FFCP PHASE1:Mm9::chr4:123284381..123284386,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=182|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:123284381..123284386,-|id=chr4:123284381..123284386,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!1.23e-08!14;UBERON:0000117!1.23e-08!14;UBERON:0000171!1.23e-08!14;UBERON:0000170!1.23e-08!14;UBERON:0005597!1.23e-08!14;UBERON:0000118!1.23e-08!14;UBERON:0005153!2.53e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.52e-25,14;UBERON:0000117,2.52e-25,14;UBERON:0000171,2.52e-25,14;UBERON:0000170,2.52e-25,14;UBERON:0005597,2.52e-25,14;UBERON:0000118,2.52e-25,14;UBERON:0005153,1.02e-20,17;UBERON:0005178,1.02e-20,17;UBERON:0005181,1.02e-20,17;UBERON:0002224,1.02e-20,17;UBERON:0000915,1.02e-20,17;UBERON:0008947,1.02e-20,17;UBERON:0003258,1.02e-20,17;UBERON:0005157,1.73e-17,20;UBERON:0001004,5.59e-10,42;UBERON:0000065,4.50e-08,41;UBERON:0001044,4.68e-07,1;UBERON:0001736,4.68e-07,1;UBERON:0003293,4.68e-07,1;UBERON:0003294,4.68e-07,1;UBERON:0001829,4.68e-07,1;UBERON:0010047,4.68e-07,1;UBERON:0000167,4.68e-07,1;UBERON:0006298,4.68e-07,1|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0,0,0,0.485300549842228,0.220841518460394,1.45462575940567,0,0.292780797011547,0.628340120440365,0,0,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,1.02286182932132,0,0,0.305518091550949,0,0,0,0.390361328888111,0,0.180062129805349,0.60281927134286,0.408218994907967,0.896796041993948,0.655912071918102,0.776110112217047,0,0,0.351902248327898,0,1.11218899690239,1.0447564995665,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0.462801338662135,0,0.536546802799238,0.233530684734339,0.987359099480883,0.820837320395476,0.0810688095458557,0,0,0,0,0.102904612379284,0,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,1.25667604400135,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0.775809948670503,0.771494018793504,0.569128834118316,0.147610147979602,0.31399745568275,0.493588655687202,0,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0.486405680325106,0.549122826376163,1.43768206527355,0.372140947668503,0,0.505157755894224,0,0,0.739012760666419,0.189491411770485,0,0.169745085775188,1.17345124144251,0.837531287209079,0.714130922658041,2.73187107000918,2.20689201748667,2.87904096543407,2.39182152986231,2.78567635016755,3.9717545829156,2.31438493730419,0,0,0,0,0.321101179975584,0.117211686592203,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0.428674070063185,0,0,0,0,0,0.42366414172764,0.441056796109924,0.16488625294148,0.161464426695906,0.301564624640779,0.358117032009409,0.328281799490123,0,0.18542530201051,0.170870880797853,0,0.370389054739423,0.376736914009382,0.410082683163076,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.330613822901344,0,0.129614973291793,2.4853572523477,0,0,0.330916980914195,0,0,0.337912250981556,0.821500670520278,0.13020438484395,0.104859344425711,0.724752362478018,0.864090018773596,0.316011120628178,0.202725215290164,0.102710957164827,0.25984164595559,0,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,1.12950368523413,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0,0.51776031175182,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.0640251524048693,0.17230640686684,0.952587382566147,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.70990322463735,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0,0.407412341537585,0.561142271657738,0.118635018124174,0,0,0.309873682371932,0,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p@chr4:123284381..123284386,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=182 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:123284381..123284386,- | |||
|id=chr4:123284381..123284386,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.23e-08!14;UBERON:0000117!1.23e-08!14;UBERON:0000171!1.23e-08!14;UBERON:0000170!1.23e-08!14;UBERON:0005597!1.23e-08!14;UBERON:0000118!1.23e-08!14;UBERON:0005153!2.53e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.52e-25,14;UBERON:0000117,2.52e-25,14;UBERON:0000171,2.52e-25,14;UBERON:0000170,2.52e-25,14;UBERON:0005597,2.52e-25,14;UBERON:0000118,2.52e-25,14;UBERON:0005153,1.02e-20,17;UBERON:0005178,1.02e-20,17;UBERON:0005181,1.02e-20,17;UBERON:0002224,1.02e-20,17;UBERON:0000915,1.02e-20,17;UBERON:0008947,1.02e-20,17;UBERON:0003258,1.02e-20,17;UBERON:0005157,1.73e-17,20;UBERON:0001004,5.59e-10,42;UBERON:0000065,4.50e-08,41;UBERON:0001044,4.68e-07,1;UBERON:0001736,4.68e-07,1;UBERON:0003293,4.68e-07,1;UBERON:0003294,4.68e-07,1;UBERON:0001829,4.68e-07,1;UBERON:0010047,4.68e-07,1;UBERON:0000167,4.68e-07,1;UBERON:0006298,4.68e-07,1 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.301445281105245,0.117588707135705,0.251333182659351,0,0,0,0.485300549842228,0.220841518460394,1.45462575940567,0,0.292780797011547,0.628340120440365,0,0,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,1.02286182932132,0,0,0.305518091550949,0,0,0,0.390361328888111,0,0.180062129805349,0.60281927134286,0.408218994907967,0.896796041993948,0.655912071918102,0.776110112217047,0,0,0.351902248327898,0,1.11218899690239,1.0447564995665,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0,0,0.462801338662135,0,0.536546802799238,0.233530684734339,0.987359099480883,0.820837320395476,0.0810688095458557,0,0,0,0,0.102904612379284,0,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,1.25667604400135,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0.775809948670503,0.771494018793504,0.569128834118316,0.147610147979602,0.31399745568275,0.493588655687202,0,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0.486405680325106,0.549122826376163,1.43768206527355,0.372140947668503,0,0.505157755894224,0,0,0.739012760666419,0.189491411770485,0,0.169745085775188,1.17345124144251,0.837531287209079,0.714130922658041,2.73187107000918,2.20689201748667,2.87904096543407,2.39182152986231,2.78567635016755,3.9717545829156,2.31438493730419,0,0,0,0,0.321101179975584,0.117211686592203,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0.428674070063185,0,0,0,0,0,0.42366414172764,0.441056796109924,0.16488625294148,0.161464426695906,0.301564624640779,0.358117032009409,0.328281799490123,0,0.18542530201051,0.170870880797853,0,0.370389054739423,0.376736914009382,0.410082683163076,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.330613822901344,0,0.129614973291793,2.4853572523477,0,0,0.330916980914195,0,0,0.337912250981556,0.821500670520278,0.13020438484395,0.104859344425711,0.724752362478018,0.864090018773596,0.316011120628178,0.202725215290164,0.102710957164827,0.25984164595559,0,0,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,1.12950368523413,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0,0.51776031175182,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.0640251524048693,0.17230640686684,0.952587382566147,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.70990322463735,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0,0.407412341537585,0.561142271657738,0.118635018124174,0,0,0.309873682371932,0,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p@chr4:123284381..123284386,- | |||
}} |
Revision as of 03:43, 14 September 2013
Short description: | p@chr4:123284381..123284386, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:123284381..123284386, - |
Coexpression cluster: | MCL_coexpression_mm9:182 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 2.52e-25 | 14 |
respiratory tube | 2.52e-25 | 14 |
respiration organ | 2.52e-25 | 14 |
pair of lungs | 2.52e-25 | 14 |
lung primordium | 2.52e-25 | 14 |
lung bud | 2.52e-25 | 14 |
epithelial bud | 1.02e-20 | 17 |
thoracic cavity element | 1.02e-20 | 17 |
thoracic segment organ | 1.02e-20 | 17 |
thoracic cavity | 1.02e-20 | 17 |
thoracic segment of trunk | 1.02e-20 | 17 |
respiratory primordium | 1.02e-20 | 17 |
endoderm of foregut | 1.02e-20 | 17 |
epithelial fold | 1.73e-17 | 20 |
respiratory system | 5.59e-10 | 42 |
respiratory tract | 4.50e-08 | 41 |
saliva-secreting gland | 4.68e-07 | 1 |
submandibular gland | 4.68e-07 | 1 |
gland of oral region | 4.68e-07 | 1 |
gland of foregut | 4.68e-07 | 1 |
major salivary gland | 4.68e-07 | 1 |
oral gland | 4.68e-07 | 1 |
oral cavity | 4.68e-07 | 1 |
submandibular gland primordium | 4.68e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.