FFCP PHASE1:Mm9::chr7:53984353..53984360,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=211|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:53984353..53984360,-|id=chr7:53984353..53984360,-|ontology_enrichment_celltype=CL:0000181!1.70e-11!5;CL:0000417!1.70e-11!5;CL:0000668!1.70e-11!5;CL:0000412!1.70e-11!5;CL:0000182!1.70e-11!5|ontology_enrichment_celltype_v019_2=CL:0000182,7.08e-36,5;CL:0000223,2.44e-09,20;CL:0000066,1.53e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.00e-35!22;UBERON:0007499!5.00e-35!22;UBERON:0006925!5.00e-35!22;UBERON:0009497!5.00e-35!22;UBERON:0000015!5.00e-35!22;UBERON:0002423!5.00e-35!22;UBERON:0006235!5.00e-35!22;UBERON:0008835!5.00e-35!22;UBERON:0003894!5.00e-35!22;UBERON:0004161!5.00e-35!22;UBERON:0008836!5.00e-35!22;UBERON:0009854!2.34e-33!23;UBERON:0009856!2.34e-33!23;UBERON:0002365!2.03e-30!25;UBERON:0002330!2.03e-30!25;UBERON:0005172!1.02e-15!49;UBERON:0005173!1.02e-15!49;UBERON:0002417!1.02e-15!49;UBERON:0000916!1.02e-15!49;UBERON:0003914!1.37e-14!47;UBERON:0005256!1.37e-14!47;UBERON:0005057!3.52e-13!51;UBERON:0003929!5.63e-12!55;UBERON:0009569!9.55e-11!66;UBERON:0002368!1.07e-10!60;UBERON:0002530!1.29e-09!65;UBERON:0000949!1.36e-09!72;UBERON:0000490!2.03e-09!66;UBERON:0005911!7.29e-09!69;UBERON:0002405!1.09e-08!70;UBERON:0005177!1.20e-08!85;UBERON:0000466!1.98e-08!79;UBERON:0001041!1.02e-07!92;UBERON:0000077!3.97e-07!97;UBERON:0002100!5.24e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.90e-24,22;UBERON:0007499,1.90e-24,22;UBERON:0006925,1.90e-24,22;UBERON:0009497,1.90e-24,22;UBERON:0000015,1.90e-24,22;UBERON:0002423,1.90e-24,22;UBERON:0006235,1.90e-24,22;UBERON:0008835,1.90e-24,22;UBERON:0003894,1.90e-24,22;UBERON:0004161,1.90e-24,22;UBERON:0008836,1.90e-24,22;UBERON:0009854,2.17e-23,23;UBERON:0009856,2.17e-23,23;UBERON:0002365,1.57e-21,25;UBERON:0002330,1.57e-21,25;UBERON:0005256,5.49e-12,45;UBERON:0003914,1.78e-11,47;UBERON:0005172,5.25e-11,49;UBERON:0005173,5.25e-11,49;UBERON:0002417,5.25e-11,49;UBERON:0000916,5.25e-11,49;UBERON:0003929,8.45e-10,55;UBERON:0002368,5.62e-09,60;UBERON:0003104,7.92e-09,61;UBERON:0009142,7.92e-09,61;UBERON:0002530,2.81e-08,65;UBERON:0000490,3.76e-08,66;UBERON:0009569,3.76e-08,66;UBERON:0005911,8.62e-08,69;UBERON:0000949,1.85e-07,72;UBERON:0005177,8.74e-07,79|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.719885334831,5.93673510801599,3.24888208723835,3.13618820968135,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,1.77871576252289,0.333690211432188,0,0,0.405720242777006,0.482354319504834,0.50925170356284,0,0.162135226775035,0.823684239564244,2.87536413054709,0,0.312037673114561,1.76805214562978,0.538192240565737,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p@chr7:53984353..53984360,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=211 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:53984353..53984360,- | |||
|id=chr7:53984353..53984360,- | |||
|ontology_enrichment_celltype=CL:0000181!1.70e-11!5;CL:0000417!1.70e-11!5;CL:0000668!1.70e-11!5;CL:0000412!1.70e-11!5;CL:0000182!1.70e-11!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.08e-36,5;CL:0000223,2.44e-09,20;CL:0000066,1.53e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.00e-35!22;UBERON:0007499!5.00e-35!22;UBERON:0006925!5.00e-35!22;UBERON:0009497!5.00e-35!22;UBERON:0000015!5.00e-35!22;UBERON:0002423!5.00e-35!22;UBERON:0006235!5.00e-35!22;UBERON:0008835!5.00e-35!22;UBERON:0003894!5.00e-35!22;UBERON:0004161!5.00e-35!22;UBERON:0008836!5.00e-35!22;UBERON:0009854!2.34e-33!23;UBERON:0009856!2.34e-33!23;UBERON:0002365!2.03e-30!25;UBERON:0002330!2.03e-30!25;UBERON:0005172!1.02e-15!49;UBERON:0005173!1.02e-15!49;UBERON:0002417!1.02e-15!49;UBERON:0000916!1.02e-15!49;UBERON:0003914!1.37e-14!47;UBERON:0005256!1.37e-14!47;UBERON:0005057!3.52e-13!51;UBERON:0003929!5.63e-12!55;UBERON:0009569!9.55e-11!66;UBERON:0002368!1.07e-10!60;UBERON:0002530!1.29e-09!65;UBERON:0000949!1.36e-09!72;UBERON:0000490!2.03e-09!66;UBERON:0005911!7.29e-09!69;UBERON:0002405!1.09e-08!70;UBERON:0005177!1.20e-08!85;UBERON:0000466!1.98e-08!79;UBERON:0001041!1.02e-07!92;UBERON:0000077!3.97e-07!97;UBERON:0002100!5.24e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.90e-24,22;UBERON:0007499,1.90e-24,22;UBERON:0006925,1.90e-24,22;UBERON:0009497,1.90e-24,22;UBERON:0000015,1.90e-24,22;UBERON:0002423,1.90e-24,22;UBERON:0006235,1.90e-24,22;UBERON:0008835,1.90e-24,22;UBERON:0003894,1.90e-24,22;UBERON:0004161,1.90e-24,22;UBERON:0008836,1.90e-24,22;UBERON:0009854,2.17e-23,23;UBERON:0009856,2.17e-23,23;UBERON:0002365,1.57e-21,25;UBERON:0002330,1.57e-21,25;UBERON:0005256,5.49e-12,45;UBERON:0003914,1.78e-11,47;UBERON:0005172,5.25e-11,49;UBERON:0005173,5.25e-11,49;UBERON:0002417,5.25e-11,49;UBERON:0000916,5.25e-11,49;UBERON:0003929,8.45e-10,55;UBERON:0002368,5.62e-09,60;UBERON:0003104,7.92e-09,61;UBERON:0009142,7.92e-09,61;UBERON:0002530,2.81e-08,65;UBERON:0000490,3.76e-08,66;UBERON:0009569,3.76e-08,66;UBERON:0005911,8.62e-08,69;UBERON:0000949,1.85e-07,72;UBERON:0005177,8.74e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.719885334831,5.93673510801599,3.24888208723835,3.13618820968135,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,1.77871576252289,0.333690211432188,0,0,0.405720242777006,0.482354319504834,0.50925170356284,0,0.162135226775035,0.823684239564244,2.87536413054709,0,0.312037673114561,1.76805214562978,0.538192240565737,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:53984353..53984360,- | |||
}} |
Revision as of 13:51, 14 September 2013
Short description: | p@chr7:53984353..53984360, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:53984353..53984360, - |
Coexpression cluster: | MCL_coexpression_mm9:211 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.08e-36 | 5 |
endodermal cell | 2.44e-09 | 20 |
epithelial cell | 1.53e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 1.90e-24 | 22 |
epithelial sac | 1.90e-24 | 22 |
digestive gland | 1.90e-24 | 22 |
epithelium of foregut-midgut junction | 1.90e-24 | 22 |
anatomical boundary | 1.90e-24 | 22 |
hepatobiliary system | 1.90e-24 | 22 |
foregut-midgut junction | 1.90e-24 | 22 |
hepatic diverticulum | 1.90e-24 | 22 |
liver primordium | 1.90e-24 | 22 |
septum transversum | 1.90e-24 | 22 |
liver bud | 1.90e-24 | 22 |
digestive tract diverticulum | 2.17e-23 | 23 |
sac | 2.17e-23 | 23 |
exocrine gland | 1.57e-21 | 25 |
exocrine system | 1.57e-21 | 25 |
trunk mesenchyme | 5.49e-12 | 45 |
epithelial tube | 1.78e-11 | 47 |
abdomen element | 5.25e-11 | 49 |
abdominal segment element | 5.25e-11 | 49 |
abdominal segment of trunk | 5.25e-11 | 49 |
abdomen | 5.25e-11 | 49 |
gut epithelium | 8.45e-10 | 55 |
endocrine gland | 5.62e-09 | 60 |
mesenchyme | 7.92e-09 | 61 |
entire embryonic mesenchyme | 7.92e-09 | 61 |
gland | 2.81e-08 | 65 |
unilaminar epithelium | 3.76e-08 | 66 |
subdivision of trunk | 3.76e-08 | 66 |
endo-epithelium | 8.62e-08 | 69 |
endocrine system | 1.85e-07 | 72 |
trunk region element | 8.74e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.