FFCP PHASE1:Mm9::chr12:16807480..16807511,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=268527|HGNC=|MCL_coexpression_id=1101|UniProt=Q3UHK3|association_with_transcript=0bp_to_ENSMUST00000162112_5end|description=CAGE_peak_3_at_Greb1_5end|id=chr12:16807480..16807511,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,3.96e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!1.27e-09!26;UBERON:0000990!1.27e-09!26;UBERON:0003133!2.04e-08!24;UBERON:0000991!9.17e-08!18;UBERON:0005564!9.17e-08!18;UBERON:0004176!3.56e-07!17;UBERON:0009196!3.56e-07!17;UBERON:0009117!3.56e-07!17;UBERON:0002342!3.99e-07!10;UBERON:0005062!3.99e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0005156,6.42e-16,26;UBERON:0000990,6.42e-16,26;UBERON:0003133,1.48e-13,24;UBERON:0000991,8.26e-11,18;UBERON:0005564,8.26e-11,18;UBERON:0003101,3.10e-10,16;UBERON:0000079,3.10e-10,16;UBERON:0004176,1.05e-09,17;UBERON:0009196,1.05e-09,17;UBERON:0009117,1.05e-09,17;UBERON:0003135,3.87e-09,15;UBERON:0002369,9.40e-09,7;UBERON:0006858,9.40e-09,7;UBERON:0000473,2.90e-08,14;UBERON:0003064,3.80e-08,14;UBERON:0002410,3.96e-07,9|phase1_expression=0.160148847104794,0,0,0,1.00179145989269,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0,0,0.430761996159075,0.861884930743556,0.570070258369122,0.252030129759931,0.443461021310609,0,0,0,1.1554064790051,1.16364251750945,2.24586291888606,0,0,0,0,0,0,0.125896817975577,0.811015449756117,1.10128051297009,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.540023753326763,0.420649922702764,0.285650984403804,0.220868540951614,0.367472397644862,0.191690942036473,0,0,0,0,0.659431438650969,1.00636407962651,1.04182674111352,0,0,0,0,0,0.372798891650601,0.681535739998656,0.604572480854284,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,5.78924342352817,0.867426633830679,2.43572382649713,3.92046345335299,2.56228488939458,6.82014501387088,3.76999773989026,1.73036477414062,0,0,0.161766849947409,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0.125654352112864,0,0,0.41557608911912,0,0.203678727700633,0.373220911830279,1.26361379216837,0,0.910843100738926,0.459804208866946,1.0803727788321,1.20563854268572,1.56483948048054,0.640568601424249,0.749613796477831,0,3.44908788692548,1.89106080167819,0.879755620819744,0.657587197282725,0,0.348252166522167,0,1.99034266818493,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0.710234206755631,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0.264450566663544,1.06644125267617,1.62565670302307,1.54640953586512,1.4117846723634,1.33426826306922,1.33157938278791,0.949058123089023,0.329397909448022,1.00534083520108,0.198956472041151,1.16978452271472,0,1.08069024937347,0.597423819763102,0.569003702859245,1.37098215131675,2.25415471346161,0.203651327845314,0.581857461502877,1.47285221769669,0.126473074248515,0,0,0,0,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,1.89491411770485,0.977789858652155,0.169745085775188,0,0.502518772325447,0,0.390267295715598,0.472905432318573,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,1.89304931649754,0.390438744296638,1.50796378412959,1.43381278771531,1.33679204449436,2.83076530788832,1.61924280669958,2.04579100537918,0.790575555893047,0,3.83238230062325,0.890328018336276,1.46598263418218,2.96946221350564,0,1.21390318077491,1.51161778482376,0.188605079755898,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,4.76615448055303,0.540183282093931,0.258717367565509,0.428674070063185,0.177340233642274,0,0,0.304464949114599,0,0,1.98475558249466,0,0.484393280087717,0.180938774784468,0.119372344003136,0,0.582961673259701,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0.419854356970974,0,0,0.949007980743406,0.813277868507395,0.324016022465404,0.418176592028937,0,0,0.0826534557253359,0,0.777689839750757,0,0,2.0932316446157,1.98550188548517,4.083474955225,2.58319646955462,3.04121025883401,7.27614879603675,5.4685841634459,3.56521771047417,1.69108884578204,0.864090018773596,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.665957860122194,0.358855426437903,0.167884616364078,0,1.31377732815827,3.6630324853453,3.21552568618599,0,0,0,0,0,0,0,0,0,0,0,1.86817225651518,2.79317411380722,0.853668028770671,0.486213434136588,0.628839487883947,0,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.512201219238954,0.459483751644906,0.952587382566147,0.347652977834566,0,0,0.883193520806384,1.02860775715625,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.338458431566706,0,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0.818462086339379,0.464810523557898,0.192906610981141,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0|short_description=p3@Greb1}} | ||
|EntrezGene=268527 | |||
|HGNC= | |||
|MCL_coexpression_id=1101 | |||
|UniProt=Q3UHK3 | |||
|association_with_transcript=0bp_to_ENSMUST00000162112_5end | |||
|description=CAGE_peak_3_at_Greb1_5end | |||
|id=chr12:16807480..16807511,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.96e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.27e-09!26;UBERON:0000990!1.27e-09!26;UBERON:0003133!2.04e-08!24;UBERON:0000991!9.17e-08!18;UBERON:0005564!9.17e-08!18;UBERON:0004176!3.56e-07!17;UBERON:0009196!3.56e-07!17;UBERON:0009117!3.56e-07!17;UBERON:0002342!3.99e-07!10;UBERON:0005062!3.99e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,6.42e-16,26;UBERON:0000990,6.42e-16,26;UBERON:0003133,1.48e-13,24;UBERON:0000991,8.26e-11,18;UBERON:0005564,8.26e-11,18;UBERON:0003101,3.10e-10,16;UBERON:0000079,3.10e-10,16;UBERON:0004176,1.05e-09,17;UBERON:0009196,1.05e-09,17;UBERON:0009117,1.05e-09,17;UBERON:0003135,3.87e-09,15;UBERON:0002369,9.40e-09,7;UBERON:0006858,9.40e-09,7;UBERON:0000473,2.90e-08,14;UBERON:0003064,3.80e-08,14;UBERON:0002410,3.96e-07,9 | |||
|phase1_expression=0.160148847104794,0,0,0,1.00179145989269,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0,0,0.430761996159075,0.861884930743556,0.570070258369122,0.252030129759931,0.443461021310609,0,0,0,1.1554064790051,1.16364251750945,2.24586291888606,0,0,0,0,0,0,0.125896817975577,0.811015449756117,1.10128051297009,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.540023753326763,0.420649922702764,0.285650984403804,0.220868540951614,0.367472397644862,0.191690942036473,0,0,0,0,0.659431438650969,1.00636407962651,1.04182674111352,0,0,0,0,0,0.372798891650601,0.681535739998656,0.604572480854284,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,5.78924342352817,0.867426633830679,2.43572382649713,3.92046345335299,2.56228488939458,6.82014501387088,3.76999773989026,1.73036477414062,0,0,0.161766849947409,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0.125654352112864,0,0,0.41557608911912,0,0.203678727700633,0.373220911830279,1.26361379216837,0,0.910843100738926,0.459804208866946,1.0803727788321,1.20563854268572,1.56483948048054,0.640568601424249,0.749613796477831,0,3.44908788692548,1.89106080167819,0.879755620819744,0.657587197282725,0,0.348252166522167,0,1.99034266818493,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0.710234206755631,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0.264450566663544,1.06644125267617,1.62565670302307,1.54640953586512,1.4117846723634,1.33426826306922,1.33157938278791,0.949058123089023,0.329397909448022,1.00534083520108,0.198956472041151,1.16978452271472,0,1.08069024937347,0.597423819763102,0.569003702859245,1.37098215131675,2.25415471346161,0.203651327845314,0.581857461502877,1.47285221769669,0.126473074248515,0,0,0,0,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,1.89491411770485,0.977789858652155,0.169745085775188,0,0.502518772325447,0,0.390267295715598,0.472905432318573,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,1.89304931649754,0.390438744296638,1.50796378412959,1.43381278771531,1.33679204449436,2.83076530788832,1.61924280669958,2.04579100537918,0.790575555893047,0,3.83238230062325,0.890328018336276,1.46598263418218,2.96946221350564,0,1.21390318077491,1.51161778482376,0.188605079755898,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,4.76615448055303,0.540183282093931,0.258717367565509,0.428674070063185,0.177340233642274,0,0,0.304464949114599,0,0,1.98475558249466,0,0.484393280087717,0.180938774784468,0.119372344003136,0,0.582961673259701,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0.419854356970974,0,0,0.949007980743406,0.813277868507395,0.324016022465404,0.418176592028937,0,0,0.0826534557253359,0,0.777689839750757,0,0,2.0932316446157,1.98550188548517,4.083474955225,2.58319646955462,3.04121025883401,7.27614879603675,5.4685841634459,3.56521771047417,1.69108884578204,0.864090018773596,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.665957860122194,0.358855426437903,0.167884616364078,0,1.31377732815827,3.6630324853453,3.21552568618599,0,0,0,0,0,0,0,0,0,0,0,1.86817225651518,2.79317411380722,0.853668028770671,0.486213434136588,0.628839487883947,0,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.512201219238954,0.459483751644906,0.952587382566147,0.347652977834566,0,0,0.883193520806384,1.02860775715625,0.177475806159338,0.238436189947321,0.290692833264657,0.470546902076653,0.338458431566706,0,0,0.271608227691724,0,0.355905054372522,0.394017929502254,0.818462086339379,0.464810523557898,0.192906610981141,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p3@Greb1 | |||
}} |
Revision as of 22:34, 12 September 2013
Short description: | p3@Greb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Greb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1101 |
Association with transcript: | 0bp_to_ENSMUST00000162112_5end |
EntrezGene: | Greb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.96e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 6.42e-16 | 26 |
reproductive system | 6.42e-16 | 26 |
reproductive organ | 1.48e-13 | 24 |
gonad | 8.26e-11 | 18 |
gonad primordium | 8.26e-11 | 18 |
male organism | 3.10e-10 | 16 |
male reproductive system | 3.10e-10 | 16 |
external genitalia | 1.05e-09 | 17 |
indifferent external genitalia | 1.05e-09 | 17 |
indifferent gonad | 1.05e-09 | 17 |
male reproductive organ | 3.87e-09 | 15 |
adrenal gland | 9.40e-09 | 7 |
adrenal/interrenal gland | 9.40e-09 | 7 |
testis | 2.90e-08 | 14 |
intermediate mesoderm | 3.80e-08 | 14 |
autonomic nervous system | 3.96e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.