FFCP PHASE1:Mm9::chr15:84550483..84550522,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=73167|HGNC=|MCL_coexpression_id=44|UniProt=Q9CXP4|association_with_transcript=0bp_to_ENSMUST00000006029,ENSMUST00000167499,uc007xcj.2_5end|description=CAGE_peak_1_at_Arhgap8_5end|id=chr15:84550483..84550522,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.92e-15!130;UBERON:0000925!1.92e-15!130;UBERON:0006595!1.92e-15!130;UBERON:0001007!2.77e-14!128;UBERON:0001555!2.77e-14!128;UBERON:0007026!2.77e-14!128;UBERON:0004921!2.92e-13!126;UBERON:0004185!2.92e-13!126;UBERON:0005409!3.14e-12!59;UBERON:0000160!2.89e-11!43;UBERON:0005153!9.25e-10!17;UBERON:0000464!2.94e-09!57;UBERON:0005178!3.88e-09!17;UBERON:0005181!3.88e-09!17;UBERON:0002224!3.88e-09!17;UBERON:0000915!3.88e-09!17;UBERON:0008947!3.88e-09!17;UBERON:0003258!3.88e-09!17;UBERON:0002048!9.30e-08!14;UBERON:0000117!9.30e-08!14;UBERON:0000171!9.30e-08!14;UBERON:0000170!9.30e-08!14;UBERON:0005597!9.30e-08!14;UBERON:0000118!9.30e-08!14;UBERON:0001004!5.62e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.74e-13,118;UBERON:0000925,2.74e-13,118;UBERON:0006595,2.74e-13,118;UBERON:0001007,3.85e-12,116;UBERON:0001555,3.85e-12,116;UBERON:0007026,3.85e-12,116;UBERON:0004921,3.91e-11,114;UBERON:0005153,1.07e-10,17;UBERON:0005409,3.05e-10,47;UBERON:0005178,5.31e-10,17;UBERON:0005181,5.31e-10,17;UBERON:0002224,5.31e-10,17;UBERON:0000915,5.31e-10,17;UBERON:0008947,5.31e-10,17;UBERON:0003258,5.31e-10,17;UBERON:0000160,1.61e-09,31;UBERON:0001004,1.31e-08,42;UBERON:0002048,1.82e-08,14;UBERON:0000117,1.82e-08,14;UBERON:0000171,1.82e-08,14;UBERON:0000170,1.82e-08,14;UBERON:0005597,1.82e-08,14;UBERON:0000118,1.82e-08,14;UBERON:0000065,4.87e-08,41;UBERON:0005157,7.80e-08,20;UBERON:0006554,5.04e-07,18;UBERON:0001008,7.77e-07,19|phase1_expression=1.60148847104794,11.8651638597383,13.1949779422965,1.20985684522732,0.500895729946347,13.5982210248631,20.3242997318107,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,13.759348360233,11.6998733344257,11.4846392823004,10.3382879078178,14.0056301245828,1.71021077510736,2.52030129759931,7.09537634096975,0,0,0,9.24325183204079,9.64160943079256,10.4126371693808,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,3.05235218932625,2.85592037554813,1.1665793944457,2.09979632438044,2.87505128729943,0.167782606057736,0,0,0,0.573066879877513,0,0,0,0,0,0,0.449949858640699,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0.151143120213571,5.50742528533188,0,0,0,0,0,2.10666630197628,0,0,0,5.7745802108439,0,0,0,8.01016851741492,9.37431502257865,8.08839112023653,2.96878087269556,1.55362730188303,0.742210695324124,1.21439728736295,0.608930956624282,0.691846491768175,0.150722640552623,1.17588707135705,0.251333182659351,18.7868175478124,1.01219549843938,0,0.161766849947409,0,0,9.31958806090611,0,0,6.38642638021478,0,0,0,0,0.457500602818626,0,0,0,0,0.162241263067758,6.92507674182151,4.60305791257344,18.9542068825256,9.04899980311838,0.650602214813519,0.229902104433473,1.44049703844279,0.30140963567143,0.748401490664606,0.512454881139399,0.468508622798644,2.32833033665114,1.29340795759705,2.83659120251729,3.16712023495108,1.53437012699302,1.94633074457919,0.348252166522167,2.05782136407943,1.59227413454795,0,0,0,0.828503090142008,0.938104239924385,1.44049649168812,0.946978942340841,1.96764231747404,1.23413690309903,1.62773761325285,0.268273401399619,1.05088808130453,0.329119699826961,0.492502392237286,0.891756905004413,0.438599962275997,0.658650345873152,2.01309628140558,0,0,1.32167513193519,3.43785736662608,2.55945900642281,3.0190767341857,5.54130083685001,8.0673409849337,5.78182913996663,5.32631753115166,1.42358718463353,7.08205505313247,5.02670417600539,8.75408476981064,7.01870713628832,2.69645822596266,2.16138049874694,3.38540164532424,3.03468641524931,1.25673363870702,9.01661885384643,2.24016460629846,2.52138233317913,5.40045813155453,3.54124607895841,4.72352473534727,2.04098346193787,5.18268088471562,0,0.667380422864376,0.196558995113203,0.674586337154561,0.405720242777006,0.241177159752417,0,0.575392274901621,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.538192240565737,0.964887042726734,14.965008403495,3.03186258832776,6.51859905768104,6.11082308790677,8.68353918667458,13.5680068527871,11.9021820443007,10.9274842800367,7.40885177299098,9.08005227559977,7.49437412690189,6.55453258862952,11.2245238212832,12.2951699794285,0,0,16.2282210096282,14.9005843004556,0,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,2.12910127812403,3.02711526234334,6.8412522928502,6.76377504187395,3.98235415019888,1.94224508923985,3.32555912661226,0.943025398779491,3.2483208216885,5.22639751504677,3.6179961043551,3.63533729477506,3.20847640546249,5.05658812697306,7.37930260024991,9.28219889233682,6.12791290356818,4.14140516272013,4.91562998374467,4.50107773566344,4.96552654198366,3.74574516964348,2.13913726782757,5.17590413494819,22.2938122660525,28.1736654248881,37.9308844654535,2.14352128823924,0.968786560175433,0.904693873922338,0.835606408021955,0.820704498725306,4.66369338607761,0,0.170870880797853,2.06386867963222,0.555583582109135,0,0,0.228778173206523,0.849892149969277,0,0.414599921413271,13.3653886522116,3.79603192297362,4.06638934253697,4.42821897369385,5.01811910434725,5.02233896616208,8.90104686139817,9.58780086413897,8.37619014348895,5.31421390496351,16.1548221402601,0,2.24274819065968,1.48912641411388,0.972255941720238,2.19571699912143,1.18269287843545,1.64300134104056,1.3020438484395,0.314578033277133,0,0.576060012515731,6.32022241256356,10.3389859797984,12.0171819882848,8.83461596249006,8.05620130503666,7.74857283646933,5.7693815769585,6.20296014133224,4.74542314756294,4.87723562591999,4.94048307170519,3.99577311032985,4.2333210321745,2.80504565235765,0.906921534460845,11.5432695754514,0,14.7738462400389,2.70465431645067,8.07034644440082,4.76194223094889,1.2862102744744,109.342718679709,0,0,0,0,0.685082519770642,0,0,0.900642406448441,0.453142408984205,0,1.03787347584177,0.798049746802062,1.70733605754134,1.94485373654635,0.209613162627982,1.47074806760011,1.55572709461131,1.03017528619447,2.56735367673452,1.76888048234658,2.5347929989024,1.13175804831646,1.31098110457835,1.21647789569252,1.89537047553524,0.952587382566147,2.20180219295225,3.08654752741928,0.412085900803307,2.35518272215036,0.342869252385415,1.24233064311536,0.476872379894642,2.32554266611726,0.564656282491984,1.86152137361688,1.09756783723664,2.10455769150274,0.543216455383447,2.80571135828869,2.60997039873183,2.36410757701352,4.91077251803627,1.54936841185966,3.08650577569826,0.749431733813838,0.935726433781634,3.43793686477277,0.382576664137687,0,0.463735671240843|short_description=p1@Arhgap8}} | ||
|EntrezGene=73167 | |||
|HGNC= | |||
|MCL_coexpression_id=44 | |||
|UniProt=Q9CXP4 | |||
|association_with_transcript=0bp_to_ENSMUST00000006029,ENSMUST00000167499,uc007xcj.2_5end | |||
|description=CAGE_peak_1_at_Arhgap8_5end | |||
|id=chr15:84550483..84550522,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.92e-15!130;UBERON:0000925!1.92e-15!130;UBERON:0006595!1.92e-15!130;UBERON:0001007!2.77e-14!128;UBERON:0001555!2.77e-14!128;UBERON:0007026!2.77e-14!128;UBERON:0004921!2.92e-13!126;UBERON:0004185!2.92e-13!126;UBERON:0005409!3.14e-12!59;UBERON:0000160!2.89e-11!43;UBERON:0005153!9.25e-10!17;UBERON:0000464!2.94e-09!57;UBERON:0005178!3.88e-09!17;UBERON:0005181!3.88e-09!17;UBERON:0002224!3.88e-09!17;UBERON:0000915!3.88e-09!17;UBERON:0008947!3.88e-09!17;UBERON:0003258!3.88e-09!17;UBERON:0002048!9.30e-08!14;UBERON:0000117!9.30e-08!14;UBERON:0000171!9.30e-08!14;UBERON:0000170!9.30e-08!14;UBERON:0005597!9.30e-08!14;UBERON:0000118!9.30e-08!14;UBERON:0001004!5.62e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.74e-13,118;UBERON:0000925,2.74e-13,118;UBERON:0006595,2.74e-13,118;UBERON:0001007,3.85e-12,116;UBERON:0001555,3.85e-12,116;UBERON:0007026,3.85e-12,116;UBERON:0004921,3.91e-11,114;UBERON:0005153,1.07e-10,17;UBERON:0005409,3.05e-10,47;UBERON:0005178,5.31e-10,17;UBERON:0005181,5.31e-10,17;UBERON:0002224,5.31e-10,17;UBERON:0000915,5.31e-10,17;UBERON:0008947,5.31e-10,17;UBERON:0003258,5.31e-10,17;UBERON:0000160,1.61e-09,31;UBERON:0001004,1.31e-08,42;UBERON:0002048,1.82e-08,14;UBERON:0000117,1.82e-08,14;UBERON:0000171,1.82e-08,14;UBERON:0000170,1.82e-08,14;UBERON:0005597,1.82e-08,14;UBERON:0000118,1.82e-08,14;UBERON:0000065,4.87e-08,41;UBERON:0005157,7.80e-08,20;UBERON:0006554,5.04e-07,18;UBERON:0001008,7.77e-07,19 | |||
|phase1_expression=1.60148847104794,11.8651638597383,13.1949779422965,1.20985684522732,0.500895729946347,13.5982210248631,20.3242997318107,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,13.759348360233,11.6998733344257,11.4846392823004,10.3382879078178,14.0056301245828,1.71021077510736,2.52030129759931,7.09537634096975,0,0,0,9.24325183204079,9.64160943079256,10.4126371693808,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,3.05235218932625,2.85592037554813,1.1665793944457,2.09979632438044,2.87505128729943,0.167782606057736,0,0,0,0.573066879877513,0,0,0,0,0,0,0.449949858640699,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0.151143120213571,5.50742528533188,0,0,0,0,0,2.10666630197628,0,0,0,5.7745802108439,0,0,0,8.01016851741492,9.37431502257865,8.08839112023653,2.96878087269556,1.55362730188303,0.742210695324124,1.21439728736295,0.608930956624282,0.691846491768175,0.150722640552623,1.17588707135705,0.251333182659351,18.7868175478124,1.01219549843938,0,0.161766849947409,0,0,9.31958806090611,0,0,6.38642638021478,0,0,0,0,0.457500602818626,0,0,0,0,0.162241263067758,6.92507674182151,4.60305791257344,18.9542068825256,9.04899980311838,0.650602214813519,0.229902104433473,1.44049703844279,0.30140963567143,0.748401490664606,0.512454881139399,0.468508622798644,2.32833033665114,1.29340795759705,2.83659120251729,3.16712023495108,1.53437012699302,1.94633074457919,0.348252166522167,2.05782136407943,1.59227413454795,0,0,0,0.828503090142008,0.938104239924385,1.44049649168812,0.946978942340841,1.96764231747404,1.23413690309903,1.62773761325285,0.268273401399619,1.05088808130453,0.329119699826961,0.492502392237286,0.891756905004413,0.438599962275997,0.658650345873152,2.01309628140558,0,0,1.32167513193519,3.43785736662608,2.55945900642281,3.0190767341857,5.54130083685001,8.0673409849337,5.78182913996663,5.32631753115166,1.42358718463353,7.08205505313247,5.02670417600539,8.75408476981064,7.01870713628832,2.69645822596266,2.16138049874694,3.38540164532424,3.03468641524931,1.25673363870702,9.01661885384643,2.24016460629846,2.52138233317913,5.40045813155453,3.54124607895841,4.72352473534727,2.04098346193787,5.18268088471562,0,0.667380422864376,0.196558995113203,0.674586337154561,0.405720242777006,0.241177159752417,0,0.575392274901621,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.538192240565737,0.964887042726734,14.965008403495,3.03186258832776,6.51859905768104,6.11082308790677,8.68353918667458,13.5680068527871,11.9021820443007,10.9274842800367,7.40885177299098,9.08005227559977,7.49437412690189,6.55453258862952,11.2245238212832,12.2951699794285,0,0,16.2282210096282,14.9005843004556,0,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,2.12910127812403,3.02711526234334,6.8412522928502,6.76377504187395,3.98235415019888,1.94224508923985,3.32555912661226,0.943025398779491,3.2483208216885,5.22639751504677,3.6179961043551,3.63533729477506,3.20847640546249,5.05658812697306,7.37930260024991,9.28219889233682,6.12791290356818,4.14140516272013,4.91562998374467,4.50107773566344,4.96552654198366,3.74574516964348,2.13913726782757,5.17590413494819,22.2938122660525,28.1736654248881,37.9308844654535,2.14352128823924,0.968786560175433,0.904693873922338,0.835606408021955,0.820704498725306,4.66369338607761,0,0.170870880797853,2.06386867963222,0.555583582109135,0,0,0.228778173206523,0.849892149969277,0,0.414599921413271,13.3653886522116,3.79603192297362,4.06638934253697,4.42821897369385,5.01811910434725,5.02233896616208,8.90104686139817,9.58780086413897,8.37619014348895,5.31421390496351,16.1548221402601,0,2.24274819065968,1.48912641411388,0.972255941720238,2.19571699912143,1.18269287843545,1.64300134104056,1.3020438484395,0.314578033277133,0,0.576060012515731,6.32022241256356,10.3389859797984,12.0171819882848,8.83461596249006,8.05620130503666,7.74857283646933,5.7693815769585,6.20296014133224,4.74542314756294,4.87723562591999,4.94048307170519,3.99577311032985,4.2333210321745,2.80504565235765,0.906921534460845,11.5432695754514,0,14.7738462400389,2.70465431645067,8.07034644440082,4.76194223094889,1.2862102744744,109.342718679709,0,0,0,0,0.685082519770642,0,0,0.900642406448441,0.453142408984205,0,1.03787347584177,0.798049746802062,1.70733605754134,1.94485373654635,0.209613162627982,1.47074806760011,1.55572709461131,1.03017528619447,2.56735367673452,1.76888048234658,2.5347929989024,1.13175804831646,1.31098110457835,1.21647789569252,1.89537047553524,0.952587382566147,2.20180219295225,3.08654752741928,0.412085900803307,2.35518272215036,0.342869252385415,1.24233064311536,0.476872379894642,2.32554266611726,0.564656282491984,1.86152137361688,1.09756783723664,2.10455769150274,0.543216455383447,2.80571135828869,2.60997039873183,2.36410757701352,4.91077251803627,1.54936841185966,3.08650577569826,0.749431733813838,0.935726433781634,3.43793686477277,0.382576664137687,0,0.463735671240843 | |||
|short_description=p1@Arhgap8 | |||
}} |
Revision as of 11:26, 13 September 2013
Short description: | p1@Arhgap8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arhgap8_5end |
Coexpression cluster: | MCL_coexpression_mm9:44 |
Association with transcript: | 0bp_to_ENSMUST00000006029, ENSMUST00000167499, uc007xcj.2_5end |
EntrezGene: | Arhgap8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.74e-13 | 118 |
endoderm | 2.74e-13 | 118 |
presumptive endoderm | 2.74e-13 | 118 |
digestive system | 3.85e-12 | 116 |
digestive tract | 3.85e-12 | 116 |
primitive gut | 3.85e-12 | 116 |
subdivision of digestive tract | 3.91e-11 | 114 |
epithelial bud | 1.07e-10 | 17 |
gastrointestinal system | 3.05e-10 | 47 |
thoracic cavity element | 5.31e-10 | 17 |
thoracic segment organ | 5.31e-10 | 17 |
thoracic cavity | 5.31e-10 | 17 |
thoracic segment of trunk | 5.31e-10 | 17 |
respiratory primordium | 5.31e-10 | 17 |
endoderm of foregut | 5.31e-10 | 17 |
intestine | 1.61e-09 | 31 |
respiratory system | 1.31e-08 | 42 |
lung | 1.82e-08 | 14 |
respiratory tube | 1.82e-08 | 14 |
respiration organ | 1.82e-08 | 14 |
pair of lungs | 1.82e-08 | 14 |
lung primordium | 1.82e-08 | 14 |
lung bud | 1.82e-08 | 14 |
respiratory tract | 4.87e-08 | 41 |
epithelial fold | 7.80e-08 | 20 |
urinary system structure | 5.04e-07 | 18 |
renal system | 7.77e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.