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FFCP PHASE1:Mm9::chr7:107756070..107756132,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=19346|HGNC=|MCL_coexpression_id=36|UniProt=P35279,Q3U4W5,Q0PD54,Q0PD53|association_with_transcript=0bp_to_ENSMUST00000032946,NM_001163663,NM_024287,uc009ini.2,uc009inj.2_5end|description=CAGE_peak_2_at_Rab6a_5end|id=chr7:107756070..107756132,+|ontology_enrichment_celltype=CL:0000988!1.86e-09!32;CL:0002032!1.86e-09!32;CL:0000037!1.86e-09!32;CL:0000566!1.86e-09!32;CL:0000837!1.86e-09!32;CL:0000838!2.68e-08!12;CL:0002031!6.85e-08!25;CL:0000084!1.15e-07!11;CL:0000827!1.15e-07!11;CL:0000542!2.10e-07!13;CL:0000051!2.10e-07!13;CL:0000791!4.45e-07!9;CL:0000789!4.45e-07!9;CL:0002420!4.45e-07!9;CL:0002419!4.45e-07!9;CL:0000790!4.45e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.86e-09,32;CL:0002032,1.86e-09,32;CL:0000037,1.86e-09,32;CL:0000837,1.86e-09,32;CL:0000838,2.68e-08,12;CL:0002031,6.85e-08,25;CL:0000084,1.15e-07,11;CL:0000827,1.15e-07,11;CL:0000542,2.10e-07,13;CL:0000051,2.10e-07,13;CL:0000791,4.45e-07,9;CL:0000789,4.45e-07,9;CL:0002420,4.45e-07,9;CL:0002419,4.45e-07,9;CL:0000790,4.45e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.19e-10!48;UBERON:0002390!2.76e-09!45;UBERON:0003061!2.76e-09!45;UBERON:0004177!3.67e-09!29;UBERON:0002405!7.00e-08!70;UBERON:0000064!2.69e-07!99;UBERON:0002370!7.65e-07!23;UBERON:0000974!7.65e-07!23;UBERON:0004807!7.65e-07!23;UBERON:0005058!7.65e-07!23;UBERON:0003351!7.65e-07!23;UBERON:0009113!7.65e-07!23;UBERON:0003295!7.65e-07!23;UBERON:0009722!7.65e-07!23;UBERON:0005562!7.65e-07!23;UBERON:0007690!7.65e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.19e-10,48;UBERON:0002405,9.19e-10,48;UBERON:0002390,2.76e-09,45;UBERON:0003061,2.76e-09,45;UBERON:0004177,3.67e-09,29;UBERON:0005057,3.67e-09,29;UBERON:0000077,5.58e-08,35;UBERON:0002370,7.65e-07,23;UBERON:0000974,7.65e-07,23;UBERON:0004807,7.65e-07,23;UBERON:0005058,7.65e-07,23;UBERON:0003351,7.65e-07,23;UBERON:0009113,7.65e-07,23;UBERON:0003295,7.65e-07,23;UBERON:0009722,7.65e-07,23;UBERON:0005562,7.65e-07,23;UBERON:0007690,7.65e-07,23|phase1_expression=3.84357233051505,19.5426228278042,19.5649672937501,13.6108895088074,16.0286633582831,10.7442734023609,5.60670337429262,33.5720640948098,70.535149797985,53.1326474750925,29.7919264712379,26.1652681504703,42.457781022939,41.0001687345098,20.9859149943868,27.3341610976265,31.4802845157666,31.5462165358238,32.7703496317716,33.1023928402464,5.78294373027274,18.5674078745655,12.7987896678078,7.03966660290989,7.34109699414944,13.7815671387605,6.46142994238612,6.89507944594845,4.3705386474966,5.79669298447841,3.99114919179548,4.44521471421742,4.30545351309199,15.8481681015439,4.62162591602039,4.3221007793208,5.9209113316087,54.409111995798,46.0987853269042,53.3994218853274,100.587584453303,81.9654581950135,65.0583873061746,2.26614272356039,2.93993100536592,3.85448179539531,4.69434806608824,4.14247797122848,3.29529274101708,3.4997381833371,4.05960622713551,5.75010257459886,40.2678254538567,39.1695556686126,33.6093799142464,4.88792928468299,5.73066879877513,9.28209766099396,8.9019242778223,4.7609188134483,5.07065122804943,3.38844532069132,4.4464739805557,4.49949858640699,1.97773272513395,2.8419204597844,7.19040265244171,8.06858441175265,4.87341177849845,4.45519596494579,4.6271491497304,9.99778445413313,9.05561017901615,4.04219637409348,3.73797336971122,3.67687514644008,11.0115880999389,13.2794831608595,11.981309593987,6.72620067423989,6.03818447775904,5.2091337055676,13.1216009530649,9.56696437053856,12.6822545654752,7.36571463684169,8.39992916714707,5.21918448310842,14.3122505399718,11.7891633766585,8.11620568364698,2.58127163094416,8.15965600449301,2.69851595818909,5.84798775702902,4.48026887097336,6.88177658645584,1.87473354835864,1.29893002301434,1.06001872353102,6.33795388995062,0,2.54805239706646,0,4.76280290224671,3.29367825117628,6.0662933401774,6.2801133845483,21.4918443427153,3.11728492036132,3.81667718885499,4.56698217468212,5.30415643688935,3.76806601381556,3.64524992120685,4.52399728786832,7.16865406429684,7.66376591675532,24.7690954545965,7.92657564742305,17.2256384399107,13.5765070877862,1.86391761218122,10.2473278954042,7.33063473847093,7.40825460104915,18.3317140494058,16.197373736822,16.6461997465715,13.7807388252437,13.7250180845588,4.27224797183739,11.4724051326902,12.2743419518559,13.0906468072523,11.6813709408785,5.39748628406676,13.43595282589,4.0435641349388,6.10281382070775,3.77349284591841,5.0578462975364,4.68161537493908,5.42537344208574,5.8511389270142,4.48398020996974,7.21503279109912,9.31332134660456,5.17363183038821,3.02569728268511,4.39877810409872,2.84954452155847,3.89266148915837,6.61679116392116,3.70407845534298,5.9710280045548,10.5331978096985,15.4408744268829,14.4923384691752,12.0132948070591,7.97388603935727,7.02242039697958,7.10234206755631,6.29645541591692,5.707883176833,6.51095045301142,5.90201483079162,6.889155199663,9.70903114489535,7.05920095540109,6.48550476366846,7.01759939641595,9.87975518809728,4.42881181909227,13.24826675954,5.55684906848136,7.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|EntrezGene=19346
|HGNC=
|MCL_coexpression_id=36
|UniProt=P35279,Q3U4W5,Q0PD54,Q0PD53
|association_with_transcript=0bp_to_ENSMUST00000032946,NM_001163663,NM_024287,uc009ini.2,uc009inj.2_5end
|description=CAGE_peak_2_at_Rab6a_5end
|id=chr7:107756070..107756132,+
|ontology_enrichment_celltype=CL:0000988!1.86e-09!32;CL:0002032!1.86e-09!32;CL:0000037!1.86e-09!32;CL:0000566!1.86e-09!32;CL:0000837!1.86e-09!32;CL:0000838!2.68e-08!12;CL:0002031!6.85e-08!25;CL:0000084!1.15e-07!11;CL:0000827!1.15e-07!11;CL:0000542!2.10e-07!13;CL:0000051!2.10e-07!13;CL:0000791!4.45e-07!9;CL:0000789!4.45e-07!9;CL:0002420!4.45e-07!9;CL:0002419!4.45e-07!9;CL:0000790!4.45e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000988,1.86e-09,32;CL:0002032,1.86e-09,32;CL:0000037,1.86e-09,32;CL:0000837,1.86e-09,32;CL:0000838,2.68e-08,12;CL:0002031,6.85e-08,25;CL:0000084,1.15e-07,11;CL:0000827,1.15e-07,11;CL:0000542,2.10e-07,13;CL:0000051,2.10e-07,13;CL:0000791,4.45e-07,9;CL:0000789,4.45e-07,9;CL:0002420,4.45e-07,9;CL:0002419,4.45e-07,9;CL:0000790,4.45e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!9.19e-10!48;UBERON:0002390!2.76e-09!45;UBERON:0003061!2.76e-09!45;UBERON:0004177!3.67e-09!29;UBERON:0002405!7.00e-08!70;UBERON:0000064!2.69e-07!99;UBERON:0002370!7.65e-07!23;UBERON:0000974!7.65e-07!23;UBERON:0004807!7.65e-07!23;UBERON:0005058!7.65e-07!23;UBERON:0003351!7.65e-07!23;UBERON:0009113!7.65e-07!23;UBERON:0003295!7.65e-07!23;UBERON:0009722!7.65e-07!23;UBERON:0005562!7.65e-07!23;UBERON:0007690!7.65e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.19e-10,48;UBERON:0002405,9.19e-10,48;UBERON:0002390,2.76e-09,45;UBERON:0003061,2.76e-09,45;UBERON:0004177,3.67e-09,29;UBERON:0005057,3.67e-09,29;UBERON:0000077,5.58e-08,35;UBERON:0002370,7.65e-07,23;UBERON:0000974,7.65e-07,23;UBERON:0004807,7.65e-07,23;UBERON:0005058,7.65e-07,23;UBERON:0003351,7.65e-07,23;UBERON:0009113,7.65e-07,23;UBERON:0003295,7.65e-07,23;UBERON:0009722,7.65e-07,23;UBERON:0005562,7.65e-07,23;UBERON:0007690,7.65e-07,23
|phase1_expression=3.84357233051505,19.5426228278042,19.5649672937501,13.6108895088074,16.0286633582831,10.7442734023609,5.60670337429262,33.5720640948098,70.535149797985,53.1326474750925,29.7919264712379,26.1652681504703,42.457781022939,41.0001687345098,20.9859149943868,27.3341610976265,31.4802845157666,31.5462165358238,32.7703496317716,33.1023928402464,5.78294373027274,18.5674078745655,12.7987896678078,7.03966660290989,7.34109699414944,13.7815671387605,6.46142994238612,6.89507944594845,4.3705386474966,5.79669298447841,3.99114919179548,4.44521471421742,4.30545351309199,15.8481681015439,4.62162591602039,4.3221007793208,5.9209113316087,54.409111995798,46.0987853269042,53.3994218853274,100.587584453303,81.9654581950135,65.0583873061746,2.26614272356039,2.93993100536592,3.85448179539531,4.69434806608824,4.14247797122848,3.29529274101708,3.4997381833371,4.05960622713551,5.75010257459886,40.2678254538567,39.1695556686126,33.6093799142464,4.88792928468299,5.73066879877513,9.28209766099396,8.9019242778223,4.7609188134483,5.07065122804943,3.38844532069132,4.4464739805557,4.49949858640699,1.97773272513395,2.8419204597844,7.19040265244171,8.06858441175265,4.87341177849845,4.45519596494579,4.6271491497304,9.99778445413313,9.05561017901615,4.04219637409348,3.73797336971122,3.67687514644008,11.0115880999389,13.2794831608595,11.981309593987,6.72620067423989,6.03818447775904,5.2091337055676,13.1216009530649,9.56696437053856,12.6822545654752,7.36571463684169,8.39992916714707,5.21918448310842,14.3122505399718,11.7891633766585,8.11620568364698,2.58127163094416,8.15965600449301,2.69851595818909,5.84798775702902,4.48026887097336,6.88177658645584,1.87473354835864,1.29893002301434,1.06001872353102,6.33795388995062,0,2.54805239706646,0,4.76280290224671,3.29367825117628,6.0662933401774,6.2801133845483,21.4918443427153,3.11728492036132,3.81667718885499,4.56698217468212,5.30415643688935,3.76806601381556,3.64524992120685,4.52399728786832,7.16865406429684,7.66376591675532,24.7690954545965,7.92657564742305,17.2256384399107,13.5765070877862,1.86391761218122,10.2473278954042,7.33063473847093,7.40825460104915,18.3317140494058,16.197373736822,16.6461997465715,13.7807388252437,13.7250180845588,4.27224797183739,11.4724051326902,12.2743419518559,13.0906468072523,11.6813709408785,5.39748628406676,13.43595282589,4.0435641349388,6.10281382070775,3.77349284591841,5.0578462975364,4.68161537493908,5.42537344208574,5.8511389270142,4.48398020996974,7.21503279109912,9.31332134660456,5.17363183038821,3.02569728268511,4.39877810409872,2.84954452155847,3.89266148915837,6.61679116392116,3.70407845534298,5.9710280045548,10.5331978096985,15.4408744268829,14.4923384691752,12.0132948070591,7.97388603935727,7.02242039697958,7.10234206755631,6.29645541591692,5.707883176833,6.51095045301142,5.90201483079162,6.889155199663,9.70903114489535,7.05920095540109,6.48550476366846,7.01759939641595,9.87975518809728,4.42881181909227,13.24826675954,5.55684906848136,7.26921322564356,8.19796756656987,4.69234151177515,3.0190767341857,5.92790322081629,4.43703754171354,4.66993892074228,5.32631753115166,7.11793592316767,6.75265714368445,6.03204501120647,4.17808591286417,4.874102177978,5.39291645192533,4.97117514711797,4.97853183135918,5.12103332573321,3.54170389090159,5.63538678365402,2.24016460629846,2.13347735884388,5.47059395144485,4.93244989569207,4.72352473534727,5.02395929092399,4.31890073726302,2.66807364378434,15.5165948315967,11.596980711679,16.6397963164792,18.4602710463538,14.9529839046498,14.2590476997595,13.2340223227373,9.72811360650212,8.23684239564244,4.31304619582064,4.09355042435354,7.48890415474945,4.2938409251009,4.4849353380478,3.37710464954357,12.9327233116623,6.06372517665551,4.56301934037672,5.26209765903083,3.75504397261603,5.86271901046355,6.18913466303636,8.00047956216975,8.6699329258405,7.30833475840957,9.56728611944923,8.84861899464985,10.5337838938196,7.81104916340163,3.01582567878545,3.26343410291226,4.91764273019036,4.41498794087572,20.068823748474,20.9808919000044,2.13115428989678,3.53459298086122,7.57219726599016,9.37052986311932,8.18608911384636,6.69112634267146,9.13474563737816,9.34152551603147,10.1202675418724,7.01414058987149,8.69633111482352,6.10510501201433,7.38088443082997,5.34196811001766,4.56083486190013,5.93892442701128,1.32745138339963,2.42780636154981,1.81394134178851,3.20628635585027,2.65771703592696,5.53383266299069,4.9101375701962,2.54473610634254,2.85197902707777,3.16036757935816,4.21674434299995,3.09406629744561,4.42571487479924,2.52085531643834,2.45781499187234,2.7863814554107,5.49754724291048,6.77801506887868,4.77192159746151,4.26250928760439,5.39744928546534,7.62595455109753,3.96951116498931,4.28704257647848,5.65125493435669,7.17723806645055,8.47543642422269,13.459553779095,6.99554007911642,22.9927374493032,23.4093106693058,7.01715351074956,14.8155621895769,27.5017947226849,28.5690935936943,29.9699406900545,22.0971958992012,23.2319410857272,23.7703954943609,5.72802370809068,5.53587988766987,3.86306987541013,3.45617090629764,2.71814784818809,3.9305261474312,3.64133735239016,4.29797969771747,4.97336289769656,3.88844919875379,4.97071450469541,6.76431526421028,5.53211220362722,8.43838301331198,5.63908446197738,4.26227417476513,4.05494701177868,5.04636126176742,5.85919731797776,12.687980675511,6.52277126230216,5.76060012515731,29.0730230977924,7.29810775044591,8.21687657318618,10.6535074841792,16.2914293057408,20.0668168329078,22.3563536107142,19.9380861685679,21.4048873890073,22.25238754326,22.786717840926,28.1653275337884,26.7468919760116,26.9985644039424,6.12172035761071,3.10780334723691,4.30626511725483,6.88326927092722,5.9888774149979,5.44279178808428,6.41030684935428,6.64541975145104,4.01257683228291,10.1655331671072,9.20650473014354,12.6037012956667,7.73339320546594,17.1270629942661,7.55393897389701,12.8254275044043,11.7083512838297,10.8754178156209,12.9440077937955,4.67043064128795,4.38927360741134,4.78054096111576,7.05009479498053,5.8691685535835,6.80220981265052,3.55594764482584,4.32673620201678,4.49286893428541,5.81203587056734,4.81610669791456,6.22466926574051,4.30750934361459,5.12201219238954,4.88201486122713,7.1444053692461,4.86714168968393,5.20854895252004,2.88460130562315,5.2991611248383,3.77156177623957,3.72699192934609,3.81497903915713,6.1045494985578,5.08190654242785,4.39995961036718,4.57319932181931,3.41990624869196,4.34573164306758,3.92799590160417,4.62676570684279,3.74317033027141,2.45538625901814,2.94379998253335,6.36591816237767,5.74564329257276,4.67863216890817,3.00819475667618,4.3996316375834,5.07360263974886,9.27471342481686
|short_description=p2@Rab6a
}}

Revision as of 11:16, 14 September 2013

Short description:p2@Rab6a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab6a_5end
Coexpression cluster:MCL_coexpression_mm9:36
Association with transcript: 0bp_to_ENSMUST00000032946, NM_001163663, NM_024287, uc009ini.2, uc009inj.2_5end
EntrezGene:Rab6a
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Rab6a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I519.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I619.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.61
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E933.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E770.54
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F253.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E629.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F126.17
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E442.46
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E841.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A327.33
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A531.48
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A231.55
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A432.77
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A633.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.80
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.34
GP2+ M cell, pool1.CNhs13228.11845-124H913.78
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I26.90
Ileum epithelium, pool1.CNhs13199.10252-104B94.37
Ileum epithelium, pool2.CNhs13232.10253-104C15.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G854.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H146.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H353.40
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9100.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H281.97
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H465.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A240.27
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I939.17
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A133.61
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C38.90
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D914.31
Mouse Schwann, donor2.CNhs12573.11746-123F911.79
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.28
accessory axillary lymph node, adult.CNhs10475.1063-29H921.49
adrenal gland, adult.CNhs10508.49-24D73.12
adrenal gland, embryo E14.CNhs11038.406-44C53.82
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C13.65
adrenal gland, neonate N25.CNhs11223.1377-27I34.52
amnion, adult pregnant day17.5.CNhs10488.583-22A87.17
aorta, adult.CNhs10498.46-23H17.66
bone (os femoris), adult.CNhs10483.56-12G224.77
bone (os femoris), neonate N02.CNhs11227.1985-43F57.93
bone (os femoris), neonate N16.CNhs11225.1525-43A617.23
bone (os femoris), neonate N20.CNhs11195.1350-25C313.58
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C718.33
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.65
corpora quadrigemina, adult.CNhs10501.16-22A413.78
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D511.47
cortex, neonate N30.CNhs11107.1392-42F212.27
diencephalon, adult.CNhs10482.20-12F213.09
diencephalon, neonate N30.CNhs11201.1388-42B211.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.40
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.44
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D45.43
eyeball, neonate N00.CNhs11207.633-15C65.85
eyeball, neonate N01.CNhs11140.1532-43E74.48
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A29.31
forelimb, embryo E11.CNhs10596.335-25E25.17
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I65.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C810.53
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.44
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D514.49
heart, embryo E11.CNhs10586.331-24E912.01
heart, embryo E12.CNhs11015.353-12F57.97
heart, embryo E13.CNhs11013.376-3I97.02
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C86.30
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E56.51
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E36.89
heart, neonate N03.CNhs11221.1349-25I29.71
heart, neonate N10.CNhs11118.749-24G17.06
heart, neonate N16.CNhs11209.782-15G16.49
heart, neonate N20.CNhs11127.821-26I67.02
heart, neonate N25.CNhs11196.1351-25D39.88
heart, neonate N30.CNhs11202.1390-42D24.43
hippocampus, adult.CNhs10478.13-16E813.25
hippocampus, neonate N00.CNhs11228.627-43G15.56
intestinal mucosa, adult.CNhs10506.860-29I37.27
intestine, adult.CNhs10496.178-9A38.20
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D85.93
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F75.33
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E96.75
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G75.47
kidney, neonate N10.CNhs11206.758-6D54.93
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F35.02
kidney, neonate N30.CNhs11203.1385-42H14.32
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F815.52
liver, embryo E13.CNhs10524.378-3H611.60
liver, embryo E14.CNhs10594.409-16E116.64
liver, embryo E15.CNhs10520.433-16D718.46
liver, embryo E16.CNhs10523.462-17F514.95
liver, embryo E17.CNhs10510.481-18A314.26
liver, embryo E18.CNhs10579.499-43G413.23
liver, neonate N00.CNhs11117.641-24F49.73
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B97.49
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H14.48
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B112.93
lung, embryo E12.CNhs10522.354-16G26.06
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C55.26
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A65.86
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C68.00
lung, neonate N06.CNhs11212.683-20E58.67
lung, neonate N07.CNhs11111.715-19A37.31
lung, neonate N10.CNhs11219.750-23E69.57
lung, neonate N20.CNhs11109.822-18A48.85
lung, neonate N25.CNhs11119.1359-25C710.53
lung, neonate N30.CNhs11133.1394-42H27.81
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C220.07
medulla oblongata, neonate N30.CNhs11200.1396-42A320.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.12
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I77.38
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G65.94
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F66.78
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G45.65
skin, neonate N03.CNhs11215.662-22H37.18
skin, neonate N06.CNhs11097.693-20I58.48
skin, neonate N10.CNhs11108.762-6C413.46
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C922.99
spleen, adult.CNhs10465.25-2G223.41
spleen, embryo E16.CNhs11035.461-43C17.02
spleen, embryo E18.CNhs11011.1271-21F214.82
spleen, neonate N10.CNhs11116.752-24D127.50
spleen, neonate N20.CNhs11112.824-19H128.57
spleen, neonate N25.CNhs11099.1354-25G329.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C923.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.77
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E35.54
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D43.46
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A94.30
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I13.89
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F55.53
testis, embryo E15.CNhs11034.443-27C58.44
testis, embryo E16.CNhs11033.470-26G55.64
testis, embryo E17.CNhs11029.486-18I54.26
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B75.05
testis, neonate N07.CNhs11222.726-26I45.86
testis, neonate N10.CNhs11204.763-44D912.69
testis, neonate N20.CNhs11110.839-18H36.52
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B529.07
thymus, embryo E14.CNhs11041.402-44I47.30
thymus, embryo E15.CNhs11005.430-45I28.22
thymus, embryo E16.CNhs11002.456-26C510.65
thymus, embryo E17.CNhs10581.478-18C116.29
thymus, embryo E18.CNhs10595.1273-19G420.07
thymus, neonate N02.CNhs11181.1541-43F822.36
thymus, neonate N03.CNhs11137.2104-43C719.94
thymus, neonate N06.CNhs11197.681-26C421.40
thymus, neonate N07.CNhs11211.713-19D322.25
thymus, neonate N10.CNhs11194.748-24E422.79
thymus, neonate N20.CNhs11186.820-7A228.17
thymus, neonate N25.CNhs11125.1362-25G726.75
thymus, neonate N30.CNhs11132.1393-42G227.00
tongue, adult.CNhs10499.32-1B46.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.31
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.88
urinary bladder, adult.CNhs10481.879-12E45.99
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D56.65
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I84.67
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.88
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B49.27





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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