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FFCP PHASE1:Mm9::chr6:88848658..88848707,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=17216|HGNC=|MCL_coexpression_id=49|UniProt=P97310,Q3UJN1|association_with_transcript=66bp_to_ENSMUST00000058011,NM_008564,uc009cvx.2_5end|description=CAGE_peak_1_at_Mcm2_5end|id=chr6:88848658..88848707,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!7.38e-09!29;UBERON:0002390!5.82e-08!45;UBERON:0003061!5.82e-08!45;UBERON:0001048!5.22e-07!147;UBERON:0002193!5.88e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.37e-09,29;UBERON:0005057,7.37e-09,29;UBERON:0002390,5.82e-08,45;UBERON:0003061,5.82e-08,45;UBERON:0002193,5.88e-07,48;UBERON:0002405,5.88e-07,48|phase1_expression=12.0111635328595,3.48975407639361,0,1.51232105653415,1.50268718983904,14.9412552001582,15.4184342793047,22.7257049257174,13.6565060487117,11.4691617897777,23.7992975833452,30.8718255311952,21.0576897815383,25.5267575063472,102.597806639224,87.6717907797946,118.225957403657,23.6596624018678,17.2764186343231,22.9170411970936,8.58937230525805,47.9575294300276,44.1427643644801,10.7194923271582,11.4704640533585,1.14846392823004,4.30761996159075,7.75696437669201,7.22088993934221,11.089325709437,10.6430645114546,80.6488955293732,53.5106365198576,0,28.3074587356249,34.7430408799249,34.0962824958156,11.3003540298965,19.533383613095,11.5175223674236,9.41170380849623,17.0761371239611,10.1957174136542,7.67970589651021,8.71841608487825,8.07605709511399,27.3836970521814,33.3578489262083,18.0142669842267,8.1660557611199,18.0582483896718,40.250718022192,18.6238692724087,18.859415692295,19.1573465511204,11.3194151855817,8.88253663810146,3.6097046459421,11.7343547298567,8.46385566835253,14.5781222806421,12.876092218627,39.1289710288901,10.7987966073768,14.8329954385046,16.3410426437603,22.4700082888804,16.9056054341484,29.8626083448416,26.191152036348,31.1280942800045,7.9982275633065,7.73039893330647,32.9500249888226,38.6257248203493,30.3342199581307,1.10115880999389,1.78762273319263,1.0752457327937,8.30883612700221,7.22752384459036,13.5437476344758,1.3959149950069,0.56276261003168,1.98637722109853,7.66034322231536,7.54569908235246,7.45597783301202,11.4346551933108,16.8524579038132,8.98579914975201,3.44169550792555,0,2.69851595818909,0,3.13618820968135,11.5164424508037,26.416699999599,21.5622383820381,19.7870161725791,11.9716906810178,11.5493829672886,12.7402619853323,28.4426681261332,21.8655951421326,24.0691872201344,20.7265022456061,6.2801133845483,12.1700805314171,12.4691396814453,54.4743926045667,31.0554787878384,33.9004780966406,26.6779073778142,13.6402900277418,24.1279855352977,1.48316980640624,2.31358971071859,55.7304647728421,31.8680694396396,50.3518662089697,50.4270263260631,7.45567044872489,3.80615036115011,3.56059401582874,9.19645398750929,50.8016127905102,38.3937747835781,53.115354916541,0.299581278809645,0.915001205637253,4.64921102817598,1.39059456153821,1.27857728665165,2.28566849015516,1.78465389374533,23.5248930494231,29.7332659758122,4.0435641349388,3.99839526184301,58.2939584472913,51.9578756019649,38.7133579081501,31.4973069276644,32.3853735960321,31.515975190073,28.7664294398367,4.39795730256327,70.4907336890394,43.8726105989341,33.2547624669863,31.5641854695708,24.4681579318526,18.805616992197,15.4336602305958,41.5981617650651,27.3863143052162,27.0215302470451,44.8978329045036,38.5253936916033,41.0420604966918,34.7519778619759,34.0912419242703,36.5981471050171,31.4704910290252,28.8342091490506,32.9976283721532,11.7932995790841,39.9880435289758,18.3867559768587,7.37726166867287,6.43279944671462,7.90380415047782,3.22095405024892,1.26173969138476,8.12946437796347,1.32167513193519,11.1069237998689,59.0808453982598,46.9118077158086,32.3457327918454,24.2020229548011,16.2335972006755,15.2180500890047,14.7104009078799,15.646400698781,18.3474702424197,17.5081695396213,18.1316601020782,19.7740269903929,13.6166971421057,9.16049856970089,39.450923398241,42.7289437160386,40.574784842309,32.9915151109409,24.8259183574561,19.9185728488505,17.8327034690406,9.29943932271494,7.53593893638599,5.30607804863742,2.07516838961004,82.4214822237505,93.955199664111,98.0398809997962,91.8956349889918,90.4414349071563,67.2212248702948,37.1128017311546,24.8066896965804,51.3429842661712,17.2521847832825,21.5841749647732,23.0907878104775,12.6289438973556,10.7638448113147,1.92977408545347,5.72734889516475,45.8569216484573,43.3486837335789,45.6614280735256,37.5504397261603,22.2783322397615,7.37935286746643,5.65887578787617,19.5467578691677,17.9386398615508,15.3076577911188,8.35702905050264,13.4694285855399,3.7608755231193,6.03165135757089,2.71952841909355,9.34352118736169,9.10591262805617,1.44495530989013,1.64096361229084,31.1476396215683,5.80683132570058,42.5936096211947,28.5020283336546,29.2975820916607,32.7387253194996,26.2902435417225,25.1938112402061,46.148419990938,25.4262596382841,22.1361155650053,1.60660658210904,9.36804562374573,33.8324646967785,24.2701569436828,8.74341651754438,10.619611067197,50.9839335925461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|EntrezGene=17216
|HGNC=
|MCL_coexpression_id=49
|UniProt=P97310,Q3UJN1
|association_with_transcript=66bp_to_ENSMUST00000058011,NM_008564,uc009cvx.2_5end
|description=CAGE_peak_1_at_Mcm2_5end
|id=chr6:88848658..88848707,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!7.38e-09!29;UBERON:0002390!5.82e-08!45;UBERON:0003061!5.82e-08!45;UBERON:0001048!5.22e-07!147;UBERON:0002193!5.88e-07!48
|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.37e-09,29;UBERON:0005057,7.37e-09,29;UBERON:0002390,5.82e-08,45;UBERON:0003061,5.82e-08,45;UBERON:0002193,5.88e-07,48;UBERON:0002405,5.88e-07,48
|phase1_expression=12.0111635328595,3.48975407639361,0,1.51232105653415,1.50268718983904,14.9412552001582,15.4184342793047,22.7257049257174,13.6565060487117,11.4691617897777,23.7992975833452,30.8718255311952,21.0576897815383,25.5267575063472,102.597806639224,87.6717907797946,118.225957403657,23.6596624018678,17.2764186343231,22.9170411970936,8.58937230525805,47.9575294300276,44.1427643644801,10.7194923271582,11.4704640533585,1.14846392823004,4.30761996159075,7.75696437669201,7.22088993934221,11.089325709437,10.6430645114546,80.6488955293732,53.5106365198576,0,28.3074587356249,34.7430408799249,34.0962824958156,11.3003540298965,19.533383613095,11.5175223674236,9.41170380849623,17.0761371239611,10.1957174136542,7.67970589651021,8.71841608487825,8.07605709511399,27.3836970521814,33.3578489262083,18.0142669842267,8.1660557611199,18.0582483896718,40.250718022192,18.6238692724087,18.859415692295,19.1573465511204,11.3194151855817,8.88253663810146,3.6097046459421,11.7343547298567,8.46385566835253,14.5781222806421,12.876092218627,39.1289710288901,10.7987966073768,14.8329954385046,16.3410426437603,22.4700082888804,16.9056054341484,29.8626083448416,26.191152036348,31.1280942800045,7.9982275633065,7.73039893330647,32.9500249888226,38.6257248203493,30.3342199581307,1.10115880999389,1.78762273319263,1.0752457327937,8.30883612700221,7.22752384459036,13.5437476344758,1.3959149950069,0.56276261003168,1.98637722109853,7.66034322231536,7.54569908235246,7.45597783301202,11.4346551933108,16.8524579038132,8.98579914975201,3.44169550792555,0,2.69851595818909,0,3.13618820968135,11.5164424508037,26.416699999599,21.5622383820381,19.7870161725791,11.9716906810178,11.5493829672886,12.7402619853323,28.4426681261332,21.8655951421326,24.0691872201344,20.7265022456061,6.2801133845483,12.1700805314171,12.4691396814453,54.4743926045667,31.0554787878384,33.9004780966406,26.6779073778142,13.6402900277418,24.1279855352977,1.48316980640624,2.31358971071859,55.7304647728421,31.8680694396396,50.3518662089697,50.4270263260631,7.45567044872489,3.80615036115011,3.56059401582874,9.19645398750929,50.8016127905102,38.3937747835781,53.115354916541,0.299581278809645,0.915001205637253,4.64921102817598,1.39059456153821,1.27857728665165,2.28566849015516,1.78465389374533,23.5248930494231,29.7332659758122,4.0435641349388,3.99839526184301,58.2939584472913,51.9578756019649,38.7133579081501,31.4973069276644,32.3853735960321,31.515975190073,28.7664294398367,4.39795730256327,70.4907336890394,43.8726105989341,33.2547624669863,31.5641854695708,24.4681579318526,18.805616992197,15.4336602305958,41.5981617650651,27.3863143052162,27.0215302470451,44.8978329045036,38.5253936916033,41.0420604966918,34.7519778619759,34.0912419242703,36.5981471050171,31.4704910290252,28.8342091490506,32.9976283721532,11.7932995790841,39.9880435289758,18.3867559768587,7.37726166867287,6.43279944671462,7.90380415047782,3.22095405024892,1.26173969138476,8.12946437796347,1.32167513193519,11.1069237998689,59.0808453982598,46.9118077158086,32.3457327918454,24.2020229548011,16.2335972006755,15.2180500890047,14.7104009078799,15.646400698781,18.3474702424197,17.5081695396213,18.1316601020782,19.7740269903929,13.6166971421057,9.16049856970089,39.450923398241,42.7289437160386,40.574784842309,32.9915151109409,24.8259183574561,19.9185728488505,17.8327034690406,9.29943932271494,7.53593893638599,5.30607804863742,2.07516838961004,82.4214822237505,93.955199664111,98.0398809997962,91.8956349889918,90.4414349071563,67.2212248702948,37.1128017311546,24.8066896965804,51.3429842661712,17.2521847832825,21.5841749647732,23.0907878104775,12.6289438973556,10.7638448113147,1.92977408545347,5.72734889516475,45.8569216484573,43.3486837335789,45.6614280735256,37.5504397261603,22.2783322397615,7.37935286746643,5.65887578787617,19.5467578691677,17.9386398615508,15.3076577911188,8.35702905050264,13.4694285855399,3.7608755231193,6.03165135757089,2.71952841909355,9.34352118736169,9.10591262805617,1.44495530989013,1.64096361229084,31.1476396215683,5.80683132570058,42.5936096211947,28.5020283336546,29.2975820916607,32.7387253194996,26.2902435417225,25.1938112402061,46.148419990938,25.4262596382841,22.1361155650053,1.60660658210904,9.36804562374573,33.8324646967785,24.2701569436828,8.74341651754438,10.619611067197,50.9839335925461,50.1857104561487,23.7642400492432,20.0805287158925,19.6758494684114,13.9551278310839,34.1721705708855,30.3022771627013,13.5895805912401,11.5960469432499,27.8465966770104,4.42571487479924,51.677533986986,41.0067027591332,32.7935663598336,22.1675292052842,26.3985850051064,19.5813334516524,15.22324745573,14.7843176080138,3.60114520468494,5.51320995137405,9.56340267060584,10.9795810153216,24.0648570463342,21.3676495765614,22.3231623653283,16.3229268512716,2.22510362412612,73.9870913854702,48.5009139713573,49.0765497529736,107.935125863688,131.773235523068,98.6033926520113,44.3643702283962,44.3646103865996,41.736392088936,6.68269432610579,51.5627669537251,40.257254491116,28.2973992953119,23.208800857606,20.3077184283945,22.6572101926499,17.8531464366726,10.2084817373772,8.81381818384192,4.97071450469541,3.94585057078933,47.5462616419853,53.4430924176425,38.1124329154333,44.172659629384,37.1703476079712,23.2367332518593,45.8319434650704,40.5805662927501,18.6019773036025,4.60848010012585,34.4452121484714,61.2230150176296,47.9660169959743,69.2477986471647,58.5417294832664,59.2070437248169,65.0257381903031,70.8909730437971,59.469239019459,62.8706154903749,51.7238329751992,53.4069186453843,56.7649865677944,33.5436709261103,1.81384306892169,40.4014435140798,71.4122298611427,39.9565386946507,2.89784391048286,8.63339387075437,10.6227942075014,8.57473516316263,4.51414893631827,1.12950368523413,0.920650473014354,3.43737308063638,1.20297227640581,4.11049511862385,2.2661816921691,2.02506750069542,2.2516060161211,1.35942722695261,2.07104124700728,75.9723384316173,47.0849350613217,42.8541350442877,33.062513521288,49.0494800549479,27.5765262675021,14.2237905793034,18.9552252659783,16.0459604795908,19.7103825175762,15.9691958930851,18.6740077972215,20.2265656134946,18.8874199594364,19.7003658517754,15.7176918123414,19.8162197365703,22.7632880147172,20.192209139362,22.6686337006972,14.7433778525729,18.4574838405711,19.313331385733,21.3659232449523,20.5158449305421,22.0844126597276,22.1342847176055,23.6762740294059,22.0002664430296,17.9565526930476,20.6424931536063,21.3754726754973,21.2800142448238,23.7053367014528,24.8849528165672,18.485982767408,19.6502551094143,12.6773921888496,5.16478496585877,15.6619907574856,15.3032771509478
|short_description=p1@Mcm2
}}

Revision as of 10:55, 14 September 2013

Short description:p1@Mcm2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mcm2_5end
Coexpression cluster:MCL_coexpression_mm9:49
Association with transcript: 66bp_to_ENSMUST00000058011, NM_008564, uc009cvx.2_5end
EntrezGene:Mcm2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mcm2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.94
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I815.42
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E623.80
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F130.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E421.06
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.53
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1102.60
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A387.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5118.23
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.66
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A417.28
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A622.92
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H247.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I944.14
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.47
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I27.76
Ileum epithelium, pool1.CNhs13199.10252-104B97.22
Ileum epithelium, pool2.CNhs13232.10253-104C111.09
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I380.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G653.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F528.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F634.74
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F734.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H119.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H311.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H217.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H410.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.08
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B727.38
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C233.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.01
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C440.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.62
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I918.86
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.16
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C311.73
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.88
Mouse Meningeal cells, donor3.CNhs12109.11639-122D139.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E714.83
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D216.34
Mouse Microglia, donor1.CNhs12629.11718-123C822.47
Mouse Microglia, donor2.CNhs12634.11736-123E816.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D529.86
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F526.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D931.13
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D232.95
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F238.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D630.33
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.31
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D911.43
Mouse Schwann, donor2.CNhs12573.11746-123F916.85
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.99
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I726.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E321.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.79
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G121.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G224.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G320.73
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.28
accessory axillary lymph node, adult.CNhs10475.1063-29H912.17
adrenal gland, adult.CNhs10508.49-24D712.47
adrenal gland, embryo E14.CNhs11038.406-44C554.47
adrenal gland, embryo E16.CNhs11004.1254-43D631.06
adrenal gland, embryo E17.CNhs11043.1263-45I133.90
adrenal gland, embryo E18.CNhs11026.1262-18F526.68
adrenal gland, neonate N00.CNhs11191.1311-23C113.64
adrenal gland, neonate N25.CNhs11223.1377-27I324.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G255.73
bone (os femoris), neonate N02.CNhs11227.1985-43F531.87
bone (os femoris), neonate N16.CNhs11225.1525-43A650.35
bone (os femoris), neonate N20.CNhs11195.1350-25C350.43
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H79.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C750.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D138.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D453.12
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B123.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A229.73
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C658.29
eyeball, embryo E14.CNhs10521.399-16E251.96
eyeball, embryo E15.CNhs10593.426-16C938.71
eyeball, embryo E17.CNhs11023.1261-18D431.50
eyeball, neonate N00.CNhs11207.633-15C632.39
eyeball, neonate N01.CNhs11140.1532-43E731.52
eyeball, neonate N02.CNhs11205.1551-44G828.77
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E270.49
forelimb, embryo E12.CNhs10600.359-14H243.87
forelimb, embryo E13.CNhs10589.384-1E233.25
forelimb, embryo E14.CNhs10577.413-26A831.56
forelimb, embryo E15.CNhs11007.437-20E724.47
forelimb, embryo E17.CNhs10598.1517-43C418.81
forelimb, embryo E18.CNhs11008.1520-43B515.43
gonad, embryo E13.CNhs11044.1564-45I641.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C827.39
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D227.02
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D544.90
heart, embryo E11.CNhs10586.331-24E938.53
heart, embryo E12.CNhs11015.353-12F541.04
heart, embryo E13.CNhs11013.376-3I934.75
heart, embryo E14.CNhs10597.403-26D434.09
heart, embryo E15.CNhs11017.431-16C836.60
heart, embryo E16.CNhs11021.457-17C631.47
heart, embryo E17.CNhs11025.479-18E528.83
heart, embryo E18.CNhs11030.1283-20G333.00
heart, neonate N00.CNhs11213.639-21E311.79
heart, neonate N03.CNhs11221.1349-25I239.99
heart, neonate N10.CNhs11118.749-24G118.39
heart, neonate N16.CNhs11209.782-15G17.38
heart, neonate N20.CNhs11127.821-26I66.43
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G18.13
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A311.11
intestine, embryo E12.CNhs11019.1251-16I559.08
intestine, embryo E13.CNhs11010.381-16D546.91
intestine, embryo E15.CNhs10602.976-16D832.35
intestine, embryo E16.CNhs10585.463-22H424.20
intestine, embryo E17.CNhs10582.482-18D316.23
intestine, embryo E18.CNhs10526.1289-20F715.22
intestine, neonate N00.CNhs11126.644-26D114.71
intestine, neonate N01.CNhs11192.1322-23E915.65
intestine, neonate N06.CNhs11102.688-20B818.35
intestine, neonate N07.CNhs11095.720-20F217.51
intestine, neonate N10.CNhs11098.755-23A518.13
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E313.62
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I939.45
kidney, embryo E15.CNhs10997.434-16F842.73
kidney, embryo E16.CNhs10584.464-22A540.57
kidney, embryo E17.CNhs11028.483-18I232.99
kidney, embryo E18.CNhs11001.1288-20C724.83
kidney, neonate N00.CNhs11214.646-21G719.92
kidney, neonate N10.CNhs11206.758-6D517.83
kidney, neonate N20.CNhs11113.832-19I19.30
kidney, neonate N25.CNhs11122.1353-25F37.54
kidney, neonate N30.CNhs11203.1385-42H15.31
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F882.42
liver, embryo E13.CNhs10524.378-3H693.96
liver, embryo E14.CNhs10594.409-16E198.04
liver, embryo E15.CNhs10520.433-16D791.90
liver, embryo E16.CNhs10523.462-17F590.44
liver, embryo E17.CNhs10510.481-18A367.22
liver, embryo E18.CNhs10579.499-43G437.11
liver, neonate N00.CNhs11117.641-24F424.81
liver, neonate N03.CNhs11123.1345-25G251.34
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H221.58
liver, neonate N10.CNhs11115.751-24B923.09
liver, neonate N20.CNhs11220.823-25A312.63
liver, neonate N25.CNhs11198.1368-26H110.76
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G245.86
lung, embryo E14.CNhs10604.404-26F843.35
lung, embryo E15.CNhs11020.432-17C545.66
lung, embryo E16.CNhs10998.458-17B637.55
lung, embryo E17.CNhs10605.480-44A622.28
lung, embryo E18.CNhs10583.1287-20I67.38
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E519.55
lung, neonate N07.CNhs11111.715-19A317.94
lung, neonate N10.CNhs11219.750-23E615.31
lung, neonate N20.CNhs11109.822-18A48.36
lung, neonate N25.CNhs11119.1359-25C713.47
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B69.34
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C731.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E142.59
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E228.50
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E329.30
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D732.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D826.29
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D925.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D446.15
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D525.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.14
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I79.37
ovary, embryo E18.CNhs11040.505-44H733.83
ovary, neonate N00.CNhs11217.1299-22I424.27
oviduct, adult pregnant day01.CNhs10500.988-6G68.74
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F450.98
pancreas, embryo E15.CNhs11042.1556-45F250.19
pancreas, embryo E16.CNhs11003.460-26E523.76
pancreas, embryo E17.CNhs10599.1558-45G320.08
pancreas, embryo E18.CNhs10580.1535-43I719.68
pancreas, neonate N00.CNhs11105.645-26G913.96
pancreas, neonate N01.CNhs11138.1531-43D734.17
pancreas, neonate N02.CNhs11139.1539-43D830.30
pancreas, neonate N16.CNhs11136.787-43B613.59
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H527.85
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E651.68
pituitary gland, embryo E13.CNhs11009.370-44C741.01
pituitary gland, embryo E14.CNhs11037.398-44A532.79
pituitary gland, embryo E15.CNhs10592.427-16B922.17
pituitary gland, embryo E16.CNhs11036.449-43F626.40
pituitary gland, embryo E17.CNhs11039.1265-44F519.58
pituitary gland, neonate N00.CNhs11190.1308-22E915.22
placenta, adult pregnant day10.CNhs10472.539-13I714.78
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C39.56
skin, neonate N00.CNhs11124.650-25G410.98
skin, neonate N03.CNhs11215.662-22H324.06
skin, neonate N06.CNhs11097.693-20I521.37
skin, neonate N10.CNhs11108.762-6C422.32
small intestine, neonate N16.CNhs11114.790-21I116.32
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G273.99
spleen, embryo E16.CNhs11035.461-43C148.50
spleen, embryo E18.CNhs11011.1271-21F249.08
spleen, neonate N10.CNhs11116.752-24D1107.94
spleen, neonate N20.CNhs11112.824-19H1131.77
spleen, neonate N25.CNhs11099.1354-25G398.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C644.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C944.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D341.74
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E351.56
stomach, embryo E15.CNhs10603.1252-16G840.26
stomach, embryo E16.CNhs11022.459-17D428.30
stomach, embryo E17.CNhs11006.1035-18D523.21
stomach, embryo E18.CNhs10999.1286-20C620.31
stomach, neonate N03.CNhs11193.1340-24B822.66
stomach, neonate N07.CNhs11210.718-18A917.85
stomach, neonate N25.CNhs11104.1355-25E410.21
stomach, neonate N30.CNhs11134.1386-42I18.81
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F547.55
testis, embryo E15.CNhs11034.443-27C553.44
testis, embryo E16.CNhs11033.470-26G538.11
testis, embryo E17.CNhs11029.486-18I544.17
testis, embryo E18.CNhs11027.503-18G537.17
testis, neonate N00.CNhs11189.1300-22B723.24
testis, neonate N07.CNhs11222.726-26I445.83
testis, neonate N10.CNhs11204.763-44D940.58
testis, neonate N20.CNhs11110.839-18H318.60
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B534.45
thymus, embryo E14.CNhs11041.402-44I461.22
thymus, embryo E15.CNhs11005.430-45I247.97
thymus, embryo E16.CNhs11002.456-26C569.25
thymus, embryo E17.CNhs10581.478-18C158.54
thymus, embryo E18.CNhs10595.1273-19G459.21
thymus, neonate N02.CNhs11181.1541-43F865.03
thymus, neonate N03.CNhs11137.2104-43C770.89
thymus, neonate N06.CNhs11197.681-26C459.47
thymus, neonate N07.CNhs11211.713-19D362.87
thymus, neonate N10.CNhs11194.748-24E451.72
thymus, neonate N20.CNhs11186.820-7A253.41
thymus, neonate N25.CNhs11125.1362-25G756.76
thymus, neonate N30.CNhs11132.1393-42G233.54
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H340.40
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F771.41
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G539.96
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F58.63
uterus, adult.CNhs10509.92-27E510.62
vagina, adult.CNhs10502.89-27D58.57
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I875.97
whole body, embryo E12.CNhs10587.857-27C947.08
whole body, embryo E13.CNhs10512.372-23H242.85
whole body, embryo E14.5.CNhs10578.420-27D233.06
whole body, embryo E14.CNhs10519.395-14B149.05
whole body, embryo E16.CNhs10514.453-14F227.58
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.96
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.71
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.67
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.76
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.67
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.46
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.31
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.37
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G522.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G523.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G523.71
whole body, embryo E17.5.CNhs10513.490-9F924.88
whole body, embryo E17.CNhs10517.475-3I518.49
whole body, embryo E18.CNhs10516.493-3B319.65
whole body, neonate N00.CNhs10525.657-19C212.68
whole body, neonate N01.CNhs10576.659-23C65.16
whole body, neonate N06.CNhs10515.692-21D115.66
whole body, neonate N10.CNhs10518.761-6B415.30





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ7.37e-0929
immune organ7.37e-0929
hematopoietic system5.82e-0845
blood island5.82e-0845
hemolymphoid system5.88e-0748
immune system5.88e-0748







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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