FFCP PHASE1:Mm9::chr15:82210702..82210711,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56448|HGNC=|MCL_coexpression_id=8|UniProt=Q9JKY7|association_with_transcript=-12bp_to_ENSMUST00000023083,ENSMUST00000165902,NM_001163472,NM_019823,uc007wzd.2,uc007wze.2_5end|description=CAGE_peak_3_at_Cyp2d22_5end|id=chr15:82210702..82210711,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.87e-08,5;CL:0002610,5.18e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!2.13e-10!47;UBERON:0002107!4.16e-10!22;UBERON:0007499!4.16e-10!22;UBERON:0006925!4.16e-10!22;UBERON:0009497!4.16e-10!22;UBERON:0000015!4.16e-10!22;UBERON:0002423!4.16e-10!22;UBERON:0006235!4.16e-10!22;UBERON:0008835!4.16e-10!22;UBERON:0003894!4.16e-10!22;UBERON:0004161!4.16e-10!22;UBERON:0008836!4.16e-10!22;UBERON:0002365!3.00e-09!25;UBERON:0002330!3.00e-09!25;UBERON:0009854!3.75e-09!23;UBERON:0009856!3.75e-09!23;UBERON:0005172!1.96e-07!49;UBERON:0005173!1.96e-07!49;UBERON:0002417!1.96e-07!49;UBERON:0000916!1.96e-07!49;UBERON:0005256!3.17e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.56e-19,22;UBERON:0007499,1.56e-19,22;UBERON:0006925,1.56e-19,22;UBERON:0009497,1.56e-19,22;UBERON:0000015,1.56e-19,22;UBERON:0002423,1.56e-19,22;UBERON:0006235,1.56e-19,22;UBERON:0008835,1.56e-19,22;UBERON:0003894,1.56e-19,22;UBERON:0004161,1.56e-19,22;UBERON:0008836,1.56e-19,22;UBERON:0009854,1.57e-18,23;UBERON:0009856,1.57e-18,23;UBERON:0002365,9.02e-17,25;UBERON:0002330,9.02e-17,25;UBERON:0005256,7.99e-12,45;UBERON:0005172,1.42e-10,49;UBERON:0005173,1.42e-10,49;UBERON:0002417,1.42e-10,49;UBERON:0000916,1.42e-10,49;UBERON:0003914,9.31e-10,47;UBERON:0003104,9.86e-09,61;UBERON:0009142,9.86e-09,61;UBERON:0002368,7.51e-08,60;UBERON:0009569,9.15e-08,66;UBERON:0000949,1.25e-07,72;UBERON:0005177,1.81e-07,79;UBERON:0004684,5.18e-07,3;UBERON:0002275,5.18e-07,3;UBERON:0002530,6.00e-07,65;UBERON:0003929,8.38e-07,55;UBERON:0002100,9.11e-07,90|phase1_expression=0,0.697950815278722,0.909998478779072,1.20985684522732,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.262261207256992,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,1.29228598847722,0.430942465371778,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0.183546752161682,0,2.8343270329458,0.659058548203415,1.74986909166855,1.1198913730029,0,0.167782606057736,0,0,0.257259436035947,0.573066879877513,1.03134418455488,0,0,0,1.0165335962074,0,0,0,0,0.898800331555214,1.15265491596466,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.287536413054709,0,1.10115880999389,1.0214987046815,1.53606533256243,0,0,0,0.837548997004143,0,0.763991238884051,0,0.142371680799103,0,0,0,1.73918693221007,1.72084775396277,0.679971333707751,2.69851595818909,4.54843492213368,4.03224198387602,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,2.2836775943812,0.517875767294343,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,2.3517741427141,1.0053327306374,1.23597483867187,1.15679485535929,0.884610551949874,0.323533699894818,0,0,0,1.46390398505774,0,0.510914110417183,0,0,0,0.449371918214468,0.457500602818626,0.125654352112864,0.695297280769106,0,0.20778804455956,0.162241263067758,0.712875546952214,0.124406970610093,0.252722758433675,0.420883711772948,0.260240885925407,0,0.360124259610698,0.30140963567143,0.544291993210623,0.12811372028485,0.374806898238915,1.29351685369508,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0.697601834251224,0.804820204198858,0.233530684734339,0.329119699826961,0.656669856316381,0.486412857275134,0.730999937126662,0.439100230582101,0.671032093801859,0,0.102904612379284,2.31293148088659,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.667134131534611,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0.19496408711912,0,1.08069024937347,0.796565093017469,0,0,1.1270773567308,0,0.581857461502877,0.350679099451593,0.379419222745544,0.590440591918409,0.156998727841375,0.493588655687202,4.44678940630723,0.333690211432188,0.589676985339609,0,0.202860121388503,0.241177159752417,1.01850340712568,0.863088412352432,0.486405680325106,1.64736847912849,10.0637744569148,3.34926852901653,3.12037673114561,2.02063102357689,4.4849353380478,5.30687873499704,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0,0.167506257441816,0.476087281772027,0,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,1.03610989119537,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0.642202359951168,0.703270119553219,0.163934945376675,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.851640511249612,0.890328018336276,0.325773918707152,0.824850614862677,0,0,0,0,0.590603785761546,0.307435147943927,0,0,0,0.316036757935816,1.05418608574999,1.03135543248187,1.02131881726136,0,0.388076051348264,0.214337035031592,0.532020700926821,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0.492422699235184,0.874442509889552,0.741701208042039,0,0,0,0,0.136694227721025,0.457556346413045,0,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0.218362563746178,0.809186078308924,0.495920734352016,0,1.29614973291793,0,0,0.299033092087958,0.165458490457098,0.972255941720238,0.387479470433193,0.168956125490778,0.234714477291508,0.39061315453185,0.104859344425711,0.724752362478018,0.288030006257865,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.360586348559907,0,0,0,0.100826185136841,0,0,0.350630706544707,0.226730383615211,0,0.0897138566094757,0,0.579568782096571,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0.853668028770671,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.192075457214608,0.287177344778066,0.476293691283074,0.579421629724277,0.578727661391115,0,0.147198920134397,0.342869252385415,0,0.715308569841963,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0,0,0,0.355905054372522,0.197008964751127,0,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.463735671240843|short_description=p3@Cyp2d22}} | ||
|EntrezGene=56448 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q9JKY7 | |||
|association_with_transcript=-12bp_to_ENSMUST00000023083,ENSMUST00000165902,NM_001163472,NM_019823,uc007wzd.2,uc007wze.2_5end | |||
|description=CAGE_peak_3_at_Cyp2d22_5end | |||
|id=chr15:82210702..82210711,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.87e-08,5;CL:0002610,5.18e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.13e-10!47;UBERON:0002107!4.16e-10!22;UBERON:0007499!4.16e-10!22;UBERON:0006925!4.16e-10!22;UBERON:0009497!4.16e-10!22;UBERON:0000015!4.16e-10!22;UBERON:0002423!4.16e-10!22;UBERON:0006235!4.16e-10!22;UBERON:0008835!4.16e-10!22;UBERON:0003894!4.16e-10!22;UBERON:0004161!4.16e-10!22;UBERON:0008836!4.16e-10!22;UBERON:0002365!3.00e-09!25;UBERON:0002330!3.00e-09!25;UBERON:0009854!3.75e-09!23;UBERON:0009856!3.75e-09!23;UBERON:0005172!1.96e-07!49;UBERON:0005173!1.96e-07!49;UBERON:0002417!1.96e-07!49;UBERON:0000916!1.96e-07!49;UBERON:0005256!3.17e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.56e-19,22;UBERON:0007499,1.56e-19,22;UBERON:0006925,1.56e-19,22;UBERON:0009497,1.56e-19,22;UBERON:0000015,1.56e-19,22;UBERON:0002423,1.56e-19,22;UBERON:0006235,1.56e-19,22;UBERON:0008835,1.56e-19,22;UBERON:0003894,1.56e-19,22;UBERON:0004161,1.56e-19,22;UBERON:0008836,1.56e-19,22;UBERON:0009854,1.57e-18,23;UBERON:0009856,1.57e-18,23;UBERON:0002365,9.02e-17,25;UBERON:0002330,9.02e-17,25;UBERON:0005256,7.99e-12,45;UBERON:0005172,1.42e-10,49;UBERON:0005173,1.42e-10,49;UBERON:0002417,1.42e-10,49;UBERON:0000916,1.42e-10,49;UBERON:0003914,9.31e-10,47;UBERON:0003104,9.86e-09,61;UBERON:0009142,9.86e-09,61;UBERON:0002368,7.51e-08,60;UBERON:0009569,9.15e-08,66;UBERON:0000949,1.25e-07,72;UBERON:0005177,1.81e-07,79;UBERON:0004684,5.18e-07,3;UBERON:0002275,5.18e-07,3;UBERON:0002530,6.00e-07,65;UBERON:0003929,8.38e-07,55;UBERON:0002100,9.11e-07,90 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,1.20985684522732,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.262261207256992,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,1.29228598847722,0.430942465371778,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0.183546752161682,0,2.8343270329458,0.659058548203415,1.74986909166855,1.1198913730029,0,0.167782606057736,0,0,0.257259436035947,0.573066879877513,1.03134418455488,0,0,0,1.0165335962074,0,0,0,0,0.898800331555214,1.15265491596466,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.287536413054709,0,1.10115880999389,1.0214987046815,1.53606533256243,0,0,0,0.837548997004143,0,0.763991238884051,0,0.142371680799103,0,0,0,1.73918693221007,1.72084775396277,0.679971333707751,2.69851595818909,4.54843492213368,4.03224198387602,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,2.2836775943812,0.517875767294343,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,2.3517741427141,1.0053327306374,1.23597483867187,1.15679485535929,0.884610551949874,0.323533699894818,0,0,0,1.46390398505774,0,0.510914110417183,0,0,0,0.449371918214468,0.457500602818626,0.125654352112864,0.695297280769106,0,0.20778804455956,0.162241263067758,0.712875546952214,0.124406970610093,0.252722758433675,0.420883711772948,0.260240885925407,0,0.360124259610698,0.30140963567143,0.544291993210623,0.12811372028485,0.374806898238915,1.29351685369508,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0.308534225774757,0.697601834251224,0.804820204198858,0.233530684734339,0.329119699826961,0.656669856316381,0.486412857275134,0.730999937126662,0.439100230582101,0.671032093801859,0,0.102904612379284,2.31293148088659,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.667134131534611,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0.19496408711912,0,1.08069024937347,0.796565093017469,0,0,1.1270773567308,0,0.581857461502877,0.350679099451593,0.379419222745544,0.590440591918409,0.156998727841375,0.493588655687202,4.44678940630723,0.333690211432188,0.589676985339609,0,0.202860121388503,0.241177159752417,1.01850340712568,0.863088412352432,0.486405680325106,1.64736847912849,10.0637744569148,3.34926852901653,3.12037673114561,2.02063102357689,4.4849353380478,5.30687873499704,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0,0.167506257441816,0.476087281772027,0,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,1.03610989119537,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0.642202359951168,0.703270119553219,0.163934945376675,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.851640511249612,0.890328018336276,0.325773918707152,0.824850614862677,0,0,0,0,0.590603785761546,0.307435147943927,0,0,0,0.316036757935816,1.05418608574999,1.03135543248187,1.02131881726136,0,0.388076051348264,0.214337035031592,0.532020700926821,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0.492422699235184,0.874442509889552,0.741701208042039,0,0,0,0,0.136694227721025,0.457556346413045,0,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0.218362563746178,0.809186078308924,0.495920734352016,0,1.29614973291793,0,0,0.299033092087958,0.165458490457098,0.972255941720238,0.387479470433193,0.168956125490778,0.234714477291508,0.39061315453185,0.104859344425711,0.724752362478018,0.288030006257865,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.360586348559907,0,0,0,0.100826185136841,0,0,0.350630706544707,0.226730383615211,0,0.0897138566094757,0,0.579568782096571,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0.853668028770671,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0.192075457214608,0.287177344778066,0.476293691283074,0.579421629724277,0.578727661391115,0,0.147198920134397,0.342869252385415,0,0.715308569841963,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0,0,0,0.355905054372522,0.197008964751127,0,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.463735671240843 | |||
|short_description=p3@Cyp2d22 | |||
}} |
Revision as of 11:21, 13 September 2013
Short description: | p3@Cyp2d22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cyp2d22_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | -12bp_to_ENSMUST00000023083, ENSMUST00000165902, NM_001163472, NM_019823, uc007wzd.2, uc007wze.2_5end |
EntrezGene: | Cyp2d22 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.87e-08 | 5 |
raphe nuclei neuron | 5.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 1.56e-19 | 22 |
epithelial sac | 1.56e-19 | 22 |
digestive gland | 1.56e-19 | 22 |
epithelium of foregut-midgut junction | 1.56e-19 | 22 |
anatomical boundary | 1.56e-19 | 22 |
hepatobiliary system | 1.56e-19 | 22 |
foregut-midgut junction | 1.56e-19 | 22 |
hepatic diverticulum | 1.56e-19 | 22 |
liver primordium | 1.56e-19 | 22 |
septum transversum | 1.56e-19 | 22 |
liver bud | 1.56e-19 | 22 |
digestive tract diverticulum | 1.57e-18 | 23 |
sac | 1.57e-18 | 23 |
exocrine gland | 9.02e-17 | 25 |
exocrine system | 9.02e-17 | 25 |
trunk mesenchyme | 7.99e-12 | 45 |
abdomen element | 1.42e-10 | 49 |
abdominal segment element | 1.42e-10 | 49 |
abdominal segment of trunk | 1.42e-10 | 49 |
abdomen | 1.42e-10 | 49 |
epithelial tube | 9.31e-10 | 47 |
mesenchyme | 9.86e-09 | 61 |
entire embryonic mesenchyme | 9.86e-09 | 61 |
endocrine gland | 7.51e-08 | 60 |
subdivision of trunk | 9.15e-08 | 66 |
endocrine system | 1.25e-07 | 72 |
trunk region element | 1.81e-07 | 79 |
raphe nuclei | 5.18e-07 | 3 |
reticular formation | 5.18e-07 | 3 |
gland | 6.00e-07 | 65 |
gut epithelium | 8.38e-07 | 55 |
trunk | 9.11e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.