FFCP PHASE1:Mm9::chr2:172371713..172371724,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=143|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:172371713..172371724,+|id=chr2:172371713..172371724,+|ontology_enrichment_celltype=CL:0000349!1.18e-44!3;CL:0000351!1.18e-44!3|ontology_enrichment_celltype_v019_2=CL:0000349,1.33e-65,3;CL:0000351,1.33e-65,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000358!1.18e-44!3;UBERON:0000307!1.18e-44!3;UBERON:0001987!1.31e-29!2;UBERON:0003124!1.31e-29!2;UBERON:0004340!1.31e-29!2;UBERON:0005631!3.89e-20!3;UBERON:0000478!3.89e-20!3;UBERON:0000158!3.89e-20!3;UBERON:0005795!2.21e-15!4;UBERON:0000995!2.21e-15!4;UBERON:0003975!1.62e-12!5;UBERON:0003134!3.41e-08!8;UBERON:0004175!2.19e-07!9;UBERON:0000474!2.19e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.33e-65,3;UBERON:0000307,1.33e-65,3;UBERON:0007010,1.33e-65,3;UBERON:0001987,5.17e-12,2;UBERON:0003124,5.17e-12,2;UBERON:0004340,5.17e-12,2;UBERON:0005631,1.88e-08,3;UBERON:0000478,1.88e-08,3;UBERON:0000158,1.88e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,2.33015277950202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10780334723691,15.6999249066582,4.86865387455827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:172371713..172371724,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=143 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:172371713..172371724,+ | |||
|id=chr2:172371713..172371724,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.18e-44!3;CL:0000351!1.18e-44!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.33e-65,3;CL:0000351,1.33e-65,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000358!1.18e-44!3;UBERON:0000307!1.18e-44!3;UBERON:0001987!1.31e-29!2;UBERON:0003124!1.31e-29!2;UBERON:0004340!1.31e-29!2;UBERON:0005631!3.89e-20!3;UBERON:0000478!3.89e-20!3;UBERON:0000158!3.89e-20!3;UBERON:0005795!2.21e-15!4;UBERON:0000995!2.21e-15!4;UBERON:0003975!1.62e-12!5;UBERON:0003134!3.41e-08!8;UBERON:0004175!2.19e-07!9;UBERON:0000474!2.19e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.33e-65,3;UBERON:0000307,1.33e-65,3;UBERON:0007010,1.33e-65,3;UBERON:0001987,5.17e-12,2;UBERON:0003124,5.17e-12,2;UBERON:0004340,5.17e-12,2;UBERON:0005631,1.88e-08,3;UBERON:0000478,1.88e-08,3;UBERON:0000158,1.88e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,2.33015277950202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10780334723691,15.6999249066582,4.86865387455827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:172371713..172371724,+ | |||
}} |
Revision as of 23:04, 13 September 2013
Short description: | p@chr2:172371713..172371724, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:172371713..172371724, + |
Coexpression cluster: | MCL_coexpression_mm9:143 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.33e-65 | 3 |
trophoblast cell | 1.33e-65 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.33e-65 | 3 |
blastula | 1.33e-65 | 3 |
cleaving embryo | 1.33e-65 | 3 |
placenta | 5.17e-12 | 2 |
chorion | 5.17e-12 | 2 |
allantois | 5.17e-12 | 2 |
extraembryonic membrane | 1.88e-08 | 3 |
extraembryonic structure | 1.88e-08 | 3 |
membranous layer | 1.88e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.