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FFCP PHASE1:Mm9::chr10:88996336..88996380,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20186|HGNC=|MCL_coexpression_id=8|UniProt=D3YTT2|association_with_transcript=0bp_to_NM_001163504,uc007gsh.2_5end|description=CAGE_peak_2_at_Nr1h4_5end|id=chr10:88996336..88996380,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!1.20e-14!23;UBERON:0009856!1.20e-14!23;UBERON:0002107!3.07e-14!22;UBERON:0007499!3.07e-14!22;UBERON:0006925!3.07e-14!22;UBERON:0009497!3.07e-14!22;UBERON:0000015!3.07e-14!22;UBERON:0002423!3.07e-14!22;UBERON:0006235!3.07e-14!22;UBERON:0008835!3.07e-14!22;UBERON:0003894!3.07e-14!22;UBERON:0004161!3.07e-14!22;UBERON:0008836!3.07e-14!22;UBERON:0005256!7.66e-12!47;UBERON:0002365!1.29e-11!25;UBERON:0002330!1.29e-11!25;UBERON:0003914!1.41e-11!47;UBERON:0005172!8.30e-11!49;UBERON:0005173!8.30e-11!49;UBERON:0002417!8.30e-11!49;UBERON:0000916!8.30e-11!49;UBERON:0000160!1.16e-10!43;UBERON:0001007!2.47e-09!128;UBERON:0001555!2.47e-09!128;UBERON:0007026!2.47e-09!128;UBERON:0004119!3.93e-09!130;UBERON:0000925!3.93e-09!130;UBERON:0006595!3.93e-09!130;UBERON:0005409!4.29e-09!59;UBERON:0004921!6.30e-09!126;UBERON:0004185!6.30e-09!126;UBERON:0009569!6.37e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.66e-18,23;UBERON:0009856,3.66e-18,23;UBERON:0002107,1.21e-17,22;UBERON:0007499,1.21e-17,22;UBERON:0006925,1.21e-17,22;UBERON:0009497,1.21e-17,22;UBERON:0000015,1.21e-17,22;UBERON:0002423,1.21e-17,22;UBERON:0006235,1.21e-17,22;UBERON:0008835,1.21e-17,22;UBERON:0003894,1.21e-17,22;UBERON:0004161,1.21e-17,22;UBERON:0008836,1.21e-17,22;UBERON:0005256,1.45e-16,45;UBERON:0002365,2.32e-14,25;UBERON:0002330,2.32e-14,25;UBERON:0005172,1.41e-11,49;UBERON:0005173,1.41e-11,49;UBERON:0002417,1.41e-11,49;UBERON:0000916,1.41e-11,49;UBERON:0003104,1.83e-11,61;UBERON:0009142,1.83e-11,61;UBERON:0003914,5.03e-10,47;UBERON:0000160,6.42e-09,31;UBERON:0002100,2.93e-07,90;UBERON:0000949,4.18e-07,72;UBERON:0005177,6.22e-07,79|phase1_expression=0,1.04692622291808,1.81999695755814,3.62957053568196,2.50447864973174,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,1.75991665072747,1.83527424853736,1.72269589234506,3.4460959692726,1.72376986148711,22.8028103347649,7.81293402255785,7.53883736228036,0,0,0,1.44425809875637,0.664938581433969,0.816677425049476,0,0,0,0,0,0,1.25896817975577,1.01376931219515,1.10128051297009,0,0,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,7.97504251711436,7.16333599846892,4.64104883049698,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,1.66597625333005,1.20914496170857,11.5945795480671,31.8356834483113,8.83962733820076,26.9851595818909,41.5856907166508,65.8599524033083,13.2017754923847,0.170430322578058,0,0,0,0,0,0,0,0,0,13.0169622879728,0.517875767294343,19.8912466346865,2.94925055502431,8.52503339273995,13.3756988408514,13.1128697280782,14.345822270556,17.2163230121655,9.64060374164058,0.86759614151947,0,0.161766849947409,0,0,5.59175283654366,0,0,10.9846533739694,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0.420883711772948,0,0,0,0.60281927134286,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0,0,0.617068451549513,0.697601834251224,0.268273401399619,1.63471479314037,1.15191894939436,0.32833492815819,0.810688095458557,1.60819986167866,1.53685080703735,1.34206418760372,0,0,6.60837565967596,1.58670339998127,0,0.232236671860439,0.644337306610467,6.05050573870028,7.33847544688072,16.3594038456801,8.0669940462567,11.8583247401288,11.8127548136127,15.1206918751275,11.8928093142663,6.29173586057955,9.29393614461185,4.97853183135918,0,0.685491075658373,0,0,0.969762435838129,0.911765658574141,2.71917109634306,2.65698266363284,3.767969468193,2.83813477020141,59.5869780445169,1.33476084572875,1.37591296579242,4.04751802292737,4.86864291332407,10.1294407096015,18.3330613282622,38.8389785558594,33.8862623959824,39.2622820858956,69.0087391331302,48.7504641445739,60.2232709111102,54.304458758629,64.2242740408446,44.8672474867931,0.554259570499814,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0.275936746304732,0,0.234423373184406,0,0,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0,5.25178315270594,0.712262414669021,0.651547837414304,0.329940245945071,2.65490276679926,1.45668381692989,0.302323556964751,0.943025398779491,1.47650946440386,0,2.84271122485043,3.99887102425256,2.49548164869305,2.21225730555071,1.05418608574999,1.03135543248187,1.70219802876894,0,0,0,0,0.713475270408282,0.164549020602121,1.2178597964584,0,0.847328283455281,0.661585194164886,0.8244312647074,0,0.120625849856312,0,0.164140899745061,8.45294426226567,0,0,0,0.185194527369712,0,0.27338845544205,0.228778173206523,0,0,0,2.86401185404534,0,0,0.432021363287205,0.209088296014469,2.18362563746178,1.75323650300267,5.86839535649885,1.83229159388821,11.4061176496778,0,1.69107881605257,0.747582730219894,0.330916980914195,0.777804753376191,0.258319646955462,0.844780627453891,1.05621514781179,1.0416350787516,0.629156066554265,0.483168241652012,0.576060012515731,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,1.54551675225752,4.129014459926,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,1.70174701947806,1.88651846365184,2.75765262675021,4.00044110042907,5.76898160268904,5.45562656306086,3.28506375292937,6.59046179714623,5.65879024158229,4.96299989590377,3.45735822986294,4.13535376480416,5.23923060411381,3.59241410429052,3.27945674788299,5.35711671044299,4.41596760403192,4.80016953339582,4.61437096014278,4.05341522910446,5.66851024866081,3.95259397744389,4.65380343404221,5.67076715905595,4.47218509444333,3.93831930152999,5.61142271657738,4.1522256343461,3.34915240076916,5.72923460437565,3.40861050609125,3.47231899766054,0,5.84829021113521,4.94203424311086,0,0.441182838239031,0|short_description=p2@Nr1h4}}
|EntrezGene=20186
|HGNC=
|MCL_coexpression_id=8
|UniProt=D3YTT2
|association_with_transcript=0bp_to_NM_001163504,uc007gsh.2_5end
|description=CAGE_peak_2_at_Nr1h4_5end
|id=chr10:88996336..88996380,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!1.20e-14!23;UBERON:0009856!1.20e-14!23;UBERON:0002107!3.07e-14!22;UBERON:0007499!3.07e-14!22;UBERON:0006925!3.07e-14!22;UBERON:0009497!3.07e-14!22;UBERON:0000015!3.07e-14!22;UBERON:0002423!3.07e-14!22;UBERON:0006235!3.07e-14!22;UBERON:0008835!3.07e-14!22;UBERON:0003894!3.07e-14!22;UBERON:0004161!3.07e-14!22;UBERON:0008836!3.07e-14!22;UBERON:0005256!7.66e-12!47;UBERON:0002365!1.29e-11!25;UBERON:0002330!1.29e-11!25;UBERON:0003914!1.41e-11!47;UBERON:0005172!8.30e-11!49;UBERON:0005173!8.30e-11!49;UBERON:0002417!8.30e-11!49;UBERON:0000916!8.30e-11!49;UBERON:0000160!1.16e-10!43;UBERON:0001007!2.47e-09!128;UBERON:0001555!2.47e-09!128;UBERON:0007026!2.47e-09!128;UBERON:0004119!3.93e-09!130;UBERON:0000925!3.93e-09!130;UBERON:0006595!3.93e-09!130;UBERON:0005409!4.29e-09!59;UBERON:0004921!6.30e-09!126;UBERON:0004185!6.30e-09!126;UBERON:0009569!6.37e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.66e-18,23;UBERON:0009856,3.66e-18,23;UBERON:0002107,1.21e-17,22;UBERON:0007499,1.21e-17,22;UBERON:0006925,1.21e-17,22;UBERON:0009497,1.21e-17,22;UBERON:0000015,1.21e-17,22;UBERON:0002423,1.21e-17,22;UBERON:0006235,1.21e-17,22;UBERON:0008835,1.21e-17,22;UBERON:0003894,1.21e-17,22;UBERON:0004161,1.21e-17,22;UBERON:0008836,1.21e-17,22;UBERON:0005256,1.45e-16,45;UBERON:0002365,2.32e-14,25;UBERON:0002330,2.32e-14,25;UBERON:0005172,1.41e-11,49;UBERON:0005173,1.41e-11,49;UBERON:0002417,1.41e-11,49;UBERON:0000916,1.41e-11,49;UBERON:0003104,1.83e-11,61;UBERON:0009142,1.83e-11,61;UBERON:0003914,5.03e-10,47;UBERON:0000160,6.42e-09,31;UBERON:0002100,2.93e-07,90;UBERON:0000949,4.18e-07,72;UBERON:0005177,6.22e-07,79
|phase1_expression=0,1.04692622291808,1.81999695755814,3.62957053568196,2.50447864973174,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,1.75991665072747,1.83527424853736,1.72269589234506,3.4460959692726,1.72376986148711,22.8028103347649,7.81293402255785,7.53883736228036,0,0,0,1.44425809875637,0.664938581433969,0.816677425049476,0,0,0,0,0,0,1.25896817975577,1.01376931219515,1.10128051297009,0,0,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,7.97504251711436,7.16333599846892,4.64104883049698,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,1.66597625333005,1.20914496170857,11.5945795480671,31.8356834483113,8.83962733820076,26.9851595818909,41.5856907166508,65.8599524033083,13.2017754923847,0.170430322578058,0,0,0,0,0,0,0,0,0,13.0169622879728,0.517875767294343,19.8912466346865,2.94925055502431,8.52503339273995,13.3756988408514,13.1128697280782,14.345822270556,17.2163230121655,9.64060374164058,0.86759614151947,0,0.161766849947409,0,0,5.59175283654366,0,0,10.9846533739694,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0.420883711772948,0,0,0,0.60281927134286,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0,0,0.617068451549513,0.697601834251224,0.268273401399619,1.63471479314037,1.15191894939436,0.32833492815819,0.810688095458557,1.60819986167866,1.53685080703735,1.34206418760372,0,0,6.60837565967596,1.58670339998127,0,0.232236671860439,0.644337306610467,6.05050573870028,7.33847544688072,16.3594038456801,8.0669940462567,11.8583247401288,11.8127548136127,15.1206918751275,11.8928093142663,6.29173586057955,9.29393614461185,4.97853183135918,0,0.685491075658373,0,0,0.969762435838129,0.911765658574141,2.71917109634306,2.65698266363284,3.767969468193,2.83813477020141,59.5869780445169,1.33476084572875,1.37591296579242,4.04751802292737,4.86864291332407,10.1294407096015,18.3330613282622,38.8389785558594,33.8862623959824,39.2622820858956,69.0087391331302,48.7504641445739,60.2232709111102,54.304458758629,64.2242740408446,44.8672474867931,0.554259570499814,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0.275936746304732,0,0.234423373184406,0,0,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0,5.25178315270594,0.712262414669021,0.651547837414304,0.329940245945071,2.65490276679926,1.45668381692989,0.302323556964751,0.943025398779491,1.47650946440386,0,2.84271122485043,3.99887102425256,2.49548164869305,2.21225730555071,1.05418608574999,1.03135543248187,1.70219802876894,0,0,0,0,0.713475270408282,0.164549020602121,1.2178597964584,0,0.847328283455281,0.661585194164886,0.8244312647074,0,0.120625849856312,0,0.164140899745061,8.45294426226567,0,0,0,0.185194527369712,0,0.27338845544205,0.228778173206523,0,0,0,2.86401185404534,0,0,0.432021363287205,0.209088296014469,2.18362563746178,1.75323650300267,5.86839535649885,1.83229159388821,11.4061176496778,0,1.69107881605257,0.747582730219894,0.330916980914195,0.777804753376191,0.258319646955462,0.844780627453891,1.05621514781179,1.0416350787516,0.629156066554265,0.483168241652012,0.576060012515731,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,1.54551675225752,4.129014459926,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,1.70174701947806,1.88651846365184,2.75765262675021,4.00044110042907,5.76898160268904,5.45562656306086,3.28506375292937,6.59046179714623,5.65879024158229,4.96299989590377,3.45735822986294,4.13535376480416,5.23923060411381,3.59241410429052,3.27945674788299,5.35711671044299,4.41596760403192,4.80016953339582,4.61437096014278,4.05341522910446,5.66851024866081,3.95259397744389,4.65380343404221,5.67076715905595,4.47218509444333,3.93831930152999,5.61142271657738,4.1522256343461,3.34915240076916,5.72923460437565,3.40861050609125,3.47231899766054,0,5.84829021113521,4.94203424311086,0,0.441182838239031,0
|short_description=p2@Nr1h4
}}

Revision as of 17:55, 12 September 2013

Short description:p2@Nr1h4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nr1h4_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_NM_001163504, uc007gsh.2_5end
EntrezGene:Nr1h4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Nr1h4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B922.80
Ileum epithelium, pool2.CNhs13232.10253-104C17.81
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.59
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F731.84
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C826.99
Mouse hepatocyte, donor6.CNhs13090.11822-124F441.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F665.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.02
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D719.89
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I113.38
adrenal gland, embryo E18.CNhs11026.1262-18F513.11
adrenal gland, neonate N00.CNhs11191.1311-23C114.35
adrenal gland, neonate N25.CNhs11223.1377-27I317.22
amnion, adult pregnant day17.5.CNhs10488.583-22A89.64
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H710.98
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F716.36
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E911.86
intestine, neonate N06.CNhs11102.688-20B811.81
intestine, neonate N07.CNhs11095.720-20F215.12
intestine, neonate N10.CNhs11098.755-23A511.89
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E39.29
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D52.72
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B259.59
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F510.13
liver, embryo E17.CNhs10510.481-18A318.33
liver, embryo E18.CNhs10579.499-43G438.84
liver, neonate N00.CNhs11117.641-24F433.89
liver, neonate N03.CNhs11123.1345-25G239.26
liver, neonate N06.CNhs11101.684-20A869.01
liver, neonate N07.CNhs11103.716-20H248.75
liver, neonate N10.CNhs11115.751-24B960.22
liver, neonate N20.CNhs11220.823-25A354.30
liver, neonate N25.CNhs11198.1368-26H164.22
liver, neonate N30.CNhs11106.1382-42D144.87
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I18.45
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A95.87
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I111.41
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum3.66e-1823
sac3.66e-1823
liver1.21e-1722
epithelial sac1.21e-1722
digestive gland1.21e-1722
epithelium of foregut-midgut junction1.21e-1722
anatomical boundary1.21e-1722
hepatobiliary system1.21e-1722
foregut-midgut junction1.21e-1722
hepatic diverticulum1.21e-1722
liver primordium1.21e-1722
septum transversum1.21e-1722
liver bud1.21e-1722
trunk mesenchyme1.45e-1645
exocrine gland2.32e-1425
exocrine system2.32e-1425
abdomen element1.41e-1149
abdominal segment element1.41e-1149
abdominal segment of trunk1.41e-1149
abdomen1.41e-1149
mesenchyme1.83e-1161
entire embryonic mesenchyme1.83e-1161
epithelial tube5.03e-1047
intestine6.42e-0931
trunk2.93e-0790
endocrine system4.18e-0772
trunk region element6.22e-0779







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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