FFCP PHASE1:Mm9::chr4:135525988..135526004,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=204|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:135525988..135526004,-|id=chr4:135525988..135526004,-|ontology_enrichment_celltype=CL:0002453!2.99e-11!8;CL:0000333!7.76e-09!10;CL:0000095!7.76e-09!10;CL:0000243!7.76e-09!10;CL:0000123!7.76e-09!10;CL:0000125!7.76e-09!10;CL:0000030!7.76e-09!10;CL:0000339!7.76e-09!10;CL:0000128!6.93e-07!6;CL:0000126!6.93e-07!6;CL:0000127!6.93e-07!6|ontology_enrichment_celltype_v019_2=CL:0000878,2.75e-44,2;CL:0000129,2.75e-44,2;CL:0002453,3.49e-25,8;CL:0002194,8.43e-23,4;CL:0000766,8.43e-23,4;CL:0000234,8.43e-23,4;CL:0000576,8.43e-23,4;CL:0000235,8.43e-23,4;CL:0000864,8.43e-23,4;CL:0002009,8.43e-23,4;CL:0000040,8.43e-23,4;CL:0000559,8.43e-23,4;CL:0000333,2.31e-20,10;CL:0000095,2.31e-20,10;CL:0000243,2.31e-20,10;CL:0000123,2.31e-20,10;CL:0000125,2.31e-20,10;CL:0000030,2.31e-20,10;CL:0000339,2.31e-20,10;CL:0000473,1.55e-13,7;CL:0000557,1.55e-13,7;CL:0000839,8.98e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.02e-08!73;UBERON:0005743!1.02e-08!73;UBERON:0000073!2.31e-08!75;UBERON:0001016!2.31e-08!75|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.777719596297134,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49800055259202,14.6002956022191,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0.0914876436024097,0,0,0,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0,0,0,0.41557608911912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21703828199926,0,0,0,0,0,0,0.195133647857799,0,0,0,0.491589944147214,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0|short_description=p@chr4:135525988..135526004,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=204 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:135525988..135526004,- | |||
|id=chr4:135525988..135526004,- | |||
|ontology_enrichment_celltype=CL:0002453!2.99e-11!8;CL:0000333!7.76e-09!10;CL:0000095!7.76e-09!10;CL:0000243!7.76e-09!10;CL:0000123!7.76e-09!10;CL:0000125!7.76e-09!10;CL:0000030!7.76e-09!10;CL:0000339!7.76e-09!10;CL:0000128!6.93e-07!6;CL:0000126!6.93e-07!6;CL:0000127!6.93e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,2.75e-44,2;CL:0000129,2.75e-44,2;CL:0002453,3.49e-25,8;CL:0002194,8.43e-23,4;CL:0000766,8.43e-23,4;CL:0000234,8.43e-23,4;CL:0000576,8.43e-23,4;CL:0000235,8.43e-23,4;CL:0000864,8.43e-23,4;CL:0002009,8.43e-23,4;CL:0000040,8.43e-23,4;CL:0000559,8.43e-23,4;CL:0000333,2.31e-20,10;CL:0000095,2.31e-20,10;CL:0000243,2.31e-20,10;CL:0000123,2.31e-20,10;CL:0000125,2.31e-20,10;CL:0000030,2.31e-20,10;CL:0000339,2.31e-20,10;CL:0000473,1.55e-13,7;CL:0000557,1.55e-13,7;CL:0000839,8.98e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.02e-08!73;UBERON:0005743!1.02e-08!73;UBERON:0000073!2.31e-08!75;UBERON:0001016!2.31e-08!75 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.777719596297134,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49800055259202,14.6002956022191,0,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0.0914876436024097,0,0,0,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0,0,0,0.41557608911912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21703828199926,0,0,0,0,0,0,0.195133647857799,0,0,0,0.491589944147214,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr4:135525988..135526004,- | |||
}} |
Revision as of 04:07, 14 September 2013
Short description: | p@chr4:135525988..135526004, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:135525988..135526004, - |
Coexpression cluster: | MCL_coexpression_mm9:204 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 2.75e-44 | 2 |
microglial cell | 2.75e-44 | 2 |
oligodendrocyte precursor cell | 3.49e-25 | 8 |
monopoietic cell | 8.43e-23 | 4 |
myeloid leukocyte | 8.43e-23 | 4 |
phagocyte | 8.43e-23 | 4 |
monocyte | 8.43e-23 | 4 |
macrophage | 8.43e-23 | 4 |
tissue-resident macrophage | 8.43e-23 | 4 |
macrophage dendritic cell progenitor | 8.43e-23 | 4 |
monoblast | 8.43e-23 | 4 |
promonocyte | 8.43e-23 | 4 |
migratory neural crest cell | 2.31e-20 | 10 |
neuron associated cell | 2.31e-20 | 10 |
glial cell (sensu Vertebrata) | 2.31e-20 | 10 |
neuron associated cell (sensu Vertebrata) | 2.31e-20 | 10 |
glial cell | 2.31e-20 | 10 |
glioblast | 2.31e-20 | 10 |
glioblast (sensu Vertebrata) | 2.31e-20 | 10 |
defensive cell | 1.55e-13 | 7 |
granulocyte monocyte progenitor cell | 1.55e-13 | 7 |
myeloid lineage restricted progenitor cell | 8.98e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.