FFCP PHASE1:Mm9::chr13:8300741..8300746,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=93|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:8300741..8300746,+|id=chr13:8300741..8300746,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,2.41e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!9.18e-15!63;UBERON:0000955!4.93e-14!50;UBERON:0006238!4.93e-14!50;UBERON:0002616!5.15e-13!49;UBERON:0001049!1.31e-12!52;UBERON:0005068!1.31e-12!52;UBERON:0006241!1.31e-12!52;UBERON:0007135!1.31e-12!52;UBERON:0002346!1.97e-12!71;UBERON:0003075!1.97e-12!71;UBERON:0007284!1.97e-12!71;UBERON:0003056!1.47e-11!49;UBERON:0001017!2.81e-11!73;UBERON:0005743!2.81e-11!73;UBERON:0000073!1.01e-10!75;UBERON:0001016!1.01e-10!75;UBERON:0002020!7.58e-10!34;UBERON:0003080!2.52e-09!40;UBERON:0002021!4.60e-09!10;UBERON:0000411!4.60e-09!10;UBERON:0001950!4.60e-09!10;UBERON:0004121!7.10e-09!102;UBERON:0000924!7.10e-09!102;UBERON:0006601!7.10e-09!102;UBERON:0000153!1.01e-08!94;UBERON:0002780!1.19e-08!39;UBERON:0001890!1.19e-08!39;UBERON:0006240!1.19e-08!39;UBERON:0007811!2.82e-08!86;UBERON:0002619!5.36e-08!17;UBERON:0002791!3.07e-07!29;UBERON:0003528!3.07e-07!29;UBERON:0001893!3.07e-07!29;UBERON:0000956!4.21e-07!21;UBERON:0001869!4.21e-07!21;UBERON:0000203!4.21e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.64e-18,10;UBERON:0000411,4.64e-18,10;UBERON:0001950,4.64e-18,10;UBERON:0004684,2.41e-15,3;UBERON:0002275,2.41e-15,3;UBERON:0002619,8.14e-11,17;UBERON:0000956,7.87e-09,21;UBERON:0001869,7.87e-09,21;UBERON:0000203,7.87e-09,21;UBERON:0000073,2.30e-07,54;UBERON:0001017,2.35e-07,73;UBERON:0001016,3.72e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,2.20231761998777,1.53224805702225,0.46081959976873,0,0,0,0,0,0.45839474333043,0.883885756421003,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.376963056338593,0.347648640384553,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,0,0,0.229902104433473,0,0.60281927134286,0.204109497453984,0.512454881139399,0.749613796477831,0,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.820481806145422,0,0,0,0,0.215423397732799,0,0,0,0,0,0,3.53453448063988,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0.564751842617067,0.920650473014354,2.29158205375759,3.43706364687375,0,2.2661816921691,0.675022500231806,1.80128481289688,0.453142408984205,0,0,0,0.341467211508268,0,0,0,0.44449345560323,0.824140228955577,0,0.505394423527595,0,0.377252682772152,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0.579421629724277,0,0,0.735994600671987,1.02860775715625,0.532427418478012,0.238436189947321,0,0.376437521661322,0.0846146078916765,0.365855945745545,0.263069711437843,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr13:8300741..8300746,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=93 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:8300741..8300746,+ | |||
|id=chr13:8300741..8300746,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.41e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.18e-15!63;UBERON:0000955!4.93e-14!50;UBERON:0006238!4.93e-14!50;UBERON:0002616!5.15e-13!49;UBERON:0001049!1.31e-12!52;UBERON:0005068!1.31e-12!52;UBERON:0006241!1.31e-12!52;UBERON:0007135!1.31e-12!52;UBERON:0002346!1.97e-12!71;UBERON:0003075!1.97e-12!71;UBERON:0007284!1.97e-12!71;UBERON:0003056!1.47e-11!49;UBERON:0001017!2.81e-11!73;UBERON:0005743!2.81e-11!73;UBERON:0000073!1.01e-10!75;UBERON:0001016!1.01e-10!75;UBERON:0002020!7.58e-10!34;UBERON:0003080!2.52e-09!40;UBERON:0002021!4.60e-09!10;UBERON:0000411!4.60e-09!10;UBERON:0001950!4.60e-09!10;UBERON:0004121!7.10e-09!102;UBERON:0000924!7.10e-09!102;UBERON:0006601!7.10e-09!102;UBERON:0000153!1.01e-08!94;UBERON:0002780!1.19e-08!39;UBERON:0001890!1.19e-08!39;UBERON:0006240!1.19e-08!39;UBERON:0007811!2.82e-08!86;UBERON:0002619!5.36e-08!17;UBERON:0002791!3.07e-07!29;UBERON:0003528!3.07e-07!29;UBERON:0001893!3.07e-07!29;UBERON:0000956!4.21e-07!21;UBERON:0001869!4.21e-07!21;UBERON:0000203!4.21e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.64e-18,10;UBERON:0000411,4.64e-18,10;UBERON:0001950,4.64e-18,10;UBERON:0004684,2.41e-15,3;UBERON:0002275,2.41e-15,3;UBERON:0002619,8.14e-11,17;UBERON:0000956,7.87e-09,21;UBERON:0001869,7.87e-09,21;UBERON:0000203,7.87e-09,21;UBERON:0000073,2.30e-07,54;UBERON:0001017,2.35e-07,73;UBERON:0001016,3.72e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,2.20231761998777,1.53224805702225,0.46081959976873,0,0,0,0,0,0.45839474333043,0.883885756421003,0.427115042397309,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.376963056338593,0.347648640384553,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,0,0,0.229902104433473,0,0.60281927134286,0.204109497453984,0.512454881139399,0.749613796477831,0,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.820481806145422,0,0,0,0,0.215423397732799,0,0,0,0,0,0,3.53453448063988,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0.564751842617067,0.920650473014354,2.29158205375759,3.43706364687375,0,2.2661816921691,0.675022500231806,1.80128481289688,0.453142408984205,0,0,0,0.341467211508268,0,0,0,0.44449345560323,0.824140228955577,0,0.505394423527595,0,0.377252682772152,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0.579421629724277,0,0,0.735994600671987,1.02860775715625,0.532427418478012,0.238436189947321,0,0.376437521661322,0.0846146078916765,0.365855945745545,0.263069711437843,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr13:8300741..8300746,+ | |||
}} |
Revision as of 01:10, 13 September 2013
Short description: | p@chr13:8300741..8300746, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:8300741..8300746, + |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.41e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.64e-18 | 10 |
visual cortex | 4.64e-18 | 10 |
neocortex | 4.64e-18 | 10 |
raphe nuclei | 2.41e-15 | 3 |
reticular formation | 2.41e-15 | 3 |
regional part of cerebral cortex | 8.14e-11 | 17 |
cerebral cortex | 7.87e-09 | 21 |
cerebral hemisphere | 7.87e-09 | 21 |
pallium | 7.87e-09 | 21 |
regional part of nervous system | 2.30e-07 | 54 |
central nervous system | 2.35e-07 | 73 |
nervous system | 3.72e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.