FFCP PHASE1:Mm9::chr5:42158898..42158902,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=375|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:42158898..42158902,+|id=chr5:42158898..42158902,+|ontology_enrichment_celltype=CL:0000063!5.86e-18!66;CL:0000791!5.99e-16!9;CL:0000789!5.99e-16!9;CL:0002420!5.99e-16!9;CL:0002419!5.99e-16!9;CL:0000790!5.99e-16!9;CL:0000084!1.15e-15!11;CL:0000827!1.15e-15!11;CL:0000144!8.84e-15!121;CL:0000012!8.84e-15!121;CL:0000838!3.45e-14!12;CL:0000624!3.51e-14!8;CL:0000548!8.18e-14!115;CL:0000004!8.18e-14!115;CL:0000255!8.18e-14!115;CL:0002371!2.99e-13!118;CL:0000542!6.12e-13!13;CL:0000051!6.12e-13!13;CL:0002076!1.75e-12!15;CL:0000738!1.12e-11!17;CL:0002087!1.12e-11!17;CL:0000223!8.78e-11!20;CL:0000893!1.43e-10!6;CL:0002489!1.43e-10!6;CL:0000898!1.43e-10!6;CL:0000809!1.43e-10!6;CL:0000810!1.43e-10!6;CL:0000895!1.43e-10!6;CL:0000808!1.43e-10!6;CL:0000894!1.43e-10!6;CL:0000806!1.43e-10!6;CL:0000807!1.43e-10!6;CL:0000805!1.43e-10!6;CL:0002425!1.43e-10!6;CL:0002436!1.43e-10!6;CL:0002427!1.43e-10!6;CL:0002428!1.43e-10!6;CL:0002429!1.43e-10!6;CL:0002433!1.43e-10!6;CL:0002431!1.43e-10!6;CL:0002432!1.43e-10!6;CL:0002031!1.79e-10!25;CL:0000066!1.01e-09!25;CL:0000219!5.04e-09!54;CL:0002320!1.03e-08!46;CL:0000134!1.03e-08!46;CL:0000239!1.79e-08!6;CL:0000677!1.79e-08!6;CL:0000212!1.79e-08!6;CL:0000584!1.79e-08!6;CL:0000068!9.58e-08!3;CL:0002202!9.58e-08!3;CL:0000069!9.58e-08!3;CL:0002632!9.58e-08!3;CL:0002368!9.58e-08!3;CL:0000307!9.58e-08!3;CL:0000377!9.58e-08!3;CL:0000988!1.48e-07!32;CL:0002032!1.48e-07!32;CL:0000037!1.48e-07!32;CL:0000566!1.48e-07!32;CL:0000837!1.48e-07!32;CL:0002563!1.85e-07!9;CL:0002251!1.85e-07!9;CL:0000075!3.36e-07!7;CL:0000215!5.93e-07!3|ontology_enrichment_celltype_v019_2=CL:0000068,7.19e-20,3;CL:0002202,7.19e-20,3;CL:0000069,7.19e-20,3;CL:0002632,7.19e-20,3;CL:0002368,7.19e-20,3;CL:0000307,7.19e-20,3;CL:0000377,7.19e-20,3;CL:0002076,6.24e-15,15;CL:0000223,3.97e-11,20;CL:0000066,7.76e-09,25;CL:0000057,1.33e-07,1;CL:0000632,1.33e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.16e-12!15;UBERON:0001242!8.09e-09!13;UBERON:0000060!8.09e-09!13;UBERON:0001262!8.09e-09!13;UBERON:0004786!8.09e-09!13;UBERON:0002384!1.03e-08!46;UBERON:0003126!9.58e-08!3;UBERON:0001005!9.58e-08!3;UBERON:0007196!9.58e-08!3;UBERON:0001558!9.58e-08!3;UBERON:0003350!1.85e-07!9;UBERON:0004808!1.85e-07!9;UBERON:0001277!1.85e-07!9;UBERON:0003929!2.73e-07!55;UBERON:0004923!7.64e-07!24;UBERON:0000072!8.94e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0003126,7.19e-20,3;UBERON:0001005,7.19e-20,3;UBERON:0007196,7.19e-20,3;UBERON:0001558,7.19e-20,3;UBERON:0001962,3.90e-14,2;UBERON:0001961,3.90e-14,2;UBERON:0001744,3.90e-14,2;UBERON:0000344,1.60e-10,15;UBERON:0002465,9.97e-10,3;UBERON:0003199,6.29e-08,1|phase1_expression=0,0,0.454999239389536,0.90739263392049,1.00179145989269,0.16787927191189,1.16806320297763,0.774739940649458,0.281577444303333,0.468129052643987,0.513653904676515,0.239316476986009,0.171200729931206,0.0874204024189974,0,0,0,1.10411757875383,0,0.42438965179803,0,0,0.261199789138935,3.19984845586813,3.21172993494038,0,0.430761996159075,0,3.04037471130198,0,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,1.43585964202892,0.869593466105033,1.72084775396277,0,0,0,0,0,0,0.519572009205738,3.18005617059306,0,0,5.09610479413291,0,2.81438353314578,4.30711771307668,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0.179427713218951,0.503653849092235,0,0,0,0,0,0,0,0,0.68741272937475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:42158898..42158902,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=375 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:42158898..42158902,+ | |||
|id=chr5:42158898..42158902,+ | |||
|ontology_enrichment_celltype=CL:0000063!5.86e-18!66;CL:0000791!5.99e-16!9;CL:0000789!5.99e-16!9;CL:0002420!5.99e-16!9;CL:0002419!5.99e-16!9;CL:0000790!5.99e-16!9;CL:0000084!1.15e-15!11;CL:0000827!1.15e-15!11;CL:0000144!8.84e-15!121;CL:0000012!8.84e-15!121;CL:0000838!3.45e-14!12;CL:0000624!3.51e-14!8;CL:0000548!8.18e-14!115;CL:0000004!8.18e-14!115;CL:0000255!8.18e-14!115;CL:0002371!2.99e-13!118;CL:0000542!6.12e-13!13;CL:0000051!6.12e-13!13;CL:0002076!1.75e-12!15;CL:0000738!1.12e-11!17;CL:0002087!1.12e-11!17;CL:0000223!8.78e-11!20;CL:0000893!1.43e-10!6;CL:0002489!1.43e-10!6;CL:0000898!1.43e-10!6;CL:0000809!1.43e-10!6;CL:0000810!1.43e-10!6;CL:0000895!1.43e-10!6;CL:0000808!1.43e-10!6;CL:0000894!1.43e-10!6;CL:0000806!1.43e-10!6;CL:0000807!1.43e-10!6;CL:0000805!1.43e-10!6;CL:0002425!1.43e-10!6;CL:0002436!1.43e-10!6;CL:0002427!1.43e-10!6;CL:0002428!1.43e-10!6;CL:0002429!1.43e-10!6;CL:0002433!1.43e-10!6;CL:0002431!1.43e-10!6;CL:0002432!1.43e-10!6;CL:0002031!1.79e-10!25;CL:0000066!1.01e-09!25;CL:0000219!5.04e-09!54;CL:0002320!1.03e-08!46;CL:0000134!1.03e-08!46;CL:0000239!1.79e-08!6;CL:0000677!1.79e-08!6;CL:0000212!1.79e-08!6;CL:0000584!1.79e-08!6;CL:0000068!9.58e-08!3;CL:0002202!9.58e-08!3;CL:0000069!9.58e-08!3;CL:0002632!9.58e-08!3;CL:0002368!9.58e-08!3;CL:0000307!9.58e-08!3;CL:0000377!9.58e-08!3;CL:0000988!1.48e-07!32;CL:0002032!1.48e-07!32;CL:0000037!1.48e-07!32;CL:0000566!1.48e-07!32;CL:0000837!1.48e-07!32;CL:0002563!1.85e-07!9;CL:0002251!1.85e-07!9;CL:0000075!3.36e-07!7;CL:0000215!5.93e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.19e-20,3;CL:0002202,7.19e-20,3;CL:0000069,7.19e-20,3;CL:0002632,7.19e-20,3;CL:0002368,7.19e-20,3;CL:0000307,7.19e-20,3;CL:0000377,7.19e-20,3;CL:0002076,6.24e-15,15;CL:0000223,3.97e-11,20;CL:0000066,7.76e-09,25;CL:0000057,1.33e-07,1;CL:0000632,1.33e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.16e-12!15;UBERON:0001242!8.09e-09!13;UBERON:0000060!8.09e-09!13;UBERON:0001262!8.09e-09!13;UBERON:0004786!8.09e-09!13;UBERON:0002384!1.03e-08!46;UBERON:0003126!9.58e-08!3;UBERON:0001005!9.58e-08!3;UBERON:0007196!9.58e-08!3;UBERON:0001558!9.58e-08!3;UBERON:0003350!1.85e-07!9;UBERON:0004808!1.85e-07!9;UBERON:0001277!1.85e-07!9;UBERON:0003929!2.73e-07!55;UBERON:0004923!7.64e-07!24;UBERON:0000072!8.94e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,7.19e-20,3;UBERON:0001005,7.19e-20,3;UBERON:0007196,7.19e-20,3;UBERON:0001558,7.19e-20,3;UBERON:0001962,3.90e-14,2;UBERON:0001961,3.90e-14,2;UBERON:0001744,3.90e-14,2;UBERON:0000344,1.60e-10,15;UBERON:0002465,9.97e-10,3;UBERON:0003199,6.29e-08,1 | |||
|phase1_expression=0,0,0.454999239389536,0.90739263392049,1.00179145989269,0.16787927191189,1.16806320297763,0.774739940649458,0.281577444303333,0.468129052643987,0.513653904676515,0.239316476986009,0.171200729931206,0.0874204024189974,0,0,0,1.10411757875383,0,0.42438965179803,0,0,0.261199789138935,3.19984845586813,3.21172993494038,0,0.430761996159075,0,3.04037471130198,0,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,1.43585964202892,0.869593466105033,1.72084775396277,0,0,0,0,0,0,0.519572009205738,3.18005617059306,0,0,5.09610479413291,0,2.81438353314578,4.30711771307668,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.221985953374065,0.179427713218951,0.503653849092235,0,0,0,0,0,0,0,0,0.68741272937475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:42158898..42158902,+ | |||
}} |
Revision as of 07:39, 14 September 2013
Short description: | p@chr5:42158898..42158902, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:42158898..42158902, + |
Coexpression cluster: | MCL_coexpression_mm9:375 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.19e-20 | 3 |
epithelial cell of tracheobronchial tree | 7.19e-20 | 3 |
branched duct epithelial cell | 7.19e-20 | 3 |
epithelial cell of lower respiratory tract | 7.19e-20 | 3 |
respiratory epithelial cell | 7.19e-20 | 3 |
tracheal epithelial cell | 7.19e-20 | 3 |
tracheoblast | 7.19e-20 | 3 |
endo-epithelial cell | 6.24e-15 | 15 |
endodermal cell | 3.97e-11 | 20 |
epithelial cell | 7.76e-09 | 25 |
fibroblast | 1.33e-07 | 1 |
hepatic stellate cell | 1.33e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
trachea | 7.19e-20 | 3 |
respiratory airway | 7.19e-20 | 3 |
tracheobronchial tree | 7.19e-20 | 3 |
lower respiratory tract | 7.19e-20 | 3 |
gut-associated lymphoid tissue | 3.90e-14 | 2 |
mucosa-associated lymphoid tissue | 3.90e-14 | 2 |
lymphoid tissue | 3.90e-14 | 2 |
mucosa | 1.60e-10 | 15 |
lymphoid system | 9.97e-10 | 3 |
egg chamber | 6.29e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.