.919608417733892,1.80062129805349,0.753524089178575,1.02054748726992,0.896796041993948,0.843315521037559,0.258703370739016,0.862271971731369,1.32374256117473,2.46331573829528,1.31517439456545,2.50242524303038,1.74126083261083,0.61734640922383,1.19420560091096,0,0,0,0.414251545071004,0.703578179943289,0.720248245844059,0.946978942340841,0.590292695242212,0.617068451549513,0,1.07309360559848,0.233530684734339,0.493679549740441,1.14917224855367,0.405344047729279,0.584799949701329,0.219550115291051,0.805238512562231,0.210289948564127,1.9551876352064,0,0,1.06644125267617,1.39342003116263,0.77320476793256,0.605050573870028,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.58489226135736,0.898819408654221,0,0.199141273254367,0.379335801906163,0.799739588268102,1.1270773567308,0.814605311381257,0.775809948670503,0.701358198903186,1.3279672796094,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0.786235980452812,0.224862112384854,0.202860121388503,0,0,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0.312037673114561,0.505157755894224,0,0,0.184753190166605,0.189491411770485,1.46668478797823,1.18821560042632,0.469380496577004,0.335012514883631,0.952174563544055,1.17080188714679,0.630540576424764,0.8858587585951,1.11618338060241,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,1.57754109708128,1.17131623288992,0.215423397732799,0.238968797952552,0.445597348164788,0.283076530788832,1.61924280669958,1.75353514746787,0.790575555893047,0.642642632843614,0.283880170416537,1.78065603667255,3.09485222771795,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0.922305443831782,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.540183282093931,0.776152102696527,1.71469628025274,1.59606210278046,1.24858172321449,1.31639216481697,1.2178597964584,0.23467170806371,0.21183207086382,0,0,0.645857706783622,0.301564624640779,0.477489376012546,0.164140899745061,0.291480836629851,0.370850604021019,0,1.857481811669,0.555583582109135,0.376736914009382,0,0.686334519619568,0,0,0,0,1.89801596148681,0.609958401380546,0.648032044930808,0.836353184057875,0.218362563746178,0.539457385539283,0.41326727862668,0.26175594198403,0,0,0,0.897099276263873,0.827292452285488,2.13896307178452,0.774958940866387,0.844780627453891,1.05621514781179,0.39061315453185,0.104859344425711,0,0.576060012515731,0,0.810900861160657,0.410843828659309,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,0.563047426353546,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0.906284817968409,0,0.830298780673413,2.79317411380722,1.70733605754134,1.21553358534147,0.209613162627982,0.551530525350042,0.888986911206461,0.618105171716683,0.64183841918363,1.01078884705519,1.52087579934144,0.943131706930381,0.749132059759059,0.832326981263301,1.09127391015665,0.952587382566147,1.27472758539341,0.77163688185482,2.06042950401653,1.03039244094078,0.342869252385415,1.24233064311536,0.953744759789284,1.45346416632329,1.2234219453993,1.01537529470012,0.365855945745545,1.05227884575137,1.35804113845862,0,1.42362021749009,0.886540341380071,0.818462086339379,1.23949472948773,0.578719832943424,0.499621155875892,0.467863216890817,0.429742108096597,1.72159498861959,0.661774257358546,0.231867835620421 | |||
|short_description=p3@Dchs1 | |||
}} |
Revision as of 11:24, 14 September 2013
Short description: | p3@Dchs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dchs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 0bp_to_ENSMUST00000078482, ENSMUST00000154659, NM_001162943, uc009izh.2, uc009izk.2_5end |
EntrezGene: | Dchs1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.49e-12 | 33 |
neuronal stem cell | 2.49e-12 | 33 |
neuroblast | 2.49e-12 | 33 |
electrically signaling cell | 2.49e-12 | 33 |
CNS neuron (sensu Vertebrata) | 6.47e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.47e-11 | 23 |
electrically responsive cell | 1.61e-09 | 39 |
electrically active cell | 1.61e-09 | 39 |
neural cell | 2.66e-09 | 43 |
neuron of cerebral cortex | 4.28e-09 | 6 |
ectodermal cell | 5.94e-09 | 44 |
neurectodermal cell | 5.94e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.46e-07 | 73 |
neurectoderm | 1.75e-07 | 64 |
neural plate | 1.75e-07 | 64 |
presumptive neural plate | 1.75e-07 | 64 |
nervous system | 3.66e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.