FFCP PHASE1:Mm9::chr6:68718584..68718599,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2029|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:68718584..68718599,-|id=chr6:68718584..68718599,-|ontology_enrichment_celltype=CL:0000553!3.50e-10!6;CL:0000556!3.50e-10!6;CL:0000050!8.58e-07!9|ontology_enrichment_celltype_v019_2=CL:0000553,2.81e-19,6;CL:0000556,2.81e-19,6;CL:0000945,3.62e-14,1;CL:0000236,3.62e-14,1;CL:0000826,3.62e-14,1;CL:0000050,4.09e-13,9;CL:0000839,2.69e-09,13;CL:0002031,1.71e-08,25;CL:0000763,1.13e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!2.19e-11!3;UBERON:0001962!2.67e-08!2;UBERON:0001961!2.67e-08!2;UBERON:0001744!2.67e-08!2;UBERON:0002193!5.08e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.55e-13,1;UBERON:0001736,1.55e-13,1;UBERON:0003293,1.55e-13,1;UBERON:0003294,1.55e-13,1;UBERON:0001829,1.55e-13,1;UBERON:0010047,1.55e-13,1;UBERON:0000167,1.55e-13,1;UBERON:0006298,1.55e-13,1;UBERON:0002371,1.13e-07,16;UBERON:0001962,1.76e-07,2;UBERON:0001961,1.76e-07,2;UBERON:0001744,1.76e-07,2;UBERON:0000165,2.03e-07,2;UBERON:0000166,2.03e-07,2;UBERON:0000930,2.03e-07,2;UBERON:0002193,8.70e-07,48;UBERON:0002405,8.70e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0,1.41957974411207,2.05671650408608,0,0.0850432901510698,0,0,1.27993938234725,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53013036355888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878200461164203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93003025835061,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:68718584..68718599,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2029 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:68718584..68718599,- | |||
|id=chr6:68718584..68718599,- | |||
|ontology_enrichment_celltype=CL:0000553!3.50e-10!6;CL:0000556!3.50e-10!6;CL:0000050!8.58e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.81e-19,6;CL:0000556,2.81e-19,6;CL:0000945,3.62e-14,1;CL:0000236,3.62e-14,1;CL:0000826,3.62e-14,1;CL:0000050,4.09e-13,9;CL:0000839,2.69e-09,13;CL:0002031,1.71e-08,25;CL:0000763,1.13e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!2.19e-11!3;UBERON:0001962!2.67e-08!2;UBERON:0001961!2.67e-08!2;UBERON:0001744!2.67e-08!2;UBERON:0002193!5.08e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.55e-13,1;UBERON:0001736,1.55e-13,1;UBERON:0003293,1.55e-13,1;UBERON:0003294,1.55e-13,1;UBERON:0001829,1.55e-13,1;UBERON:0010047,1.55e-13,1;UBERON:0000167,1.55e-13,1;UBERON:0006298,1.55e-13,1;UBERON:0002371,1.13e-07,16;UBERON:0001962,1.76e-07,2;UBERON:0001961,1.76e-07,2;UBERON:0001744,1.76e-07,2;UBERON:0000165,2.03e-07,2;UBERON:0000166,2.03e-07,2;UBERON:0000930,2.03e-07,2;UBERON:0002193,8.70e-07,48;UBERON:0002405,8.70e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,0,1.41957974411207,2.05671650408608,0,0.0850432901510698,0,0,1.27993938234725,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53013036355888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878200461164203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93003025835061,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:68718584..68718599,- | |||
}} |
Revision as of 10:29, 14 September 2013
Short description: | p@chr6:68718584..68718599, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:68718584..68718599, - |
Coexpression cluster: | MCL_coexpression_mm9:2029 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.81e-19 | 6 |
megakaryocyte | 2.81e-19 | 6 |
lymphocyte of B lineage | 3.62e-14 | 1 |
B cell | 3.62e-14 | 1 |
pro-B cell | 3.62e-14 | 1 |
megakaryocyte-erythroid progenitor cell | 4.09e-13 | 9 |
myeloid lineage restricted progenitor cell | 2.69e-09 | 13 |
hematopoietic lineage restricted progenitor cell | 1.71e-08 | 25 |
myeloid cell | 1.13e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.55e-13 | 1 |
submandibular gland | 1.55e-13 | 1 |
gland of oral region | 1.55e-13 | 1 |
gland of foregut | 1.55e-13 | 1 |
major salivary gland | 1.55e-13 | 1 |
oral gland | 1.55e-13 | 1 |
oral cavity | 1.55e-13 | 1 |
submandibular gland primordium | 1.55e-13 | 1 |
bone marrow | 1.13e-07 | 16 |
gut-associated lymphoid tissue | 1.76e-07 | 2 |
mucosa-associated lymphoid tissue | 1.76e-07 | 2 |
lymphoid tissue | 1.76e-07 | 2 |
mouth | 2.03e-07 | 2 |
oral opening | 2.03e-07 | 2 |
stomodeum | 2.03e-07 | 2 |
hemolymphoid system | 8.70e-07 | 48 |
immune system | 8.70e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.